| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yeeN [C]
Identifier: 222150659
GI number: 222150659
Start: 436911
End: 437633
Strand: Direct
Name: yeeN [C]
Synonym: MCCL_0409
Alternate gene names: 222150659
Gene position: 436911-437633 (Clockwise)
Preceding gene: 222150658
Following gene: 222150660
Centisome position: 20.78
GC content: 40.66
Gene sequence:
>723_bases GTGTATATTATGGGTCGTAAATGGAACAATATTAAAGATAAGAAAGCTGCAAAGGACAAGAATACGAGTAGAATCTATGC GAAATTCGGTCGTGAAATCTATGTTGCAGCAAAGTCTGGTGAGCCAGATCCTGAATCGAACCAAAACTTGAAATTCGTTC TTGAACGTGCAAAAACATACTCTGTACCGAAACATATTATTGATCGTGCTATCGAGAAAGCTAAAGGTGGTGCAGAAGAG AACTACGACGAACTACGCTATGAGGGATTTGGTCCTGGTGGTTCGATGTTAATTGTAGATGCCCTTACAAACAACGTTAA CCGTACAGCGAGTGATGTTCGTGCAGCATTTGGTAAGAACGGGGGTAATATGGGGGTATCCGGTTCAGTAAGTTATATGT TTGATAATACTGCGGTGTTTGGATTTGGTGGTAAGAGTGCAGATGAAACGCTGGAAATCCTGATGGAAGCAGATATTGAT GTACGCGATGTAATGGAAGAGGATGGACAGGTTATTGTCTATGCAGAACCTGATCAATTTGCAGCAGTGCAGAATACATT GAAAGAAGCGGGCATTGAAGAATTTACTGTAGCTGAACTTTCGATGGCACCTCAGACTGAATTAGACTTATCTGACTCCG ACTTAGAAGTATTTGAAAAGTTAGTAGACGCGATTGAAGATTTAGAAGACGTACAGACTGTACACCATAATGTAAATGCA TAA
Upstream 100 bases:
>100_bases TTAGCAAGTATTTTAAAAGATTAAAGGCACATGCCTTTAATCTTTTTTGTGTAATGAAGGATTAATGTGTATAATAATGA CATAAATTATTGAAAGAGAA
Downstream 100 bases:
>100_bases TATGTAAGCACTGAAGCGATTTCAGTGCTTTTTTAGGAGGTATTATGAATAAACAGGATTTTATAGAGACGTTGCAATTA CAACCACATCCAGAAGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MYIMGRKWNNIKDKKAAKDKNTSRIYAKFGREIYVAAKSGEPDPESNQNLKFVLERAKTYSVPKHIIDRAIEKAKGGAEE NYDELRYEGFGPGGSMLIVDALTNNVNRTASDVRAAFGKNGGNMGVSGSVSYMFDNTAVFGFGGKSADETLEILMEADID VRDVMEEDGQVIVYAEPDQFAAVQNTLKEAGIEEFTVAELSMAPQTELDLSDSDLEVFEKLVDAIEDLEDVQTVHHNVNA
Sequences:
>Translated_240_residues MYIMGRKWNNIKDKKAAKDKNTSRIYAKFGREIYVAAKSGEPDPESNQNLKFVLERAKTYSVPKHIIDRAIEKAKGGAEE NYDELRYEGFGPGGSMLIVDALTNNVNRTASDVRAAFGKNGGNMGVSGSVSYMFDNTAVFGFGGKSADETLEILMEADID VRDVMEEDGQVIVYAEPDQFAAVQNTLKEAGIEEFTVAELSMAPQTELDLSDSDLEVFEKLVDAIEDLEDVQTVHHNVNA >Mature_240_residues MYIMGRKWNNIKDKKAAKDKNTSRIYAKFGREIYVAAKSGEPDPESNQNLKFVLERAKTYSVPKHIIDRAIEKAKGGAEE NYDELRYEGFGPGGSMLIVDALTNNVNRTASDVRAAFGKNGGNMGVSGSVSYMFDNTAVFGFGGKSADETLEILMEADID VRDVMEEDGQVIVYAEPDQFAAVQNTLKEAGIEEFTVAELSMAPQTELDLSDSDLEVFEKLVDAIEDLEDVQTVHHNVNA
Specific function: Unknown
COG id: COG0217
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TACO1 family [H]
Homologues:
Organism=Homo sapiens, GI27545315, Length=242, Percent_Identity=30.9917355371901, Blast_Score=114, Evalue=6e-26, Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=60.8510638297872, Blast_Score=296, Evalue=9e-82, Organism=Escherichia coli, GI1788171, Length=233, Percent_Identity=36.9098712446352, Blast_Score=162, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6321458, Length=262, Percent_Identity=32.0610687022901, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002876 - InterPro: IPR017856 [H]
Pfam domain/function: PF01709 DUF28 [H]
EC number: NA
Molecular weight: Translated: 26462; Mature: 26462
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIMGRKWNNIKDKKAAKDKNTSRIYAKFGREIYVAAKSGEPDPESNQNLKFVLERAKTY CEECCCCCCCCCHHHHHCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHC SVPKHIIDRAIEKAKGGAEENYDELRYEGFGPGGSMLIVDALTNNVNRTASDVRAAFGKN CCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHCCC GGNMGVSGSVSYMFDNTAVFGFGGKSADETLEILMEADIDVRDVMEEDGQVIVYAEPDQF CCCCCCCCCEEEEEECEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCHH AAVQNTLKEAGIEEFTVAELSMAPQTELDLSDSDLEVFEKLVDAIEDLEDVQTVHHNVNA HHHHHHHHHCCCCCEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYIMGRKWNNIKDKKAAKDKNTSRIYAKFGREIYVAAKSGEPDPESNQNLKFVLERAKTY CEECCCCCCCCCHHHHHCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHC SVPKHIIDRAIEKAKGGAEENYDELRYEGFGPGGSMLIVDALTNNVNRTASDVRAAFGKN CCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHCCC GGNMGVSGSVSYMFDNTAVFGFGGKSADETLEILMEADIDVRDVMEEDGQVIVYAEPDQF CCCCCCCCCEEEEEECEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCHH AAVQNTLKEAGIEEFTVAELSMAPQTELDLSDSDLEVFEKLVDAIEDLEDVQTVHHNVNA HHHHHHHHHCCCCCEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA