| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150764
Identifier: 222150764
GI number: 222150764
Start: 545982
End: 547097
Strand: Direct
Name: 222150764
Synonym: MCCL_0514
Alternate gene names: NA
Gene position: 545982-547097 (Clockwise)
Preceding gene: 222150763
Following gene: 222150765
Centisome position: 25.97
GC content: 36.47
Gene sequence:
>1116_bases ATGTATTACTGTCTGCTCACAGATGACCATGTATATCTTGATGAGCTGACAAAAATGTTTGAAGTCGTTTATAATGACGT CACTAAAGTAGAGATAGAAAGTGAAAACTTTGTCGTCCATTATATCTTTCAATACTTTTTTGAGCATATGAATTATAATC TTGCTTTAGAATGGATTGATTTTCAGCCTTATAATATTCAGATGCGTACTGAAGTGCGCAATTTGAAGGCCATGACGTTA CTATTTAATAGCAAGTATCATGAAGCGGCAAAGATATTAAAGCAATTACTTGAAGAAAATCCTGCTGATATCAATGCGCT CTGTCACTACACCTTACTGCTATACAATACACATCAGACGACAACGTATCAATCCTACTTGAAGAAACTTAGAACGATTA TCCCGATTAATGATGATGAAAAATTTAAATTGGGTATCGTACTGAGCTTCCTGAAGGAATATACAGAATCCTATCAACTG CTATTTCCGCTGTATCAAAAAGGAAAGTTTTACAATTCACAGATGCTGCATGCGTTAAGTTATTCAAGCTATGCGCTTGG CTATGTATCGCAGTCTGATATGTTCTTTCAGCAGCTTGGGGAGATTGTAAGCCATCCTGGTGTAAGTCCACGTAAGATGG CTGAAGGTGAAGCGTATATTAAGGATAACGTTATGCCGCTTTTAAATAGTGAGGATCAGCACCGTCGTATTATTGGTATC TTTCTGTTATCGCGCCTCAAGGATAAGACGTTGGTGATCAATCAGGATGTATGGAATCAGCTTGAGGAGATGAGTGATTA TGAGAAGTTATACCTCTCTTATATCTTTCATAATATTCACCTCGTTAAACTAGATTTCATTCATAGAGGACTTGAATTAA TCTATGATCAGGATGGTAGGCTGGAGTTGATGGAGCGATGGATTGATATGGCAGAGGCCGTCATAGACAAAAGATTAAAT CTTAAGCAGATTAATGCATATACAGCGGTTTGCTACTTCCTGTTTGAAAGAGCACGAAATGAAAAATTATCAAAACGTGC AGTGATAGAAAAATTTAACACGACTCGCTATCATTTTATGAAGGTGTATGAACAGTTCAAGCAAAATAATATTTAA
Upstream 100 bases:
>100_bases GATTATTTTTAAAGATGATTTTAATGAAGAAGATGTATTCTATGATCTGAGCCAGCTCTTTATTAGACAACGTGACCCTA ATAAAGCTTTTTTATTCGGT
Downstream 100 bases:
>100_bases AAATCTGGAATTCATGTATATTATAAGTACTGAACAAACATGGAGGTATAATTATGAGTGAAATTAAAGAATATGACGTG ATCATTGTTGGTGCTGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Domain Protein; YvcD Protein
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MYYCLLTDDHVYLDELTKMFEVVYNDVTKVEIESENFVVHYIFQYFFEHMNYNLALEWIDFQPYNIQMRTEVRNLKAMTL LFNSKYHEAAKILKQLLEENPADINALCHYTLLLYNTHQTTTYQSYLKKLRTIIPINDDEKFKLGIVLSFLKEYTESYQL LFPLYQKGKFYNSQMLHALSYSSYALGYVSQSDMFFQQLGEIVSHPGVSPRKMAEGEAYIKDNVMPLLNSEDQHRRIIGI FLLSRLKDKTLVINQDVWNQLEEMSDYEKLYLSYIFHNIHLVKLDFIHRGLELIYDQDGRLELMERWIDMAEAVIDKRLN LKQINAYTAVCYFLFERARNEKLSKRAVIEKFNTTRYHFMKVYEQFKQNNI
Sequences:
>Translated_371_residues MYYCLLTDDHVYLDELTKMFEVVYNDVTKVEIESENFVVHYIFQYFFEHMNYNLALEWIDFQPYNIQMRTEVRNLKAMTL LFNSKYHEAAKILKQLLEENPADINALCHYTLLLYNTHQTTTYQSYLKKLRTIIPINDDEKFKLGIVLSFLKEYTESYQL LFPLYQKGKFYNSQMLHALSYSSYALGYVSQSDMFFQQLGEIVSHPGVSPRKMAEGEAYIKDNVMPLLNSEDQHRRIIGI FLLSRLKDKTLVINQDVWNQLEEMSDYEKLYLSYIFHNIHLVKLDFIHRGLELIYDQDGRLELMERWIDMAEAVIDKRLN LKQINAYTAVCYFLFERARNEKLSKRAVIEKFNTTRYHFMKVYEQFKQNNI >Mature_371_residues MYYCLLTDDHVYLDELTKMFEVVYNDVTKVEIESENFVVHYIFQYFFEHMNYNLALEWIDFQPYNIQMRTEVRNLKAMTL LFNSKYHEAAKILKQLLEENPADINALCHYTLLLYNTHQTTTYQSYLKKLRTIIPINDDEKFKLGIVLSFLKEYTESYQL LFPLYQKGKFYNSQMLHALSYSSYALGYVSQSDMFFQQLGEIVSHPGVSPRKMAEGEAYIKDNVMPLLNSEDQHRRIIGI FLLSRLKDKTLVINQDVWNQLEEMSDYEKLYLSYIFHNIHLVKLDFIHRGLELIYDQDGRLELMERWIDMAEAVIDKRLN LKQINAYTAVCYFLFERARNEKLSKRAVIEKFNTTRYHFMKVYEQFKQNNI
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44509; Mature: 44509
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYCLLTDDHVYLDELTKMFEVVYNDVTKVEIESENFVVHYIFQYFFEHMNYNLALEWID CEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEE FQPYNIQMRTEVRNLKAMTLLFNSKYHEAAKILKQLLEENPADINALCHYTLLLYNTHQT CCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCC TTYQSYLKKLRTIIPINDDEKFKLGIVLSFLKEYTESYQLLFPLYQKGKFYNSQMLHALS HHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH YSSYALGYVSQSDMFFQQLGEIVSHPGVSPRKMAEGEAYIKDNVMPLLNSEDQHRRIIGI HCCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHCCCCCCCCCCCHHHHHHHH FLLSRLKDKTLVINQDVWNQLEEMSDYEKLYLSYIFHNIHLVKLDFIHRGLELIYDQDGR HHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHCHHHEECCCCC LELMERWIDMAEAVIDKRLNLKQINAYTAVCYFLFERARNEKLSKRAVIEKFNTTRYHFM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH KVYEQFKQNNI HHHHHHHHCCC >Mature Secondary Structure MYYCLLTDDHVYLDELTKMFEVVYNDVTKVEIESENFVVHYIFQYFFEHMNYNLALEWID CEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEE FQPYNIQMRTEVRNLKAMTLLFNSKYHEAAKILKQLLEENPADINALCHYTLLLYNTHQT CCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCC TTYQSYLKKLRTIIPINDDEKFKLGIVLSFLKEYTESYQLLFPLYQKGKFYNSQMLHALS HHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH YSSYALGYVSQSDMFFQQLGEIVSHPGVSPRKMAEGEAYIKDNVMPLLNSEDQHRRIIGI HCCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHCCCCCCCCCCCHHHHHHHH FLLSRLKDKTLVINQDVWNQLEEMSDYEKLYLSYIFHNIHLVKLDFIHRGLELIYDQDGR HHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHCHHHEECCCCC LELMERWIDMAEAVIDKRLNLKQINAYTAVCYFLFERARNEKLSKRAVIEKFNTTRYHFM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH KVYEQFKQNNI HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA