Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

Click here to switch to the map view.

The map label for this gene is 222150658

Identifier: 222150658

GI number: 222150658

Start: 436199

End: 436834

Strand: Direct

Name: 222150658

Synonym: MCCL_0408

Alternate gene names: NA

Gene position: 436199-436834 (Clockwise)

Preceding gene: 222150657

Following gene: 222150659

Centisome position: 20.75

GC content: 36.48

Gene sequence:

>636_bases
ATGAATAATTATTATAATGCACAACCTGTGACACGCGCGTCAGCGTACCGTCAAACGTTTTTATTCTTTATGTATTACTG
GATCATCTTTGCGGTAGGAACATATTTAGGACAATTTGTGCCAGCGGGATTAAGATTCACAGTTTCTATGGCAATTTTTG
CACTTGTAATGTTATCGTTATTCGTGCGTGCTTCACGTAAGTTTGGATTCTTAATTTCTAACTTAATGGCGTTTGGTATG
GGGATTGTAAGTTACGGTACATTCATGTACTACATGTCAACGTTAGGTGAAGCTGCTTTCTATCAAAACGTGGCACTTGC
TGTAGGAGCATTCTTAGCTTTCGGTTTAGTTGGATACTTTGTAGTAGGTGATGCATCTAACTTGGGACGTCTTTTATTCC
CGGCATTAATTGCGTTAGTATTCGCAAGTTTCTTAGGTATATTCATTCAAATACCGATGTTCCAGATGGTGATTACAATT
GCAGGGCTTGCAATCTTCTTCTTGTATACAGTATATGACTTTAACCGTTTAAAACAAGGGAACTTCTCACCACAGGAGAT
GGGATTTAGCTTATTTATCAACCTATTGAATATCATTTTAGATATTTTACGATTAGCAAGTATTTTAAAAGATTAA

Upstream 100 bases:

>100_bases
TTTATTATGATTTTCAGCCTGTTTGTATAATCAAATCACTCGTAAATATAAGTTGTAAACTGTATAATCATTATATAACA
TTAGTTAAATGAGGGATTAT

Downstream 100 bases:

>100_bases
AGGCACATGCCTTTAATCTTTTTTGTGTAATGAAGGATTAATGTGTATAATAATGACATAAATTATTGAAAGAGAAGTGT
ATATTATGGGTCGTAAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNNYYNAQPVTRASAYRQTFLFFMYYWIIFAVGTYLGQFVPAGLRFTVSMAIFALVMLSLFVRASRKFGFLISNLMAFGM
GIVSYGTFMYYMSTLGEAAFYQNVALAVGAFLAFGLVGYFVVGDASNLGRLLFPALIALVFASFLGIFIQIPMFQMVITI
AGLAIFFLYTVYDFNRLKQGNFSPQEMGFSLFINLLNIILDILRLASILKD

Sequences:

>Translated_211_residues
MNNYYNAQPVTRASAYRQTFLFFMYYWIIFAVGTYLGQFVPAGLRFTVSMAIFALVMLSLFVRASRKFGFLISNLMAFGM
GIVSYGTFMYYMSTLGEAAFYQNVALAVGAFLAFGLVGYFVVGDASNLGRLLFPALIALVFASFLGIFIQIPMFQMVITI
AGLAIFFLYTVYDFNRLKQGNFSPQEMGFSLFINLLNIILDILRLASILKD
>Mature_211_residues
MNNYYNAQPVTRASAYRQTFLFFMYYWIIFAVGTYLGQFVPAGLRFTVSMAIFALVMLSLFVRASRKFGFLISNLMAFGM
GIVSYGTFMYYMSTLGEAAFYQNVALAVGAFLAFGLVGYFVVGDASNLGRLLFPALIALVFASFLGIFIQIPMFQMVITI
AGLAIFFLYTVYDFNRLKQGNFSPQEMGFSLFINLLNIILDILRLASILKD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23714; Mature: 23714

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNYYNAQPVTRASAYRQTFLFFMYYWIIFAVGTYLGQFVPAGLRFTVSMAIFALVMLSL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
FVRASRKFGFLISNLMAFGMGIVSYGTFMYYMSTLGEAAFYQNVALAVGAFLAFGLVGYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVGDASNLGRLLFPALIALVFASFLGIFIQIPMFQMVITIAGLAIFFLYTVYDFNRLKQG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NFSPQEMGFSLFINLLNIILDILRLASILKD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNYYNAQPVTRASAYRQTFLFFMYYWIIFAVGTYLGQFVPAGLRFTVSMAIFALVMLSL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
FVRASRKFGFLISNLMAFGMGIVSYGTFMYYMSTLGEAAFYQNVALAVGAFLAFGLVGYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVGDASNLGRLLFPALIALVFASFLGIFIQIPMFQMVITIAGLAIFFLYTVYDFNRLKQG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NFSPQEMGFSLFINLLNIILDILRLASILKD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA