| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yfbR [C]
Identifier: 222150758
GI number: 222150758
Start: 537406
End: 538053
Strand: Direct
Name: yfbR [C]
Synonym: MCCL_0508
Alternate gene names: 222150758
Gene position: 537406-538053 (Clockwise)
Preceding gene: 222150757
Following gene: 222150759
Centisome position: 25.56
GC content: 36.27
Gene sequence:
>648_bases ATGGGTGTCCATCAATATTTCAAAAGTTTGTCGGATCTGGAGAAGTTAATAAGATGTCCCGGCAAATTCAAATATCAGGA GCACAATGTTGCCGCCCATTCATTTAAGGTGACAAAGATTGCGCAATACTTAGCAACTGTGGAGGAGTATCATGGTACAG AGATTAACTGGAAATACGTGTATGAGAAAGCATTAAACCATGATTATCCTGAAATCTTCACGGGAGACATCAAGACGCCT GTGAAATATGCGTCAAAAGAAATAAAACGTTTATTTAGTGAAGTTGAAGAAGAAATGATCAGTAAGTTTATTGACAGTGA GTTTCCGGAAGCATATAAAGAAACATACCGTGAACGATTAAAAGAAGGTAAAGACGATACGATCGAAGGTCAGATTCTGT CAGTAGCTGATAAGATTGATCTATTGTATGAATCCTTTGGTGAGATTCAAAAACGTAATCCAGAACCATTATTCTTTGAA ATTTATGACAAAAGTTTAAGAACCATCATACAGTTCAAGCATCTTTATTGTGTGCAGGATTTTCTTGATAATATCCTTCC AGATATGCTGCAGGAAAAATTTATCCCAAGATCTGAACTGCGTGAAATAACGATGGCTATCTTACAGCAGAAGGATAACT TACAATGA
Upstream 100 bases:
>100_bases TTCGTCGATAAACAAGGTAAAGTATTGAAGACGTATGTAGGTGAACTTAATCAACAAAAAATAGAAGAAATTATCAGGCA GATTCAATAGGAGGGATTCA
Downstream 100 bases:
>100_bases CAATATGGTATGTATTAGCATGTACGTTGCCTGCATTTCTGGTGATCTGCTTCAGTATGATTGTACGTAATAAATATACA GGATTACTGTTGTCGGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MGVHQYFKSLSDLEKLIRCPGKFKYQEHNVAAHSFKVTKIAQYLATVEEYHGTEINWKYVYEKALNHDYPEIFTGDIKTP VKYASKEIKRLFSEVEEEMISKFIDSEFPEAYKETYRERLKEGKDDTIEGQILSVADKIDLLYESFGEIQKRNPEPLFFE IYDKSLRTIIQFKHLYCVQDFLDNILPDMLQEKFIPRSELREITMAILQQKDNLQ
Sequences:
>Translated_215_residues MGVHQYFKSLSDLEKLIRCPGKFKYQEHNVAAHSFKVTKIAQYLATVEEYHGTEINWKYVYEKALNHDYPEIFTGDIKTP VKYASKEIKRLFSEVEEEMISKFIDSEFPEAYKETYRERLKEGKDDTIEGQILSVADKIDLLYESFGEIQKRNPEPLFFE IYDKSLRTIIQFKHLYCVQDFLDNILPDMLQEKFIPRSELREITMAILQQKDNLQ >Mature_214_residues GVHQYFKSLSDLEKLIRCPGKFKYQEHNVAAHSFKVTKIAQYLATVEEYHGTEINWKYVYEKALNHDYPEIFTGDIKTPV KYASKEIKRLFSEVEEEMISKFIDSEFPEAYKETYRERLKEGKDDTIEGQILSVADKIDLLYESFGEIQKRNPEPLFFEI YDKSLRTIIQFKHLYCVQDFLDNILPDMLQEKFIPRSELREITMAILQQKDNLQ
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0207 family [H]
Homologues:
Organism=Escherichia coli, GI1788628, Length=159, Percent_Identity=27.0440251572327, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022971 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25556; Mature: 25425
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVHQYFKSLSDLEKLIRCPGKFKYQEHNVAAHSFKVTKIAQYLATVEEYHGTEINWKYV CCHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH YEKALNHDYPEIFTGDIKTPVKYASKEIKRLFSEVEEEMISKFIDSEFPEAYKETYRERL HHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KEGKDDTIEGQILSVADKIDLLYESFGEIQKRNPEPLFFEIYDKSLRTIIQFKHLYCVQD HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FLDNILPDMLQEKFIPRSELREITMAILQQKDNLQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GVHQYFKSLSDLEKLIRCPGKFKYQEHNVAAHSFKVTKIAQYLATVEEYHGTEINWKYV CHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH YEKALNHDYPEIFTGDIKTPVKYASKEIKRLFSEVEEEMISKFIDSEFPEAYKETYRERL HHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KEGKDDTIEGQILSVADKIDLLYESFGEIQKRNPEPLFFEIYDKSLRTIIQFKHLYCVQD HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FLDNILPDMLQEKFIPRSELREITMAILQQKDNLQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA