| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is ina [H]
Identifier: 222150689
GI number: 222150689
Start: 466040
End: 467725
Strand: Direct
Name: ina [H]
Synonym: MCCL_0439
Alternate gene names: 222150689
Gene position: 466040-467725 (Clockwise)
Preceding gene: 222150688
Following gene: 222150690
Centisome position: 22.17
GC content: 36.71
Gene sequence:
>1686_bases GTGAAGCTTATAAAGTTGATTGTGAGTATTGGAATATGTTCATTAGCATTTACTTGTAATGTTCAGGCAACTGAGAAACA GCCAAATAATAATGTACAGTTGCAGAACGCTGAAAAAGTAAAGACAAAACCGATAATTACCCAGAAGAAGACAGTTCAGA CGAAAGCAATACCACCTTTTAAATCCAAACCTTATAACGGGCCGGTCATTAATGAAAATGTACTGGTTGTATTGATGGAT TTTAGTAATGCACCGCATGGAAAGCTTACGCAGAAGGATACCGAAAATTATATAAAATCATATGATAGGAAATACTATCA AGACCTGTTCTTCGGTAAGAATGTCACAGGTCCAGGAGGATACAAATATCAATCACTTAAATCCTATTATAATAGTGCAT CTAGTGGTAGTCTGTCATTAACAGGGCAAGTAGCAGGATGGTATCGTGCGAAACATCCGATTCAATATTACGGCGCTAAC AATGATGCGCGGGCTTCTGAGCTGGTTATGGAAGCAGCAGCAAAAGTTGCTAAAGATAAAAGGATTGATATGAAACGCTA TGACAGATTTGATTATTATGATCTTGATAAAGATAAAAAAGTAAATGAACCCGATGGTATTATCGATAAGTTTGTTGTTG TATATAGTGGTATCGGTGAAAGCGAAGGCGGCGGGAAATTTGGGCAGAATACAATCTGGGAACATGTTTCCGAAGTACCA TTCACTAAAGATAATAAGCCGTCAATAATTCCTGGAACCTATAGCAAGACTTCAAAGTTTTTAAAGAAACGACTTGCAAT TGCAGAATATGGCATGATATCTGAAGACAGTACAGTAGGAACAGTAGCACATGAGTTCGGACATATGCTTGGTCTACCTG ATGAATATGACACAGCAAGTAGCTCGGTGAGTCATGCAGGTGAACCCGTTCGTTACTGGTCGCTTATGAGTTATGGTAAA GATGCCGGAAAGATTCCTGGATTGAATCCTGTCAGTATGAGCCCTTATGCTAAGATGCTTATTCAGAGAATCTACGGTGG TAACTGGATTCGTATCAATGAAGTAGATTATAAGCAGATTAGTTCGAAGAAAAAGTATTACTTGCTGGATCAATCTGCTT ATAAAGGACAGAACAATAACGTCATTAAAGTAAACTTGCCTCCGCTACAAAAGAAAGTAAAGGGTAAGCTAAAGAGCTAT AAGCGCTATTATTTAATTGAGTGGAGGAATCATACAGGTTTAGATATCGGTTTATCGAGAATTAAAGATTCTTTTGGCAT AAATAAATATGGTAAAGGAATGCTTGTGTGGTATGTGAATGAATATTATAAAGATAATAGTAATTTATCTAAACATTTTG GTGAAAGTTTGATTGGCGTAGTCGATGCGAGTCCTGGAAATATCCGTACTGCTGGTGGATATATGCCGATGACAGATATA CAAATTTTTGATGCGCCATTCAATACAAGATCGTTTGGGCAATACAATTCGAATAAAAACTACTTCTTCAAGAAGAAATC TACAGCACCAGTACTACTTTTTGATGACAGGAATTATTCGAAAAAAGCGATGTTAAATATGCAGGCCCCAGATAGTAGCC GTGTATTACCTCAACTTGGTATTAAAATTAAAGTAGAAGACCAAAATAAAGAAGGTACTGTCGGAAAGATCAGTATATAT AAATAA
Upstream 100 bases:
>100_bases CAAGAGAAACATCACATTCAGTTACGATTAAAGTGTATGTGAAAGGACGAATGATTGATAGTAAGCGTATAGACATAAAT AGCTGAAAAGAGGTCGGACA
Downstream 100 bases:
>100_bases GGGGTAATCGATGACATACTTTGAAACGGAACGTCTCATTTTTAGAAATTGGCATAACGCAGATCTTGCGCATTATATTG AACTGAACCGGAATTTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues MKLIKLIVSIGICSLAFTCNVQATEKQPNNNVQLQNAEKVKTKPIITQKKTVQTKAIPPFKSKPYNGPVINENVLVVLMD FSNAPHGKLTQKDTENYIKSYDRKYYQDLFFGKNVTGPGGYKYQSLKSYYNSASSGSLSLTGQVAGWYRAKHPIQYYGAN NDARASELVMEAAAKVAKDKRIDMKRYDRFDYYDLDKDKKVNEPDGIIDKFVVVYSGIGESEGGGKFGQNTIWEHVSEVP FTKDNKPSIIPGTYSKTSKFLKKRLAIAEYGMISEDSTVGTVAHEFGHMLGLPDEYDTASSSVSHAGEPVRYWSLMSYGK DAGKIPGLNPVSMSPYAKMLIQRIYGGNWIRINEVDYKQISSKKKYYLLDQSAYKGQNNNVIKVNLPPLQKKVKGKLKSY KRYYLIEWRNHTGLDIGLSRIKDSFGINKYGKGMLVWYVNEYYKDNSNLSKHFGESLIGVVDASPGNIRTAGGYMPMTDI QIFDAPFNTRSFGQYNSNKNYFFKKKSTAPVLLFDDRNYSKKAMLNMQAPDSSRVLPQLGIKIKVEDQNKEGTVGKISIY K
Sequences:
>Translated_561_residues MKLIKLIVSIGICSLAFTCNVQATEKQPNNNVQLQNAEKVKTKPIITQKKTVQTKAIPPFKSKPYNGPVINENVLVVLMD FSNAPHGKLTQKDTENYIKSYDRKYYQDLFFGKNVTGPGGYKYQSLKSYYNSASSGSLSLTGQVAGWYRAKHPIQYYGAN NDARASELVMEAAAKVAKDKRIDMKRYDRFDYYDLDKDKKVNEPDGIIDKFVVVYSGIGESEGGGKFGQNTIWEHVSEVP FTKDNKPSIIPGTYSKTSKFLKKRLAIAEYGMISEDSTVGTVAHEFGHMLGLPDEYDTASSSVSHAGEPVRYWSLMSYGK DAGKIPGLNPVSMSPYAKMLIQRIYGGNWIRINEVDYKQISSKKKYYLLDQSAYKGQNNNVIKVNLPPLQKKVKGKLKSY KRYYLIEWRNHTGLDIGLSRIKDSFGINKYGKGMLVWYVNEYYKDNSNLSKHFGESLIGVVDASPGNIRTAGGYMPMTDI QIFDAPFNTRSFGQYNSNKNYFFKKKSTAPVLLFDDRNYSKKAMLNMQAPDSSRVLPQLGIKIKVEDQNKEGTVGKISIY K >Mature_561_residues MKLIKLIVSIGICSLAFTCNVQATEKQPNNNVQLQNAEKVKTKPIITQKKTVQTKAIPPFKSKPYNGPVINENVLVVLMD FSNAPHGKLTQKDTENYIKSYDRKYYQDLFFGKNVTGPGGYKYQSLKSYYNSASSGSLSLTGQVAGWYRAKHPIQYYGAN NDARASELVMEAAAKVAKDKRIDMKRYDRFDYYDLDKDKKVNEPDGIIDKFVVVYSGIGESEGGGKFGQNTIWEHVSEVP FTKDNKPSIIPGTYSKTSKFLKKRLAIAEYGMISEDSTVGTVAHEFGHMLGLPDEYDTASSSVSHAGEPVRYWSLMSYGK DAGKIPGLNPVSMSPYAKMLIQRIYGGNWIRINEVDYKQISSKKKYYLLDQSAYKGQNNNVIKVNLPPLQKKVKGKLKSY KRYYLIEWRNHTGLDIGLSRIKDSFGINKYGKGMLVWYVNEYYKDNSNLSKHFGESLIGVVDASPGNIRTAGGYMPMTDI QIFDAPFNTRSFGQYNSNKNYFFKKKSTAPVLLFDDRNYSKKAMLNMQAPDSSRVLPQLGIKIKVEDQNKEGTVGKISIY K
Specific function: Neutral metalloprotease that is secreted to degrade antibacterial proteins produced by the insect host for its defense (attacins and cecropins). Probably degrades some unknown crucial protein(s) too, since it is toxic when injected to insect larvae [H]
COG id: COG4412
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012300 - InterPro: IPR008757 [H]
Pfam domain/function: PF05547 Peptidase_M6 [H]
EC number: NA
Molecular weight: Translated: 63299; Mature: 63299
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIKLIVSIGICSLAFTCNVQATEKQPNNNVQLQNAEKVKTKPIITQKKTVQTKAIPPF CHHHHHHHHHHHHHEEEEECEEECCCCCCCCEEECCCHHCCCCCCEECCHHHHHCCCCCC KSKPYNGPVINENVLVVLMDFSNAPHGKLTQKDTENYIKSYDRKYYQDLFFGKNVTGPGG CCCCCCCCEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC YKYQSLKSYYNSASSGSLSLTGQVAGWYRAKHPIQYYGANNDARASELVMEAAAKVAKDK CCHHHHHHHHCCCCCCCEEEEEEECCHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHC RIDMKRYDRFDYYDLDKDKKVNEPDGIIDKFVVVYSGIGESEGGGKFGQNTIWEHVSEVP CCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC FTKDNKPSIIPGTYSKTSKFLKKRLAIAEYGMISEDSTVGTVAHEFGHMLGLPDEYDTAS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCH SSVSHAGEPVRYWSLMSYGKDAGKIPGLNPVSMSPYAKMLIQRIYGGNWIRINEVDYKQI HHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHH SSKKKYYLLDQSAYKGQNNNVIKVNLPPLQKKVKGKLKSYKRYYLIEWRNHTGLDIGLSR CCCCCEEEEECHHCCCCCCCEEEEECCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH IKDSFGINKYGKGMLVWYVNEYYKDNSNLSKHFGESLIGVVDASPGNIRTAGGYMPMTDI HHHHCCCCCCCCEEEEEEEEHHHCCCCCHHHHHCCCEEEEEECCCCCEEECCCCCCCCCE QIFDAPFNTRSFGQYNSNKNYFFKKKSTAPVLLFDDRNYSKKAMLNMQAPDSSRVLPQLG EEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHCC IKIKVEDQNKEGTVGKISIYK CEEEEECCCCCCCEEEEEEEC >Mature Secondary Structure MKLIKLIVSIGICSLAFTCNVQATEKQPNNNVQLQNAEKVKTKPIITQKKTVQTKAIPPF CHHHHHHHHHHHHHEEEEECEEECCCCCCCCEEECCCHHCCCCCCEECCHHHHHCCCCCC KSKPYNGPVINENVLVVLMDFSNAPHGKLTQKDTENYIKSYDRKYYQDLFFGKNVTGPGG CCCCCCCCEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC YKYQSLKSYYNSASSGSLSLTGQVAGWYRAKHPIQYYGANNDARASELVMEAAAKVAKDK CCHHHHHHHHCCCCCCCEEEEEEECCHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHC RIDMKRYDRFDYYDLDKDKKVNEPDGIIDKFVVVYSGIGESEGGGKFGQNTIWEHVSEVP CCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC FTKDNKPSIIPGTYSKTSKFLKKRLAIAEYGMISEDSTVGTVAHEFGHMLGLPDEYDTAS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCH SSVSHAGEPVRYWSLMSYGKDAGKIPGLNPVSMSPYAKMLIQRIYGGNWIRINEVDYKQI HHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHH SSKKKYYLLDQSAYKGQNNNVIKVNLPPLQKKVKGKLKSYKRYYLIEWRNHTGLDIGLSR CCCCCEEEEECHHCCCCCCCEEEEECCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH IKDSFGINKYGKGMLVWYVNEYYKDNSNLSKHFGESLIGVVDASPGNIRTAGGYMPMTDI HHHHCCCCCCCCEEEEEEEEHHHCCCCCHHHHHCCCEEEEEECCCCCEEECCCCCCCCCE QIFDAPFNTRSFGQYNSNKNYFFKKKSTAPVLLFDDRNYSKKAMLNMQAPDSSRVLPQLG EEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHCC IKIKVEDQNKEGTVGKISIYK CEEEEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2089225; 6421577 [H]