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The map label for this gene is iap [H]

Identifier: 222150641

GI number: 222150641

Start: 420974

End: 421603

Strand: Direct

Name: iap [H]

Synonym: MCCL_0391

Alternate gene names: 222150641

Gene position: 420974-421603 (Clockwise)

Preceding gene: 222150639

Following gene: 222150642

Centisome position: 20.02

GC content: 41.11

Gene sequence:

>630_bases
ATGAAAAAGACAGCATTAACTTTAACGACACTTGCAACATTATCGACTTTAGGTACAGCTCAAGCTGATGCGGCGGCGCA
TGGTAGAACAGATGTTGCTCAAACTTCATCTTCAGTAAGTTCAATTGATTCAAGTGCATATGACTATACATATAATAATG
ATGGTTCATATACTTATAGCTATGACGCACCTACTTCAGTAGTTGCACAAACAGCTACACAAGCAGCACCTGTAGTGTCA
CAAACTTCTACAACTACAGAAGTGAAGAAAGCTCCTGCAACAACGGCAGTTAGCGGAAATGTTGCATCTGTAGCATTAAG
TGTTGCAGCTGGTAAATCTTATGTATATGGTGCGAACTCTGCTTCAGCAGTAGATTGTTCATCATTTGCACAACAAGTAT
TAGCAGCAATGGGGAAATCAATTCCTCGTACTACTTATGCACAAGCAGCAGCAGGTACACAAGTATCAGCACCACAACCA
GGTGACTTAGTATTCTTCAATAACTACAGCCACGTTGGTGTATATATTGGCGGAGGACAAATGGTAGATGCATTAAATCC
TTCTGAAGGTGTCGGACAACGTGCGGTAAGTTATGTTAGTGGACATGTAGACGGATACTACCGTTTCTAA

Upstream 100 bases:

>100_bases
ATGTTATAGTATTTTCAGTGCTCAAGAGCGCAGTAAAAAATTAAAAACTAATCTAAACTATTTTAATATAACGATTATAT
TACACGGAGGAATTTTAACT

Downstream 100 bases:

>100_bases
GATTAAGCATTTTAAGGCGCAGTGCATTCGCACTGCGCCTTTTTTATATTTAACTTTATTAATTCTATGGTGTATATTAC
AATCAAATAAATATGGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKKTALTLTTLATLSTLGTAQADAAAHGRTDVAQTSSSVSSIDSSAYDYTYNNDGSYTYSYDAPTSVVAQTATQAAPVVS
QTSTTTEVKKAPATTAVSGNVASVALSVAAGKSYVYGANSASAVDCSSFAQQVLAAMGKSIPRTTYAQAAAGTQVSAPQP
GDLVFFNNYSHVGVYIGGGQMVDALNPSEGVGQRAVSYVSGHVDGYYRF

Sequences:

>Translated_209_residues
MKKTALTLTTLATLSTLGTAQADAAAHGRTDVAQTSSSVSSIDSSAYDYTYNNDGSYTYSYDAPTSVVAQTATQAAPVVS
QTSTTTEVKKAPATTAVSGNVASVALSVAAGKSYVYGANSASAVDCSSFAQQVLAAMGKSIPRTTYAQAAAGTQVSAPQP
GDLVFFNNYSHVGVYIGGGQMVDALNPSEGVGQRAVSYVSGHVDGYYRF
>Mature_209_residues
MKKTALTLTTLATLSTLGTAQADAAAHGRTDVAQTSSSVSSIDSSAYDYTYNNDGSYTYSYDAPTSVVAQTATQAAPVVS
QTSTTTEVKKAPATTAVSGNVASVALSVAAGKSYVYGANSASAVDCSSFAQQVLAAMGKSIPRTTYAQAAAGTQVSAPQP
GDLVFFNNYSHVGVYIGGGQMVDALNPSEGVGQRAVSYVSGHVDGYYRF

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 21319; Mature: 21319

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTALTLTTLATLSTLGTAQADAAAHGRTDVAQTSSSVSSIDSSAYDYTYNNDGSYTYS
CCCHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEE
YDAPTSVVAQTATQAAPVVSQTSTTTEVKKAPATTAVSGNVASVALSVAAGKSYVYGANS
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEECCCHHHEEEEEECCCEEEEECCC
ASAVDCSSFAQQVLAAMGKSIPRTTYAQAAAGTQVSAPQPGDLVFFNNYSHVGVYIGGGQ
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEECCCE
MVDALNPSEGVGQRAVSYVSGHVDGYYRF
EEECCCCCCCHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MKKTALTLTTLATLSTLGTAQADAAAHGRTDVAQTSSSVSSIDSSAYDYTYNNDGSYTYS
CCCHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEE
YDAPTSVVAQTATQAAPVVSQTSTTTEVKKAPATTAVSGNVASVALSVAAGKSYVYGANS
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEECCCHHHEEEEEECCCEEEEECCC
ASAVDCSSFAQQVLAAMGKSIPRTTYAQAAAGTQVSAPQPGDLVFFNNYSHVGVYIGGGQ
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEECCCE
MVDALNPSEGVGQRAVSYVSGHVDGYYRF
EEECCCCCCCHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1514809; 1459966 [H]