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The map label for this gene is yfmR [H]

Identifier: 222150721

GI number: 222150721

Start: 497717

End: 499591

Strand: Direct

Name: yfmR [H]

Synonym: MCCL_0471

Alternate gene names: 222150721

Gene position: 497717-499591 (Clockwise)

Preceding gene: 222150719

Following gene: 222150722

Centisome position: 23.67

GC content: 38.77

Gene sequence:

>1875_bases
ATGGAAGCATATAAAATAGAAAATTTGACAAAGCAGTACGGGGTAAAAACGGTATTTGAAAACCTTAGCTTAAGTATTTC
AACCGGCGATAAGATTGCACTTGTCGGTATCAATGGAACAGGCAAAAGTGCACTGTTAAAATGTATTGCTGAGATAGAGG
AACATAATGGAACAGTGACGCATCCTAATGGGTTTACAATCGAATATGCAGCGCAATCGCCTGTACTAGATGAATCACTT
TCAATTACCGATAATGTGCTGGACCGTGCGCATCCAGTGATGCAGTTGTTTAAGAAATATAATCACATATTAAAACAGAT
GGAATCAGATTATAATGACACATTAGCACATGAACTTAGTGAAGTTCAGACGCAGATTGAACAGATGGATGGATTTACAT
ATCGCAGCTCTGCAGAAGCAATTCTTACGAAACTCGGAATATTGAATCTTGAGGCACCGGTTACTACACTTAGCGGTGGC
CAGAAGAAACGTGTTGCACTTGCAAAATCTTTACTTAAGGCACCAGACTTACTGTTACTTGACGAACCGACCAACCACCT
TGATTTTGAATCTATATACTGGCTCATTCAGTTCATAAAAAACTATAACAAAGCTGTTCTTGTTGTGACACATGACCGTT
ACTTCCTGAATGAGATTACGAACCGTATTGTTGAATTAAGAAATGGTAAGCTCTATCAGTATCGTGGCAACTACGAAGAT
TACATCGTTCAAAAAGCTGAAGATGAACTTATCCTTGCCAATCAGGAACAGAAGGAAAGGCAATTGTATAAACAAGAACT
CGCCTGGATGCGTAAAGGTGCGAAAGCAAGAACAACGAAACAACAGGCGAGAATTGACCGTTTCAGTGATATAGAGGATA
AAGTGAAAGCGCAGAAGAAATCGGAAATGATGGAAATCAATCTTCAAAATAAGCGTCTTGGTAAGCAAGTATTTGAACTA
GAATCTGTTGGTATGCACTTTGATGATAAAGTACTATTTGAAAGCTTCAGTGATATTGTACAGACGACAGATCGTATCGG
TATTGTTGGTCAGAATGGCACTGGAAAGTCCACGCTATTGAATCTGCTTTCTGGAGAACTTACACCGGAAACGGGGACGA
TCAAAGTAGGCCAGACAGTGAGAGTAGGATATTACCGACAAGTAGAGATGGAACTGGAAAAAGATATGCGTATGATCGAC
TTTTTAAGAGAAAAAGCTGAAATAGGTTTCACTGCTACAGGTGAAAAGATTTCCGTTACGCAATTACTGGAACGCTTCTT
ATTTCCGTCCGCTGTTCACGGTACTTATATTAGTAAACTGAGTGGTGGAGAACGTAAGCGCCTCTATTTACTAAGTATAT
TGATTCAAGGACCTAACGTATTATTGCTGGATGAACCGACAAATGATCTGGATACAGAGACACTGACTGTCTTAGAACAG
TATCTTGAGTCATTTAAAGGCGCTGTCATCACGGTCAGCCATGACAGATATTTTCTGAATAAAGCAGTGACTTCCTACTG
GTATATACATGAAAATACAGTTCATAAAATACTAGGGGATTTTGAAGATTACCTGGACTTCAAATCACAGATAGAGAAAA
GTATTACCATACAGACACCCGAGAAAAGTGAGAAACATAAAAATCAAGAAAAGGGAACAAAACGTGTATCCTATAAAGAC
AAACGTCGCTTTGAATTTTTGACAGATGCGATTGAATCGTTAGAACAGGATATTGCAGATATCGATAGTGCAATTGCACA
AGAAACGACGAATTATGATAAACTCAATCAATTGACGACTGAACGTCAGGAGAAAGAAAGACTATATGAAACATACTTTG
AAGAATGGGATGAACTTTCTGCGCGAATGGAGTAG

Upstream 100 bases:

>100_bases
ATATTATATTGATATTTATTATACATAACTATATCATAAACATATTTAATGAGATATTGTTTCTTATATGAAATAAAGAA
AATAAATGGGAGTTTATATT

Downstream 100 bases:

>100_bases
ATTATGAAACACATATTACAAGAATATTTTGGTTATTCCAGCTTTAGGCCCGGACAGCAACAATTAATAGATTATGCGAT
AAATAATATTCCGACACTGG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 624; Mature: 624

Protein sequence:

>624_residues
MEAYKIENLTKQYGVKTVFENLSLSISTGDKIALVGINGTGKSALLKCIAEIEEHNGTVTHPNGFTIEYAAQSPVLDESL
SITDNVLDRAHPVMQLFKKYNHILKQMESDYNDTLAHELSEVQTQIEQMDGFTYRSSAEAILTKLGILNLEAPVTTLSGG
QKKRVALAKSLLKAPDLLLLDEPTNHLDFESIYWLIQFIKNYNKAVLVVTHDRYFLNEITNRIVELRNGKLYQYRGNYED
YIVQKAEDELILANQEQKERQLYKQELAWMRKGAKARTTKQQARIDRFSDIEDKVKAQKKSEMMEINLQNKRLGKQVFEL
ESVGMHFDDKVLFESFSDIVQTTDRIGIVGQNGTGKSTLLNLLSGELTPETGTIKVGQTVRVGYYRQVEMELEKDMRMID
FLREKAEIGFTATGEKISVTQLLERFLFPSAVHGTYISKLSGGERKRLYLLSILIQGPNVLLLDEPTNDLDTETLTVLEQ
YLESFKGAVITVSHDRYFLNKAVTSYWYIHENTVHKILGDFEDYLDFKSQIEKSITIQTPEKSEKHKNQEKGTKRVSYKD
KRRFEFLTDAIESLEQDIADIDSAIAQETTNYDKLNQLTTERQEKERLYETYFEEWDELSARME

Sequences:

>Translated_624_residues
MEAYKIENLTKQYGVKTVFENLSLSISTGDKIALVGINGTGKSALLKCIAEIEEHNGTVTHPNGFTIEYAAQSPVLDESL
SITDNVLDRAHPVMQLFKKYNHILKQMESDYNDTLAHELSEVQTQIEQMDGFTYRSSAEAILTKLGILNLEAPVTTLSGG
QKKRVALAKSLLKAPDLLLLDEPTNHLDFESIYWLIQFIKNYNKAVLVVTHDRYFLNEITNRIVELRNGKLYQYRGNYED
YIVQKAEDELILANQEQKERQLYKQELAWMRKGAKARTTKQQARIDRFSDIEDKVKAQKKSEMMEINLQNKRLGKQVFEL
ESVGMHFDDKVLFESFSDIVQTTDRIGIVGQNGTGKSTLLNLLSGELTPETGTIKVGQTVRVGYYRQVEMELEKDMRMID
FLREKAEIGFTATGEKISVTQLLERFLFPSAVHGTYISKLSGGERKRLYLLSILIQGPNVLLLDEPTNDLDTETLTVLEQ
YLESFKGAVITVSHDRYFLNKAVTSYWYIHENTVHKILGDFEDYLDFKSQIEKSITIQTPEKSEKHKNQEKGTKRVSYKD
KRRFEFLTDAIESLEQDIADIDSAIAQETTNYDKLNQLTTERQEKERLYETYFEEWDELSARME
>Mature_624_residues
MEAYKIENLTKQYGVKTVFENLSLSISTGDKIALVGINGTGKSALLKCIAEIEEHNGTVTHPNGFTIEYAAQSPVLDESL
SITDNVLDRAHPVMQLFKKYNHILKQMESDYNDTLAHELSEVQTQIEQMDGFTYRSSAEAILTKLGILNLEAPVTTLSGG
QKKRVALAKSLLKAPDLLLLDEPTNHLDFESIYWLIQFIKNYNKAVLVVTHDRYFLNEITNRIVELRNGKLYQYRGNYED
YIVQKAEDELILANQEQKERQLYKQELAWMRKGAKARTTKQQARIDRFSDIEDKVKAQKKSEMMEINLQNKRLGKQVFEL
ESVGMHFDDKVLFESFSDIVQTTDRIGIVGQNGTGKSTLLNLLSGELTPETGTIKVGQTVRVGYYRQVEMELEKDMRMID
FLREKAEIGFTATGEKISVTQLLERFLFPSAVHGTYISKLSGGERKRLYLLSILIQGPNVLLLDEPTNDLDTETLTVLEQ
YLESFKGAVITVSHDRYFLNKAVTSYWYIHENTVHKILGDFEDYLDFKSQIEKSITIQTPEKSEKHKNQEKGTKRVSYKD
KRRFEFLTDAIESLEQDIADIDSAIAQETTNYDKLNQLTTERQEKERLYETYFEEWDELSARME

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=530, Percent_Identity=30.188679245283, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI10947135, Length=543, Percent_Identity=31.4917127071823, Blast_Score=220, Evalue=3e-57,
Organism=Homo sapiens, GI69354671, Length=543, Percent_Identity=31.4917127071823, Blast_Score=220, Evalue=3e-57,
Organism=Homo sapiens, GI10947137, Length=560, Percent_Identity=28.0357142857143, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI27881506, Length=560, Percent_Identity=27.8571428571429, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI171184400, Length=241, Percent_Identity=28.6307053941909, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI2367384, Length=521, Percent_Identity=34.7408829174664, Blast_Score=313, Evalue=2e-86,
Organism=Escherichia coli, GI1787182, Length=620, Percent_Identity=31.7741935483871, Blast_Score=300, Evalue=1e-82,
Organism=Escherichia coli, GI1789751, Length=602, Percent_Identity=30.5647840531561, Blast_Score=288, Evalue=9e-79,
Organism=Escherichia coli, GI1787041, Length=529, Percent_Identity=31.3799621928166, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1788506, Length=536, Percent_Identity=24.2537313432836, Blast_Score=96, Evalue=8e-21,
Organism=Escherichia coli, GI1788225, Length=273, Percent_Identity=26.007326007326, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1789672, Length=264, Percent_Identity=25, Blast_Score=87, Evalue=5e-18,
Organism=Escherichia coli, GI1787029, Length=231, Percent_Identity=26.8398268398268, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1790544, Length=244, Percent_Identity=28.2786885245902, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1788644, Length=235, Percent_Identity=30.2127659574468, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI87081791, Length=240, Percent_Identity=27.9166666666667, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1790467, Length=246, Percent_Identity=27.6422764227642, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786872, Length=232, Percent_Identity=25.8620689655172, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786398, Length=237, Percent_Identity=26.1603375527426, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI145693107, Length=524, Percent_Identity=23.2824427480916, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1787105, Length=220, Percent_Identity=26.8181818181818, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789991, Length=496, Percent_Identity=20.9677419354839, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787089, Length=233, Percent_Identity=26.1802575107296, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=28.1914893617021, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1788897, Length=223, Percent_Identity=25.1121076233184, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1786253, Length=173, Percent_Identity=31.2138728323699, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1787164, Length=180, Percent_Identity=27.2222222222222, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1790525, Length=245, Percent_Identity=21.6326530612245, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI87081782, Length=166, Percent_Identity=30.1204819277108, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=543, Percent_Identity=30.5709023941068, Blast_Score=254, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI17553372, Length=541, Percent_Identity=31.2384473197782, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17555318, Length=556, Percent_Identity=27.6978417266187, Blast_Score=204, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI115534520, Length=280, Percent_Identity=27.8571428571429, Blast_Score=72, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=555, Percent_Identity=29.009009009009, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6321121, Length=542, Percent_Identity=28.7822878228782, Blast_Score=206, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6324314, Length=376, Percent_Identity=27.3936170212766, Blast_Score=134, Evalue=6e-32,
Organism=Saccharomyces cerevisiae, GI6323278, Length=387, Percent_Identity=26.3565891472868, Blast_Score=130, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6325030, Length=376, Percent_Identity=24.468085106383, Blast_Score=116, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6322640, Length=257, Percent_Identity=25.2918287937743, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24666836, Length=545, Percent_Identity=31.0091743119266, Blast_Score=236, Evalue=4e-62,
Organism=Drosophila melanogaster, GI24641342, Length=541, Percent_Identity=30.3142329020333, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24642252, Length=554, Percent_Identity=27.6173285198556, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI18859989, Length=554, Percent_Identity=27.6173285198556, Blast_Score=207, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 71781; Mature: 71781

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAYKIENLTKQYGVKTVFENLSLSISTGDKIALVGINGTGKSALLKCIAEIEEHNGTVT
CCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEE
HPNGFTIEYAAQSPVLDESLSITDNVLDRAHPVMQLFKKYNHILKQMESDYNDTLAHELS
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EVQTQIEQMDGFTYRSSAEAILTKLGILNLEAPVTTLSGGQKKRVALAKSLLKAPDLLLL
HHHHHHHHHCCCCCCCHHHHHHHHHCCEECCCCCEECCCCCHHHHHHHHHHHCCCCEEEE
DEPTNHLDFESIYWLIQFIKNYNKAVLVVTHDRYFLNEITNRIVELRNGKLYQYRGNYED
CCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCHH
YIVQKAEDELILANQEQKERQLYKQELAWMRKGAKARTTKQQARIDRFSDIEDKVKAQKK
HHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
SEMMEINLQNKRLGKQVFELESVGMHFDDKVLFESFSDIVQTTDRIGIVGQNGTGKSTLL
HHHHEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHH
NLLSGELTPETGTIKVGQTVRVGYYRQVEMELEKDMRMIDFLREKAEIGFTATGEKISVT
HHHCCCCCCCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEHH
QLLERFLFPSAVHGTYISKLSGGERKRLYLLSILIQGPNVLLLDEPTNDLDTETLTVLEQ
HHHHHHHCCCHHHHHHHHHCCCCCCHHEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHH
YLESFKGAVITVSHDRYFLNKAVTSYWYIHENTVHKILGDFEDYLDFKSQIEKSITIQTP
HHHHHCCEEEEEECCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECC
EKSEKHKNQEKGTKRVSYKDKRRFEFLTDAIESLEQDIADIDSAIAQETTNYDKLNQLTT
CCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ERQEKERLYETYFEEWDELSARME
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEAYKIENLTKQYGVKTVFENLSLSISTGDKIALVGINGTGKSALLKCIAEIEEHNGTVT
CCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEE
HPNGFTIEYAAQSPVLDESLSITDNVLDRAHPVMQLFKKYNHILKQMESDYNDTLAHELS
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EVQTQIEQMDGFTYRSSAEAILTKLGILNLEAPVTTLSGGQKKRVALAKSLLKAPDLLLL
HHHHHHHHHCCCCCCCHHHHHHHHHCCEECCCCCEECCCCCHHHHHHHHHHHCCCCEEEE
DEPTNHLDFESIYWLIQFIKNYNKAVLVVTHDRYFLNEITNRIVELRNGKLYQYRGNYED
CCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCHH
YIVQKAEDELILANQEQKERQLYKQELAWMRKGAKARTTKQQARIDRFSDIEDKVKAQKK
HHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
SEMMEINLQNKRLGKQVFELESVGMHFDDKVLFESFSDIVQTTDRIGIVGQNGTGKSTLL
HHHHEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHH
NLLSGELTPETGTIKVGQTVRVGYYRQVEMELEKDMRMIDFLREKAEIGFTATGEKISVT
HHHCCCCCCCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEHH
QLLERFLFPSAVHGTYISKLSGGERKRLYLLSILIQGPNVLLLDEPTNDLDTETLTVLEQ
HHHHHHHCCCHHHHHHHHHCCCCCCHHEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHH
YLESFKGAVITVSHDRYFLNKAVTSYWYIHENTVHKILGDFEDYLDFKSQIEKSITIQTP
HHHHHCCEEEEEECCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECC
EKSEKHKNQEKGTKRVSYKDKRRFEFLTDAIESLEQDIADIDSAIAQETTNYDKLNQLTT
CCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ERQEKERLYETYFEEWDELSARME
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]