| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yjbG [H]
Identifier: 222150865
GI number: 222150865
Start: 659883
End: 660566
Strand: Direct
Name: yjbG [H]
Synonym: MCCL_0615
Alternate gene names: 222150865
Gene position: 659883-660566 (Clockwise)
Preceding gene: 222150864
Following gene: 222150869
Centisome position: 31.39
GC content: 38.16
Gene sequence:
>684_bases ATGAACTGGACAGATAGTGTGAACAATACATTTACCTTGACGCATGAATTTGGACATAGTGCACATAGTTATTTCTCAAG AAATAATCAGCCATCTAATATGTCAGGCTATTCTATCTTCGTAGCGGAAGTTGCTTCAACTTGTAACGAAGCATTGCTTG CTGATTATATGTACAAGCATCTGGACGATGATAAGAAGAAGCTCTACTTACTGAACTACCAGTTAGATGGATTCCGCGGT ACAGTGTTCAGACAGACAATGTTTGCAGAGTTTGAATATTTAATCCATACACTTGCTGAACAGAATGAACCGTTGACAGC AGAGCGACTAAACGCAGAGTACCGCAAGTTAAACGAGAAGTATTACGGTGACGCTGTAATTACGGATGACTATATTCAGT ATGAGTGGAGCAGAATTCCACATTTCTATTACAATTACTATGTATATCAATATGCAACAGGATATAGTGCGGCATACGCT TTAAGTAAGAAGATTTTAGAAGAGGGACAACCAGCTGTTGATAAGTATATCAATGAATTCCTGAAAGCCGGAAGTTCTGA TTATCCGATCGAAGTGCTGAAGAAAGCAGGTGTCGATATGAACGAAAAAACACCAATTGAAAATGCATGTAAAGTATTTG AAGAACGTCTGGATGCTTTTGAAGCATTGATTAAAAGGTCGTAA
Upstream 100 bases:
>100_bases GATTAACGAATCGCTGGGTCGATGCTGTTATCGAGAATAAGGGTCCAAGAGAAGCGGAGCATACTCTTCAGGTACGTTCG GTACTAATCCATTCATCTTA
Downstream 100 bases:
>100_bases ACACTCGCGAACAGACACGCATAAAATCACGAAAAGACGCAAAAGCAATGATTTTTGTTGCTCGTGTCTTTTTGATTTTA TCGAAGTGTCTGCGAGTGGA
Product: ThiMet oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MNWTDSVNNTFTLTHEFGHSAHSYFSRNNQPSNMSGYSIFVAEVASTCNEALLADYMYKHLDDDKKKLYLLNYQLDGFRG TVFRQTMFAEFEYLIHTLAEQNEPLTAERLNAEYRKLNEKYYGDAVITDDYIQYEWSRIPHFYYNYYVYQYATGYSAAYA LSKKILEEGQPAVDKYINEFLKAGSSDYPIEVLKKAGVDMNEKTPIENACKVFEERLDAFEALIKRS
Sequences:
>Translated_227_residues MNWTDSVNNTFTLTHEFGHSAHSYFSRNNQPSNMSGYSIFVAEVASTCNEALLADYMYKHLDDDKKKLYLLNYQLDGFRG TVFRQTMFAEFEYLIHTLAEQNEPLTAERLNAEYRKLNEKYYGDAVITDDYIQYEWSRIPHFYYNYYVYQYATGYSAAYA LSKKILEEGQPAVDKYINEFLKAGSSDYPIEVLKKAGVDMNEKTPIENACKVFEERLDAFEALIKRS >Mature_227_residues MNWTDSVNNTFTLTHEFGHSAHSYFSRNNQPSNMSGYSIFVAEVASTCNEALLADYMYKHLDDDKKKLYLLNYQLDGFRG TVFRQTMFAEFEYLIHTLAEQNEPLTAERLNAEYRKLNEKYYGDAVITDDYIQYEWSRIPHFYYNYYVYQYATGYSAAYA LSKKILEEGQPAVDKYINEFLKAGSSDYPIEVLKKAGVDMNEKTPIENACKVFEERLDAFEALIKRS
Specific function: Unknown
COG id: COG1164
COG function: function code E; Oligoendopeptidase F
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 - InterPro: IPR004438 - InterPro: IPR013647 [H]
Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]
EC number: NA
Molecular weight: Translated: 26514; Mature: 26514
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWTDSVNNTFTLTHEFGHSAHSYFSRNNQPSNMSGYSIFVAEVASTCNEALLADYMYKH CCCCCCCCCEEEEEHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LDDDKKKLYLLNYQLDGFRGTVFRQTMFAEFEYLIHTLAEQNEPLTAERLNAEYRKLNEK CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH YYGDAVITDDYIQYEWSRIPHFYYNYYVYQYATGYSAAYALSKKILEEGQPAVDKYINEF HCCCEEEECHHHHHHHHHCCHHHHHEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHH LKAGSSDYPIEVLKKAGVDMNEKTPIENACKVFEERLDAFEALIKRS HHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNWTDSVNNTFTLTHEFGHSAHSYFSRNNQPSNMSGYSIFVAEVASTCNEALLADYMYKH CCCCCCCCCEEEEEHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LDDDKKKLYLLNYQLDGFRGTVFRQTMFAEFEYLIHTLAEQNEPLTAERLNAEYRKLNEK CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH YYGDAVITDDYIQYEWSRIPHFYYNYYVYQYATGYSAAYALSKKILEEGQPAVDKYINEF HCCCEEEECHHHHHHHHHCCHHHHHEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHH LKAGSSDYPIEVLKKAGVDMNEKTPIENACKVFEERLDAFEALIKRS HHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]