| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150658
Identifier: 222150658
GI number: 222150658
Start: 436199
End: 436834
Strand: Direct
Name: 222150658
Synonym: MCCL_0408
Alternate gene names: NA
Gene position: 436199-436834 (Clockwise)
Preceding gene: 222150657
Following gene: 222150659
Centisome position: 20.75
GC content: 36.48
Gene sequence:
>636_bases ATGAATAATTATTATAATGCACAACCTGTGACACGCGCGTCAGCGTACCGTCAAACGTTTTTATTCTTTATGTATTACTG GATCATCTTTGCGGTAGGAACATATTTAGGACAATTTGTGCCAGCGGGATTAAGATTCACAGTTTCTATGGCAATTTTTG CACTTGTAATGTTATCGTTATTCGTGCGTGCTTCACGTAAGTTTGGATTCTTAATTTCTAACTTAATGGCGTTTGGTATG GGGATTGTAAGTTACGGTACATTCATGTACTACATGTCAACGTTAGGTGAAGCTGCTTTCTATCAAAACGTGGCACTTGC TGTAGGAGCATTCTTAGCTTTCGGTTTAGTTGGATACTTTGTAGTAGGTGATGCATCTAACTTGGGACGTCTTTTATTCC CGGCATTAATTGCGTTAGTATTCGCAAGTTTCTTAGGTATATTCATTCAAATACCGATGTTCCAGATGGTGATTACAATT GCAGGGCTTGCAATCTTCTTCTTGTATACAGTATATGACTTTAACCGTTTAAAACAAGGGAACTTCTCACCACAGGAGAT GGGATTTAGCTTATTTATCAACCTATTGAATATCATTTTAGATATTTTACGATTAGCAAGTATTTTAAAAGATTAA
Upstream 100 bases:
>100_bases TTTATTATGATTTTCAGCCTGTTTGTATAATCAAATCACTCGTAAATATAAGTTGTAAACTGTATAATCATTATATAACA TTAGTTAAATGAGGGATTAT
Downstream 100 bases:
>100_bases AGGCACATGCCTTTAATCTTTTTTGTGTAATGAAGGATTAATGTGTATAATAATGACATAAATTATTGAAAGAGAAGTGT ATATTATGGGTCGTAAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MNNYYNAQPVTRASAYRQTFLFFMYYWIIFAVGTYLGQFVPAGLRFTVSMAIFALVMLSLFVRASRKFGFLISNLMAFGM GIVSYGTFMYYMSTLGEAAFYQNVALAVGAFLAFGLVGYFVVGDASNLGRLLFPALIALVFASFLGIFIQIPMFQMVITI AGLAIFFLYTVYDFNRLKQGNFSPQEMGFSLFINLLNIILDILRLASILKD
Sequences:
>Translated_211_residues MNNYYNAQPVTRASAYRQTFLFFMYYWIIFAVGTYLGQFVPAGLRFTVSMAIFALVMLSLFVRASRKFGFLISNLMAFGM GIVSYGTFMYYMSTLGEAAFYQNVALAVGAFLAFGLVGYFVVGDASNLGRLLFPALIALVFASFLGIFIQIPMFQMVITI AGLAIFFLYTVYDFNRLKQGNFSPQEMGFSLFINLLNIILDILRLASILKD >Mature_211_residues MNNYYNAQPVTRASAYRQTFLFFMYYWIIFAVGTYLGQFVPAGLRFTVSMAIFALVMLSLFVRASRKFGFLISNLMAFGM GIVSYGTFMYYMSTLGEAAFYQNVALAVGAFLAFGLVGYFVVGDASNLGRLLFPALIALVFASFLGIFIQIPMFQMVITI AGLAIFFLYTVYDFNRLKQGNFSPQEMGFSLFINLLNIILDILRLASILKD
Specific function: Unknown
COG id: COG0670
COG function: function code R; Integral membrane protein, interacts with FtsH
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23714; Mature: 23714
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNYYNAQPVTRASAYRQTFLFFMYYWIIFAVGTYLGQFVPAGLRFTVSMAIFALVMLSL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH FVRASRKFGFLISNLMAFGMGIVSYGTFMYYMSTLGEAAFYQNVALAVGAFLAFGLVGYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGDASNLGRLLFPALIALVFASFLGIFIQIPMFQMVITIAGLAIFFLYTVYDFNRLKQG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NFSPQEMGFSLFINLLNIILDILRLASILKD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNYYNAQPVTRASAYRQTFLFFMYYWIIFAVGTYLGQFVPAGLRFTVSMAIFALVMLSL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH FVRASRKFGFLISNLMAFGMGIVSYGTFMYYMSTLGEAAFYQNVALAVGAFLAFGLVGYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGDASNLGRLLFPALIALVFASFLGIFIQIPMFQMVITIAGLAIFFLYTVYDFNRLKQG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NFSPQEMGFSLFINLLNIILDILRLASILKD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA