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The map label for this gene is cpdB [H]

Identifier: 222150887

GI number: 222150887

Start: 683521

End: 684384

Strand: Direct

Name: cpdB [H]

Synonym: MCCL_0637

Alternate gene names: 222150887

Gene position: 683521-684384 (Clockwise)

Preceding gene: 222150885

Following gene: 222150890

Centisome position: 32.51

GC content: 38.66

Gene sequence:

>864_bases
ATGAAGAAAGGTATTATTAATATACATATTATCATAACAAGCGATATATGCGGGAGAATGTTCAGTGAAAGCAATCATCC
CGGGCTGATAAAAGCAGCGACGTTTGTAAGAATGCATCGTACAGGCGATGATCTGCTGCTATTGAATAATGGACAGACAT
TAACGGGGTCCTATGCTGCGGAATACTTTGCAGCGCATCGATCATTCAGAAGAAATCCACAGATTACGATAATGAATGCG
ATGCACTATGATGCCAGCAATATTAGTATCCATGACTTTAAGCTCGGCAGAATGTACTTCAACCGCTCACAGAGTCTAAG
CGATTTTCCTTTTATTTCGGTGAATATTATCAATTCACGAACGAAGGAACCTTACTATAACAAACCTTATATTATCAAGA
CGATTAAAGGTATTAAGATTGCAGTCCTTGCGATGAGTGAGATAGGAGATGTTACGGATATTATTGAAGATATCGAAGTG
GAGCATCCAGTCAATGCTATACGCACATGGATACGTTATCTTTACGACGAGGAGAATCCGGATTTCGTCATTGGCCTGCA
CAATGGAGATATTCAGACGATTGAAAGAGATGGTCATCTGCGTACAGAAGGACTGGATCTAATTATTACCAATAGCAATG
AAAAGCTACAGGACACAGATAGAGAGATCATCTATACTTCAGGTCAAGAACACTTAACACAAGTTGATCTGGAATTTAAG
GAACGCACGAATTCCTTTGAATATATTAACAAGCATGTCGCTCCTGTAAGTATCGATCTATACCCAATTGATCCGAGCCT
GATGGAGAAAGTCTATTATGATGAGAAAGAATATAGACAATATAGTGAACAAGTACAACATTAA

Upstream 100 bases:

>100_bases
ATATTCATCAGGATAAATAGTATAATATGATAAAGTACGTACTTTTTTATATTTTTCATAGGCGCTCCACAGTAATTATT
TAATAAGGGCAGGGGATTTC

Downstream 100 bases:

>100_bases
AAAGTCTGACCTTAAGAAATTAAACGTTTTCTTAAGGTCAGACTTTTTCATTATGATTATTGCCCATAGATGATGAGCGT
GATAATTGCTGTTACAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKKGIINIHIIITSDICGRMFSESNHPGLIKAATFVRMHRTGDDLLLLNNGQTLTGSYAAEYFAAHRSFRRNPQITIMNA
MHYDASNISIHDFKLGRMYFNRSQSLSDFPFISVNIINSRTKEPYYNKPYIIKTIKGIKIAVLAMSEIGDVTDIIEDIEV
EHPVNAIRTWIRYLYDEENPDFVIGLHNGDIQTIERDGHLRTEGLDLIITNSNEKLQDTDREIIYTSGQEHLTQVDLEFK
ERTNSFEYINKHVAPVSIDLYPIDPSLMEKVYYDEKEYRQYSEQVQH

Sequences:

>Translated_287_residues
MKKGIINIHIIITSDICGRMFSESNHPGLIKAATFVRMHRTGDDLLLLNNGQTLTGSYAAEYFAAHRSFRRNPQITIMNA
MHYDASNISIHDFKLGRMYFNRSQSLSDFPFISVNIINSRTKEPYYNKPYIIKTIKGIKIAVLAMSEIGDVTDIIEDIEV
EHPVNAIRTWIRYLYDEENPDFVIGLHNGDIQTIERDGHLRTEGLDLIITNSNEKLQDTDREIIYTSGQEHLTQVDLEFK
ERTNSFEYINKHVAPVSIDLYPIDPSLMEKVYYDEKEYRQYSEQVQH
>Mature_287_residues
MKKGIINIHIIITSDICGRMFSESNHPGLIKAATFVRMHRTGDDLLLLNNGQTLTGSYAAEYFAAHRSFRRNPQITIMNA
MHYDASNISIHDFKLGRMYFNRSQSLSDFPFISVNIINSRTKEPYYNKPYIIKTIKGIKIAVLAMSEIGDVTDIIEDIEV
EHPVNAIRTWIRYLYDEENPDFVIGLHNGDIQTIERDGHLRTEGLDLIITNSNEKLQDTDREIIYTSGQEHLTQVDLEFK
ERTNSFEYINKHVAPVSIDLYPIDPSLMEKVYYDEKEYRQYSEQVQH

Specific function: This bifunctional enzyme catalyzes two consecutive reactions during ribonucleic acid degradation. Converts a 2',3'- cyclic nucleotide to a 3'-nucleotide and then the 3'-nucleotide to the corresponding nucleoside and phosphate [H]

COG id: COG0737

COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5'-nucleotidase family [H]

Homologues:

None

Paralogues:

None

Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008334
- InterPro:   IPR006146
- InterPro:   IPR006179
- InterPro:   IPR006294
- InterPro:   IPR004843 [H]

Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]

EC number: =3.1.3.6; =3.1.4.16 [H]

Molecular weight: Translated: 33284; Mature: 33284

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGIINIHIIITSDICGRMFSESNHPGLIKAATFVRMHRTGDDLLLLNNGQTLTGSYAA
CCCCEEEEEEEEECCHHHHHHCCCCCCCEEEHEEEEEEECCCCCEEEEECCCEEECHHHH
EYFAAHRSFRRNPQITIMNAMHYDASNISIHDFKLGRMYFNRSQSLSDFPFISVNIINSR
HHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHHHCCCCCCCCCCCEEEEEEECCC
TKEPYYNKPYIIKTIKGIKIAVLAMSEIGDVTDIIEDIEVEHPVNAIRTWIRYLYDEENP
CCCCCCCCCEEEEEECCEEEEEEEEHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
DFVIGLHNGDIQTIERDGHLRTEGLDLIITNSNEKLQDTDREIIYTSGQEHLTQVDLEFK
CEEEEEECCCEEEEECCCCEEECCEEEEEECCCCCCCCCCCEEEEECCHHHHEEECCHHH
ERTNSFEYINKHVAPVSIDLYPIDPSLMEKVYYDEKEYRQYSEQVQH
HCCCHHHHHHHCCCEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKKGIINIHIIITSDICGRMFSESNHPGLIKAATFVRMHRTGDDLLLLNNGQTLTGSYAA
CCCCEEEEEEEEECCHHHHHHCCCCCCCEEEHEEEEEEECCCCCEEEEECCCEEECHHHH
EYFAAHRSFRRNPQITIMNAMHYDASNISIHDFKLGRMYFNRSQSLSDFPFISVNIINSR
HHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEEHHHCCCCCCCCCCCEEEEEEECCC
TKEPYYNKPYIIKTIKGIKIAVLAMSEIGDVTDIIEDIEVEHPVNAIRTWIRYLYDEENP
CCCCCCCCCEEEEEECCEEEEEEEEHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
DFVIGLHNGDIQTIERDGHLRTEGLDLIITNSNEKLQDTDREIIYTSGQEHLTQVDLEFK
CEEEEEECCCEEEEECCCCEEECCEEEEEECCCCCCCCCCCEEEEECCHHHHEEECCHHH
ERTNSFEYINKHVAPVSIDLYPIDPSLMEKVYYDEKEYRQYSEQVQH
HCCCHHHHHHHCCCEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]