| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is ggaB [H]
Identifier: 222150898
GI number: 222150898
Start: 696813
End: 699452
Strand: Direct
Name: ggaB [H]
Synonym: MCCL_0648
Alternate gene names: 222150898
Gene position: 696813-699452 (Clockwise)
Preceding gene: 222150897
Following gene: 222150899
Centisome position: 33.14
GC content: 27.95
Gene sequence:
>2640_bases ATGAAAAAATTTAAATTTAGTATTATTATGCCAATATATAATGTAGAGAAATACCTAGAAGAAGCTATACTGAGTGTGGT AAACCAAACGATTGGATTCGAAGACAATATTCAGCTGGTATTGGTTAATGATGAGACTCCAGATAACTCAGTTTCAATAA TAAAAAAATATCAATCTCTTTATCCTGAAAATGTAGTTTTTGTTGATAAAAAAAATGGTGGCGTTAGTAGTGCAAGAAAT GCTGGGATTGAAGCGGCAACAGGTGAATACATTCAATGCTTAGATCCTGATGATATGCTTTCTGAAAATACGTTAGAAGC TGTATATCAATTTTTTGACGAAAAAAAAGCAGAAATAGATTTAGTTGCAATTCCAATAAAAATGTTTGAAGCGATGAGTG GGAATCATGTACTAAATAGAAAGTTTAATCAAACAAGAATCATTGATATTTATGATCAATATAATCTTATATTAATGCAT GCCGCATCTACTTACGTAAAAAGAGAAGTGGCGAAACAGTTTAAGTTTGATGAAACATGTAAAATCGGTGAAGACGCTAA ATATTCTACAAGTATTATTTTGGAATCGGGTAGGTATGGAGTTGTTAAAGACGCTGCCTATATGTATCGCGTAAGGGAAG ATGGTAGCAGTGCAATCCAAACAATGGAAGAAAACGGTAATTGGTATAATCATACATTAGAAAGATTTAGTTTAGATTTA CTAAATATTACTATAGAAAAGTTAGGGTTTATTCCAAAATATGTACAGAATATTATTATGTACGATTTGAAATTCAAGTT TAGAGTATTAGACTGTAATTCTACTCCGCTAACGCAAGAAGAATATGAGGAATTTAAAGAAAATATTAAGAAAACTTTGC AATTTATAGATGATGATATAATTATATCTACTAAGTTCAGCCAATTGCATAAGAAGCGTGCGCTAATGATGAAGAACGAG TATGCAGGTTTAAATCCTTTTAAAGTTATTGAAGGGAAATCAAATGTGTATTTAATGTATAAGAATACATTTTTGAATAA GTTGACAAAAGAAGCAGTAGATGTCGAGATTGTTAATATTAAAGATGATAATTTGATTATTGAAGGTGGGTTCAGAAGCT TTGCAAGTATCGAAAATTTTGAAATTATCGCTAAAGTAGGAAATGGACAATTTCCATGTAAATTGTTTAGAAGAGCAAAT GAAGATAGTGTTTCATTTGATGAAATTACCCAGAAAAAATATGGATTTACTTTAGAAATCCCCAAACACTTCGTGACTAA TAACGAAATATCATTTTATTTTAAATCAGATAAATCATTTGTTAAGTTATTAACAAATACATTAAGATTTTCAAAATTAA ATAAAAAAGAGAAAACAGCGTATGCTGTAATTGAAGACTTATTATATTACATAGAAAATAATAAGTTGATTTTTAAAAAA TATAGTGTCAAGGAACACACTAAAAAAGAAATAGAAAAAATGAAGTTTTTAATGAAAAAGGGTAAACCTGGTTATAAGGC TGTGTTATTTAGAACAGTACACCATGCACTTAATACTTTAAAGAAAAAAGATATATGGCTAATGCATGACAGAATCAATA AAGGTGATGATAATGCACAAGCATTGCTTGAATATGCTAATCAAAAAAATGATAATATTAAGAAATATTTTATTGTTCGT AAAAATACAGATACTTATACTACATTAAAATCAAATGGCTATAATGTTGTTGGTTATGGAAGTTATAAACATAAATTATT GCATCTATTATCAGATAAGATTATCTCCAGCCATATTGATGAATGGGTTTTAAACCCTTTTGGAAGCACAATCGTATATT ATCAAGATTTATTTAAATTTAAATTAGTATTCTTACAGCACGGTGTGACTATGGTAGATCATTCTAATTGGTTTAATAAA TTTAGTAAGAATATTGACAAACTCATTACCTCGTCAAGGTTAGAATATAATTCAATGTTAACAAATAATTATTATTATAC AGAGGATGAAGTTAAATTAACGGGTATGCCTAGGTTTGATAAATTAACTTCAGATTCAGATAAAAAGATTTTGTTTATGC CGACTTGGAGAAAACATTTAGTTAGTACGACGCGAGATTCTGAAGGTAATAGATTATATAATGACCATTTTAAAGATACG GAATATTTTAATAAAATCAATGAAGTAATTCAAGACAAACAATTGATGGATTTATTAGAGGAACATGGATATGAATTATA TTTCTTCCCACATCCAGATATTAGAACTCAAATCAAAGACTTTACACCTGACAATAGAGTAGTTATACCAAATTTTGATA CGAGCTACCAAGATTTATTTAAAGAAGGATCAATATTAATAACAGATTTTTCAAGTGTTCACTTTGATTTCAGTTACTGT AAAAAACCTGTATTATATTATCAATTTGATGAACATCATTTCGAAAAAAGTTATTTTTCATTTGAAAACCATGGTTTTGG ACCAGTGGTTAATGAATACAACTCTCTATTTAAAGAGTTAAAGAATTTAATAAATAATAATAGTAAGATGGAAGAAAAAT ATGTTCAAAGAGTTGAAGATTTTTATGAATTTAATGACAGAAACAACTGTGAAAGAGTATATGATGCTATAACTAACTAA
Upstream 100 bases:
>100_bases TTATATTTCTGGTTTGTTGTATTAGTTTTATTATACTTAGGTTCGAAAGCACATATGAAGTTTAGAAACCAATTTTTGGA TTATTTATAAGGAGTATATA
Downstream 100 bases:
>100_bases ATAAATAAAAGGATGTTGTAAAATGAAGAAAGTAAAAAAAGCGATTATTCCTGCTGCTGGTCTCGGTACACGATTCTTGC CTGCAACAAAAGCAATGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 879; Mature: 879
Protein sequence:
>879_residues MKKFKFSIIMPIYNVEKYLEEAILSVVNQTIGFEDNIQLVLVNDETPDNSVSIIKKYQSLYPENVVFVDKKNGGVSSARN AGIEAATGEYIQCLDPDDMLSENTLEAVYQFFDEKKAEIDLVAIPIKMFEAMSGNHVLNRKFNQTRIIDIYDQYNLILMH AASTYVKREVAKQFKFDETCKIGEDAKYSTSIILESGRYGVVKDAAYMYRVREDGSSAIQTMEENGNWYNHTLERFSLDL LNITIEKLGFIPKYVQNIIMYDLKFKFRVLDCNSTPLTQEEYEEFKENIKKTLQFIDDDIIISTKFSQLHKKRALMMKNE YAGLNPFKVIEGKSNVYLMYKNTFLNKLTKEAVDVEIVNIKDDNLIIEGGFRSFASIENFEIIAKVGNGQFPCKLFRRAN EDSVSFDEITQKKYGFTLEIPKHFVTNNEISFYFKSDKSFVKLLTNTLRFSKLNKKEKTAYAVIEDLLYYIENNKLIFKK YSVKEHTKKEIEKMKFLMKKGKPGYKAVLFRTVHHALNTLKKKDIWLMHDRINKGDDNAQALLEYANQKNDNIKKYFIVR KNTDTYTTLKSNGYNVVGYGSYKHKLLHLLSDKIISSHIDEWVLNPFGSTIVYYQDLFKFKLVFLQHGVTMVDHSNWFNK FSKNIDKLITSSRLEYNSMLTNNYYYTEDEVKLTGMPRFDKLTSDSDKKILFMPTWRKHLVSTTRDSEGNRLYNDHFKDT EYFNKINEVIQDKQLMDLLEEHGYELYFFPHPDIRTQIKDFTPDNRVVIPNFDTSYQDLFKEGSILITDFSSVHFDFSYC KKPVLYYQFDEHHFEKSYFSFENHGFGPVVNEYNSLFKELKNLINNNSKMEEKYVQRVEDFYEFNDRNNCERVYDAITN
Sequences:
>Translated_879_residues MKKFKFSIIMPIYNVEKYLEEAILSVVNQTIGFEDNIQLVLVNDETPDNSVSIIKKYQSLYPENVVFVDKKNGGVSSARN AGIEAATGEYIQCLDPDDMLSENTLEAVYQFFDEKKAEIDLVAIPIKMFEAMSGNHVLNRKFNQTRIIDIYDQYNLILMH AASTYVKREVAKQFKFDETCKIGEDAKYSTSIILESGRYGVVKDAAYMYRVREDGSSAIQTMEENGNWYNHTLERFSLDL LNITIEKLGFIPKYVQNIIMYDLKFKFRVLDCNSTPLTQEEYEEFKENIKKTLQFIDDDIIISTKFSQLHKKRALMMKNE YAGLNPFKVIEGKSNVYLMYKNTFLNKLTKEAVDVEIVNIKDDNLIIEGGFRSFASIENFEIIAKVGNGQFPCKLFRRAN EDSVSFDEITQKKYGFTLEIPKHFVTNNEISFYFKSDKSFVKLLTNTLRFSKLNKKEKTAYAVIEDLLYYIENNKLIFKK YSVKEHTKKEIEKMKFLMKKGKPGYKAVLFRTVHHALNTLKKKDIWLMHDRINKGDDNAQALLEYANQKNDNIKKYFIVR KNTDTYTTLKSNGYNVVGYGSYKHKLLHLLSDKIISSHIDEWVLNPFGSTIVYYQDLFKFKLVFLQHGVTMVDHSNWFNK FSKNIDKLITSSRLEYNSMLTNNYYYTEDEVKLTGMPRFDKLTSDSDKKILFMPTWRKHLVSTTRDSEGNRLYNDHFKDT EYFNKINEVIQDKQLMDLLEEHGYELYFFPHPDIRTQIKDFTPDNRVVIPNFDTSYQDLFKEGSILITDFSSVHFDFSYC KKPVLYYQFDEHHFEKSYFSFENHGFGPVVNEYNSLFKELKNLINNNSKMEEKYVQRVEDFYEFNDRNNCERVYDAITN >Mature_879_residues MKKFKFSIIMPIYNVEKYLEEAILSVVNQTIGFEDNIQLVLVNDETPDNSVSIIKKYQSLYPENVVFVDKKNGGVSSARN AGIEAATGEYIQCLDPDDMLSENTLEAVYQFFDEKKAEIDLVAIPIKMFEAMSGNHVLNRKFNQTRIIDIYDQYNLILMH AASTYVKREVAKQFKFDETCKIGEDAKYSTSIILESGRYGVVKDAAYMYRVREDGSSAIQTMEENGNWYNHTLERFSLDL LNITIEKLGFIPKYVQNIIMYDLKFKFRVLDCNSTPLTQEEYEEFKENIKKTLQFIDDDIIISTKFSQLHKKRALMMKNE YAGLNPFKVIEGKSNVYLMYKNTFLNKLTKEAVDVEIVNIKDDNLIIEGGFRSFASIENFEIIAKVGNGQFPCKLFRRAN EDSVSFDEITQKKYGFTLEIPKHFVTNNEISFYFKSDKSFVKLLTNTLRFSKLNKKEKTAYAVIEDLLYYIENNKLIFKK YSVKEHTKKEIEKMKFLMKKGKPGYKAVLFRTVHHALNTLKKKDIWLMHDRINKGDDNAQALLEYANQKNDNIKKYFIVR KNTDTYTTLKSNGYNVVGYGSYKHKLLHLLSDKIISSHIDEWVLNPFGSTIVYYQDLFKFKLVFLQHGVTMVDHSNWFNK FSKNIDKLITSSRLEYNSMLTNNYYYTEDEVKLTGMPRFDKLTSDSDKKILFMPTWRKHLVSTTRDSEGNRLYNDHFKDT EYFNKINEVIQDKQLMDLLEEHGYELYFFPHPDIRTQIKDFTPDNRVVIPNFDTSYQDLFKEGSILITDFSSVHFDFSYC KKPVLYYQFDEHHFEKSYFSFENHGFGPVVNEYNSLFKELKNLINNNSKMEEKYVQRVEDFYEFNDRNNCERVYDAITN
Specific function: Involved in the biosynthesis of galactosamine-containing minor teichoic acid, a non-essential cell wall polymer in B.subtilis 168 [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=94, Percent_Identity=39.3617021276596, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI212640903, Length=303, Percent_Identity=23.1023102310231, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007554 - InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2; PF04464 Glyphos_transf [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 103423; Mature: 103423
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFKFSIIMPIYNVEKYLEEAILSVVNQTIGFEDNIQLVLVNDETPDNSVSIIKKYQSL CCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHH YPENVVFVDKKNGGVSSARNAGIEAATGEYIQCLDPDDMLSENTLEAVYQFFDEKKAEID CCCCEEEEECCCCCCCHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEE LVAIPIKMFEAMSGNHVLNRKFNQTRIIDIYDQYNLILMHAASTYVKREVAKQFKFDETC EEEECHHHHHHCCCCEEECCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCCCC KIGEDAKYSTSIILESGRYGVVKDAAYMYRVREDGSSAIQTMEENGNWYNHTLERFSLDL CCCCCCCCEEEEEEECCCCCEEECHHHHEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHH LNITIEKLGFIPKYVQNIIMYDLKFKFRVLDCNSTPLTQEEYEEFKENIKKTLQFIDDDI HHHHHHHHCCCHHHHHHHHEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCE IISTKFSQLHKKRALMMKNEYAGLNPFKVIEGKSNVYLMYKNTFLNKLTKEAVDVEIVNI EEECHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECHHHHHHHHHHHHCEEEEEE KDDNLIIEGGFRSFASIENFEIIAKVGNGQFPCKLFRRANEDSVSFDEITQKKYGFTLEI CCCCEEEECCCHHHHCCCCEEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHCCEEEEC PKHFVTNNEISFYFKSDKSFVKLLTNTLRFSKLNKKEKTAYAVIEDLLYYIENNKLIFKK CHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEE YSVKEHTKKEIEKMKFLMKKGKPGYKAVLFRTVHHALNTLKKKDIWLMHDRINKGDDNAQ CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHH ALLEYANQKNDNIKKYFIVRKNTDTYTTLKSNGYNVVGYGSYKHKLLHLLSDKIISSHID HHHHHHHCCCCCCEEEEEEEECCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHH EWVLNPFGSTIVYYQDLFKFKLVFLQHGVTMVDHSNWFNKFSKNIDKLITSSRLEYNSML HHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHEE TNNYYYTEDEVKLTGMPRFDKLTSDSDKKILFMPTWRKHLVSTTRDSEGNRLYNDHFKDT ECCEEEECCCEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCH EYFNKINEVIQDKQLMDLLEEHGYELYFFPHPDIRTQIKDFTPDNRVVIPNFDTSYQDLF HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCEEECCCCCHHHHHH KEGSILITDFSSVHFDFSYCKKPVLYYQFDEHHFEKSYFSFENHGFGPVVNEYNSLFKEL HCCCEEEEECCCCEEEHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH KNLINNNSKMEEKYVQRVEDFYEFNDRNNCERVYDAITN HHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure MKKFKFSIIMPIYNVEKYLEEAILSVVNQTIGFEDNIQLVLVNDETPDNSVSIIKKYQSL CCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHH YPENVVFVDKKNGGVSSARNAGIEAATGEYIQCLDPDDMLSENTLEAVYQFFDEKKAEID CCCCEEEEECCCCCCCHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEE LVAIPIKMFEAMSGNHVLNRKFNQTRIIDIYDQYNLILMHAASTYVKREVAKQFKFDETC EEEECHHHHHHCCCCEEECCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCCCC KIGEDAKYSTSIILESGRYGVVKDAAYMYRVREDGSSAIQTMEENGNWYNHTLERFSLDL CCCCCCCCEEEEEEECCCCCEEECHHHHEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHH LNITIEKLGFIPKYVQNIIMYDLKFKFRVLDCNSTPLTQEEYEEFKENIKKTLQFIDDDI HHHHHHHHCCCHHHHHHHHEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCE IISTKFSQLHKKRALMMKNEYAGLNPFKVIEGKSNVYLMYKNTFLNKLTKEAVDVEIVNI EEECHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECHHHHHHHHHHHHCEEEEEE KDDNLIIEGGFRSFASIENFEIIAKVGNGQFPCKLFRRANEDSVSFDEITQKKYGFTLEI CCCCEEEECCCHHHHCCCCEEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHCCEEEEC PKHFVTNNEISFYFKSDKSFVKLLTNTLRFSKLNKKEKTAYAVIEDLLYYIENNKLIFKK CHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEE YSVKEHTKKEIEKMKFLMKKGKPGYKAVLFRTVHHALNTLKKKDIWLMHDRINKGDDNAQ CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHH ALLEYANQKNDNIKKYFIVRKNTDTYTTLKSNGYNVVGYGSYKHKLLHLLSDKIISSHID HHHHHHHCCCCCCEEEEEEEECCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHH EWVLNPFGSTIVYYQDLFKFKLVFLQHGVTMVDHSNWFNKFSKNIDKLITSSRLEYNSML HHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHEE TNNYYYTEDEVKLTGMPRFDKLTSDSDKKILFMPTWRKHLVSTTRDSEGNRLYNDHFKDT ECCEEEECCCEEEECCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCH EYFNKINEVIQDKQLMDLLEEHGYELYFFPHPDIRTQIKDFTPDNRVVIPNFDTSYQDLF HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCEEECCCCCHHHHHH KEGSILITDFSSVHFDFSYCKKPVLYYQFDEHHFEKSYFSFENHGFGPVVNEYNSLFKEL HCCCEEEEECCCCEEEHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH KNLINNNSKMEEKYVQRVEDFYEFNDRNNCERVYDAITN HHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]