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The map label for this gene is ycjS [H]

Identifier: 222150609

GI number: 222150609

Start: 375807

End: 376853

Strand: Direct

Name: ycjS [H]

Synonym: MCCL_0359

Alternate gene names: 222150609

Gene position: 375807-376853 (Clockwise)

Preceding gene: 222150608

Following gene: 222150610

Centisome position: 17.88

GC content: 36.96

Gene sequence:

>1047_bases
ATGGAACAATTAAAGATTGGTATCGTTGGAGCAGGAGGAATCGCAACAGGTAGACACATCCCTACATTCCAGCAGTTCCA
GGAAGTTAGTGTAAGTCATATTTATGATATCGATGCTGAGAAAGCAAAGATTGTGGCAACTGAGTTTGGTATAGAATATG
TTTGTGATACGTATGAAGAAATGCTTGAATCAGTAGACGCAGTAATCATTACTACTCCGAACAAATTTCATGCACCATAT
ACAATCCAGGCACTCAATCGAGATGTCCATGTGATGTGTGAAAAACCGATGGCATTATCAAGTGAAGAGTGTGATGCGAT
GATTGGAGCAGAGGAACGTAGTGAAGGCGTATTACATATCGCATATCATTATCGTTTCATGAAAGAAGCAATAGCAGTCA
AACAAATCATTGATCAAGGCGTTATCGGCGAACCTCTTGTAATTAACGTAAAAGCAATGCGACGTCGTAAAGTACCTGGT
TGGGGTGTGTTTACGAATAAAGAGCTACAAGGTGGCGGTTCATTGATTGATTATGGTTGTCATCTACTAGATTTAGCGAT
GTGGTTAGCAGGAGATGTTAAACCTATTGAAGTAAATGGAACGACATATAATCGTTTAAGTAAAGACAACCATGACATCG
TTAATGAATGGGGAAATTTTGATGCATCCACTTTTGAAGTAGATGACCATGTTACAGCATATGTTAAGTTTGATAATCAG
GCTTCAATGTTATTTGAAACAAGTTGGGCGGCAAATATTGAACACGATGAAGAATTCATTAGTATAGCAGGTACTAAAGG
CGGCATTAATGTATTTGATATGAAATACAATACAGCTTCAGAAGGTTTGATGACGACAACCACGATAGATTACGTGCAGG
AGAAAAATACTTTTGAGTATTTACAGGCTAGCAATTTTATTAGAACAATCTTGCATGATTCAGTATTAAAAGTGAAGTCT
GTTGAAGCACGTAACGTATCTAAAATTATTGAAGCAATTTACTTAAGCAGTGCACAAAACAAAGCGATAAAAATTCAAAA
TAGTTAG

Upstream 100 bases:

>100_bases
TCAACCTGTACCAGTAAACGGGCAGGATGGATTAGCATCATTAAATGTAATCGTAAAAGCTTTGCAATCAGCACAAGAGA
AAAAAGTGGTGAAGATTTAA

Downstream 100 bases:

>100_bases
GAGAAGATCACGATGAAATTAGGCGTATTCAATCCTTTATTTAATGATTTATCATTTACAGAAATGTTAGATTATGCACA
TAAAGCAGGTTTAGAAGCGG

Product: NADH-dependent dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MEQLKIGIVGAGGIATGRHIPTFQQFQEVSVSHIYDIDAEKAKIVATEFGIEYVCDTYEEMLESVDAVIITTPNKFHAPY
TIQALNRDVHVMCEKPMALSSEECDAMIGAEERSEGVLHIAYHYRFMKEAIAVKQIIDQGVIGEPLVINVKAMRRRKVPG
WGVFTNKELQGGGSLIDYGCHLLDLAMWLAGDVKPIEVNGTTYNRLSKDNHDIVNEWGNFDASTFEVDDHVTAYVKFDNQ
ASMLFETSWAANIEHDEEFISIAGTKGGINVFDMKYNTASEGLMTTTTIDYVQEKNTFEYLQASNFIRTILHDSVLKVKS
VEARNVSKIIEAIYLSSAQNKAIKIQNS

Sequences:

>Translated_348_residues
MEQLKIGIVGAGGIATGRHIPTFQQFQEVSVSHIYDIDAEKAKIVATEFGIEYVCDTYEEMLESVDAVIITTPNKFHAPY
TIQALNRDVHVMCEKPMALSSEECDAMIGAEERSEGVLHIAYHYRFMKEAIAVKQIIDQGVIGEPLVINVKAMRRRKVPG
WGVFTNKELQGGGSLIDYGCHLLDLAMWLAGDVKPIEVNGTTYNRLSKDNHDIVNEWGNFDASTFEVDDHVTAYVKFDNQ
ASMLFETSWAANIEHDEEFISIAGTKGGINVFDMKYNTASEGLMTTTTIDYVQEKNTFEYLQASNFIRTILHDSVLKVKS
VEARNVSKIIEAIYLSSAQNKAIKIQNS
>Mature_348_residues
MEQLKIGIVGAGGIATGRHIPTFQQFQEVSVSHIYDIDAEKAKIVATEFGIEYVCDTYEEMLESVDAVIITTPNKFHAPY
TIQALNRDVHVMCEKPMALSSEECDAMIGAEERSEGVLHIAYHYRFMKEAIAVKQIIDQGVIGEPLVINVKAMRRRKVPG
WGVFTNKELQGGGSLIDYGCHLLDLAMWLAGDVKPIEVNGTTYNRLSKDNHDIVNEWGNFDASTFEVDDHVTAYVKFDNQ
ASMLFETSWAANIEHDEEFISIAGTKGGINVFDMKYNTASEGLMTTTTIDYVQEKNTFEYLQASNFIRTILHDSVLKVKS
VEARNVSKIIEAIYLSSAQNKAIKIQNS

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=346, Percent_Identity=30.9248554913295, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI87082405, Length=217, Percent_Identity=30.4147465437788, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI145693182, Length=225, Percent_Identity=23.1111111111111, Blast_Score=66, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581117, Length=241, Percent_Identity=28.2157676348548, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38907; Mature: 38907

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLKIGIVGAGGIATGRHIPTFQQFQEVSVSHIYDIDAEKAKIVATEFGIEYVCDTYEE
CCCEEEEEEECCCCCCCCCCCCHHHHHHCCHHHEEECCCCCEEEEEECCCHHHHHHHHHH
MLESVDAVIITTPNKFHAPYTIQALNRDVHVMCEKPMALSSEECDAMIGAEERSEGVLHI
HHHHCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEE
AYHYRFMKEAIAVKQIIDQGVIGEPLVINVKAMRRRKVPGWGVFTNKELQGGGSLIDYGC
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHCCCCCCCEEECCCCCCCCCHHHHHH
HLLDLAMWLAGDVKPIEVNGTTYNRLSKDNHDIVNEWGNFDASTFEVDDHVTAYVKFDNQ
HHHHHHHHHCCCCEEEEECCCCHHCCCCCCCHHHHHHCCCCCEEEEECCCEEEEEEECCC
ASMLFETSWAANIEHDEEFISIAGTKGGINVFDMKYNTASEGLMTTTTIDYVQEKNTFEY
CEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEHHHHHCCCHHHH
LQASNFIRTILHDSVLKVKSVEARNVSKIIEAIYLSSAQNKAIKIQNS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure
MEQLKIGIVGAGGIATGRHIPTFQQFQEVSVSHIYDIDAEKAKIVATEFGIEYVCDTYEE
CCCEEEEEEECCCCCCCCCCCCHHHHHHCCHHHEEECCCCCEEEEEECCCHHHHHHHHHH
MLESVDAVIITTPNKFHAPYTIQALNRDVHVMCEKPMALSSEECDAMIGAEERSEGVLHI
HHHHCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEE
AYHYRFMKEAIAVKQIIDQGVIGEPLVINVKAMRRRKVPGWGVFTNKELQGGGSLIDYGC
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHCCCCCCCEEECCCCCCCCCHHHHHH
HLLDLAMWLAGDVKPIEVNGTTYNRLSKDNHDIVNEWGNFDASTFEVDDHVTAYVKFDNQ
HHHHHHHHHCCCCEEEEECCCCHHCCCCCCCHHHHHHCCCCCEEEEECCCEEEEEEECCC
ASMLFETSWAANIEHDEEFISIAGTKGGINVFDMKYNTASEGLMTTTTIDYVQEKNTFEY
CEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEHHHHHCCCHHHH
LQASNFIRTILHDSVLKVKSVEARNVSKIIEAIYLSSAQNKAIKIQNS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]