| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is epsH [H]
Identifier: 222150904
GI number: 222150904
Start: 703939
End: 705045
Strand: Direct
Name: epsH [H]
Synonym: MCCL_0654
Alternate gene names: 222150904
Gene position: 703939-705045 (Clockwise)
Preceding gene: 222150903
Following gene: 222150905
Centisome position: 33.48
GC content: 27.73
Gene sequence:
>1107_bases ATGAAGATATCTATTATAATACCAATATATAATCAGGAAGAATATATCGTCGATACTATTATATCTGTTAAAAATCAAAC ATTTAAAAACTTTGAATGTATATTAATCAATGATGGTTCAACAGATGATTCACAAAAAATTGTAGAACGTGAAATTATCG ATGACAGCAGATTTAAACTTTATAGCCGAGAAAATCAAGGCGTTAGTGCAACTAGAAATTATGGTATTGAGATATCATCA GGGGATTATATCTATTTTATCGATGGCGATGATACAATCCCTATAGATGCTATGCAAAAACTTTATACAGCTGCACTTGA AAAGGATGCTGATATCGTTATTGGGAAGATGGTTCACAAAATAAATGGTCAAGATAAAGAAATTTCTACCTACCTGTTAG ATGGGGTTTATAAAGGTGGGTATAAAACATTAGAAGAAAATCCTGAAATCCTGCACTCTATTGGACCGACCGCCAAGCTG TTTAAACGAAATTTAATACGTGATTTATTGTTTCCCATTAATCTAAAATTTGCTGAAGAACATGAATTTATTGTTGCTGC ATATGTGAAAAGTAAGGTTATCTATACAATTGAAGATGTATCTTATTACTATCATATTCGTGAGCAGAATAACTCTGCAA CTCAGACGATTAATAATAATGTGAAGGAGTACATGATGAATTTAATTGAATCACATATTAAAGTGTATTCAATTTTAGAA CAAAATAAACTCCATAAAGCATTAAAGTTCTATGGCTATAGAATCACAAATTATATAATGTTTCCATTATTATTACAGGC TGCTCAAAATAACCAACTAATTGAAATAACTAAAATAATAGATGATTATTTAAATACTTCTGCTGTAAAGACGGGTGTTG ATAAAAATAGAATCAAGGAAATATATTTGTATCAGGTGATTAATAATTTAGATTACACAGGATTCATTAAACAAAAACCT TACTTTCAAATGGTTCATAAACATATTAATACACATAACATTAATAAAATGTTTCCTGATAGAGTTAATTTTTATTCGAC AAAGATGTGTATTAGAATTAAAATAATCACGAAAAAGATATATAGAAAAATTAAAATAAATATATAA
Upstream 100 bases:
>100_bases ACCAAATGAAAAATTGAATCAAAGATGGAATGAGTACAATAATGGAGATGCTACAAATCAACTCATAAAGTTTATAGATG AAGAAGGTTAGGGATTTAAC
Downstream 100 bases:
>100_bases ATTAAGGAGCAGTATGATTAATATAGTGAGAATAGAGAAAAATGATAAATGTCTATCCATCTTTGTTAATTATTCATTGC CATGCAATATAAGATGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKISIIIPIYNQEEYIVDTIISVKNQTFKNFECILINDGSTDDSQKIVEREIIDDSRFKLYSRENQGVSATRNYGIEISS GDYIYFIDGDDTIPIDAMQKLYTAALEKDADIVIGKMVHKINGQDKEISTYLLDGVYKGGYKTLEENPEILHSIGPTAKL FKRNLIRDLLFPINLKFAEEHEFIVAAYVKSKVIYTIEDVSYYYHIREQNNSATQTINNNVKEYMMNLIESHIKVYSILE QNKLHKALKFYGYRITNYIMFPLLLQAAQNNQLIEITKIIDDYLNTSAVKTGVDKNRIKEIYLYQVINNLDYTGFIKQKP YFQMVHKHINTHNINKMFPDRVNFYSTKMCIRIKIITKKIYRKIKINI
Sequences:
>Translated_368_residues MKISIIIPIYNQEEYIVDTIISVKNQTFKNFECILINDGSTDDSQKIVEREIIDDSRFKLYSRENQGVSATRNYGIEISS GDYIYFIDGDDTIPIDAMQKLYTAALEKDADIVIGKMVHKINGQDKEISTYLLDGVYKGGYKTLEENPEILHSIGPTAKL FKRNLIRDLLFPINLKFAEEHEFIVAAYVKSKVIYTIEDVSYYYHIREQNNSATQTINNNVKEYMMNLIESHIKVYSILE QNKLHKALKFYGYRITNYIMFPLLLQAAQNNQLIEITKIIDDYLNTSAVKTGVDKNRIKEIYLYQVINNLDYTGFIKQKP YFQMVHKHINTHNINKMFPDRVNFYSTKMCIRIKIITKKIYRKIKINI >Mature_368_residues MKISIIIPIYNQEEYIVDTIISVKNQTFKNFECILINDGSTDDSQKIVEREIIDDSRFKLYSRENQGVSATRNYGIEISS GDYIYFIDGDDTIPIDAMQKLYTAALEKDADIVIGKMVHKINGQDKEISTYLLDGVYKGGYKTLEENPEILHSIGPTAKL FKRNLIRDLLFPINLKFAEEHEFIVAAYVKSKVIYTIEDVSYYYHIREQNNSATQTINNNVKEYMMNLIESHIKVYSILE QNKLHKALKFYGYRITNYIMFPLLLQAAQNNQLIEITKIIDDYLNTSAVKTGVDKNRIKEIYLYQVINNLDYTGFIKQKP YFQMVHKHINTHNINKMFPDRVNFYSTKMCIRIKIITKKIYRKIKINI
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=112, Percent_Identity=38.3928571428571, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1787259, Length=97, Percent_Identity=34.020618556701, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 43082; Mature: 43082
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISIIIPIYNQEEYIVDTIISVKNQTFKNFECILINDGSTDDSQKIVEREIIDDSRFKL CEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEE YSRENQGVSATRNYGIEISSGDYIYFIDGDDTIPIDAMQKLYTAALEKDADIVIGKMVHK EECCCCCCCCCCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH INGQDKEISTYLLDGVYKGGYKTLEENPEILHSIGPTAKLFKRNLIRDLLFPINLKFAEE HCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECC HEFIVAAYVKSKVIYTIEDVSYYYHIREQNNSATQTINNNVKEYMMNLIESHIKVYSILE CCEEEEEEECCCEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNKLHKALKFYGYRITNYIMFPLLLQAAQNNQLIEITKIIDDYLNTSAVKTGVDKNRIKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCHHHHHCCCCHHHHHH IYLYQVINNLDYTGFIKQKPYFQMVHKHINTHNINKMFPDRVNFYSTKMCIRIKIITKKI HHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEHHHH YRKIKINI HHHEECCC >Mature Secondary Structure MKISIIIPIYNQEEYIVDTIISVKNQTFKNFECILINDGSTDDSQKIVEREIIDDSRFKL CEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEE YSRENQGVSATRNYGIEISSGDYIYFIDGDDTIPIDAMQKLYTAALEKDADIVIGKMVHK EECCCCCCCCCCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH INGQDKEISTYLLDGVYKGGYKTLEENPEILHSIGPTAKLFKRNLIRDLLFPINLKFAEE HCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECC HEFIVAAYVKSKVIYTIEDVSYYYHIREQNNSATQTINNNVKEYMMNLIESHIKVYSILE CCEEEEEEECCCEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNKLHKALKFYGYRITNYIMFPLLLQAAQNNQLIEITKIIDDYLNTSAVKTGVDKNRIKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCHHHHHCCCCHHHHHH IYLYQVINNLDYTGFIKQKPYFQMVHKHINTHNINKMFPDRVNFYSTKMCIRIKIITKKI HHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEHHHH YRKIKINI HHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]