| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150726
Identifier: 222150726
GI number: 222150726
Start: 505063
End: 505596
Strand: Direct
Name: 222150726
Synonym: MCCL_0476
Alternate gene names: NA
Gene position: 505063-505596 (Clockwise)
Preceding gene: 222150725
Following gene: 222150732
Centisome position: 24.02
GC content: 37.64
Gene sequence:
>534_bases ATGATGAGACAGTCAATTGCAATTGATATGGATGAAGTACTTGCAGATACATTGAAGAAAGTTATCTTTCAGTTCAATGA AAGTGCAGGTATGTCATTAACGAAAGAAGATTTGTACGAAAGGAAACTTCGCACTGAGTACCCGGAACACGTGGATAAGT TAGACAAGCTGTTACTAGATCGAGGTTTCTTTAGAGATTTAGAAGTATTTCCTGATGCAATACGCGTGGTAGAGCAACTC ACCCATCATTATGATGTTTATATTGCTACAGCTGCGATGGATGTGCCGACATCATTCGATGCAAAATATGAATGGCTGAG AGAACATTTTCCGTTTTTAGATCCACAGCATTTTATCTTCTGCGGTAATAAAGGCATTGTTGGAACAGATTATCTGATAG ATGATAATCCGAGACAGCTGCGTGCATTTAAAGGTAAAGGTATTATCTTCGATGCTGTACATAACCAAAGTATTTCTGAA TTTGACCGAGTAAGCTCATGGAATGATGTTGAACGTTATTTCTTGGATAAATAG
Upstream 100 bases:
>100_bases AAGTTCATAAAGTAATCAATTCATTCTTCAGTTAATCAAATAACTACAATTAGCAATCTAGATTGCTTATAATGATAGTA ATATAGGATAAAGGATGATT
Downstream 100 bases:
>100_bases ATACTAAGATTTATATATATCACAACAAAACCTAGACCATATAGATTATGGTCTAGGTTTTGTTGTAACAATGATTGTGT CTATTAAAATAATGTATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MMRQSIAIDMDEVLADTLKKVIFQFNESAGMSLTKEDLYERKLRTEYPEHVDKLDKLLLDRGFFRDLEVFPDAIRVVEQL THHYDVYIATAAMDVPTSFDAKYEWLREHFPFLDPQHFIFCGNKGIVGTDYLIDDNPRQLRAFKGKGIIFDAVHNQSISE FDRVSSWNDVERYFLDK
Sequences:
>Translated_177_residues MMRQSIAIDMDEVLADTLKKVIFQFNESAGMSLTKEDLYERKLRTEYPEHVDKLDKLLLDRGFFRDLEVFPDAIRVVEQL THHYDVYIATAAMDVPTSFDAKYEWLREHFPFLDPQHFIFCGNKGIVGTDYLIDDNPRQLRAFKGKGIIFDAVHNQSISE FDRVSSWNDVERYFLDK >Mature_177_residues MMRQSIAIDMDEVLADTLKKVIFQFNESAGMSLTKEDLYERKLRTEYPEHVDKLDKLLLDRGFFRDLEVFPDAIRVVEQL THHYDVYIATAAMDVPTSFDAKYEWLREHFPFLDPQHFIFCGNKGIVGTDYLIDDNPRQLRAFKGKGIIFDAVHNQSISE FDRVSSWNDVERYFLDK
Specific function: Dephosphorylates the 5' and 2'(3')-phosphates of deoxyribonucleotides (Potential) [H]
COG id: COG4502
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'(3')-deoxyribonucleotidase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010708 - InterPro: IPR023214 [H]
Pfam domain/function: PF06941 NT5C [H]
EC number: NA
Molecular weight: Translated: 20836; Mature: 20836
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRQSIAIDMDEVLADTLKKVIFQFNESAGMSLTKEDLYERKLRTEYPEHVDKLDKLLLD CCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH RGFFRDLEVFPDAIRVVEQLTHHYDVYIATAAMDVPTSFDAKYEWLREHFPFLDPQHFIF CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEE CGNKGIVGTDYLIDDNPRQLRAFKGKGIIFDAVHNQSISEFDRVSSWNDVERYFLDK ECCCCCCCCCCEECCCHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MMRQSIAIDMDEVLADTLKKVIFQFNESAGMSLTKEDLYERKLRTEYPEHVDKLDKLLLD CCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH RGFFRDLEVFPDAIRVVEQLTHHYDVYIATAAMDVPTSFDAKYEWLREHFPFLDPQHFIF CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEE CGNKGIVGTDYLIDDNPRQLRAFKGKGIIFDAVHNQSISEFDRVSSWNDVERYFLDK ECCCCCCCCCCEECCCHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA