Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is yurO [H]

Identifier: 222150603

GI number: 222150603

Start: 370039

End: 371331

Strand: Direct

Name: yurO [H]

Synonym: MCCL_0353

Alternate gene names: 222150603

Gene position: 370039-371331 (Clockwise)

Preceding gene: 222150601

Following gene: 222150604

Centisome position: 17.6

GC content: 34.11

Gene sequence:

>1293_bases
ATGAAGAAAAAGACGTATTTATCGTGGGTAGCATTAATCGTATTAACACTTGTATTAGCGGCTTGTGGTAACTCAGGCTC
AGGCGGAGGTACTGCAAAAGATGGAGACAAAACAACAGTAAATGTATTCCAGTTCAAAGTAGAATTCAAACAACAGTTTG
AAGATATGGCCAAAAAATACATGGCTAAACATCCTGATGTTCAAATCAATATCGACACTGTTGGTGGTGGTAACGACTAC
GGTCAAGCTTTAAAAGCAAAAATCGCTTCAAAAAATGAACCAGATATTTTCAATATCGGTGGTCCTGAAGATTTAGAAGT
TCACAAAAATCGTTTAGCTGATTTATCAGATATGAAAGCTACTAAAGCAGTAATTAACGAAGATTTATTAGCACCTGTTC
AAAAAGATGGCAAATCTTACGGTATCCCAATGAACCAGGAAGGATATGGTTTAATCTACAACAAAGAAATCTTCGAAAAA
GCTGGTGTTAAAGCTGAAGATATTAAAACTTTAGATGATCTAGAAAAAGTTGCGGAAAAAATCGATGCTAAAAAATCGGA
GCTAAAACTTTCTGGCGTATTCGCTTTACCTGCAAAAGAGAAATGGGTGTTAAGTGACCATGCTTCAAGCATGTTCTTAG
CAACTGACTTTGATAATGATATTAAAAAAGCTTCTGAAGCAAAAACGTTAACATTCTCTAAAGCTGATCAATTAAAACAA
TACTTAGATATTCAAAACAAATATTCAAAACAACCTGTTGCATCTTTAGATTACTCTCAACAAGTTGAAGAATTATTCTC
AACTGGTAAAGTTGCAATGATTCAACAAGGTAACTGGGCATATCCTACAGTTGAAGGGGTAAACCCAGAACTTGCGAAAA
ATATTGGTTTAATCGCAGTTCCAACTGGTGATAAAGAAGTTACAATGCCAGTAGGGGTTGCAAACAACTGGGCAGTTAAC
AAAAAATCAGATGAAAAAGTTCAAAAAGCAGCAAAAGATTTCTTAGACTGGTTATATACTTCTGAAGAAGGTAAGAAAAT
CGTTGTAGAAGATTTCAAATTTATTCCTGCTTATAAAGACTATGATACTGATAAGATTGCTGATCCATTATCAAAAGAAA
TCTACAAATATTCACAAGAAGGTAAAACTTCTGCCTGGGTATTTAAAGGTTATCCAACTGGATACACTGATGACGCTTTA
GGTGCTTATTTACAAGATTATTTAACTGGTAAATTAACATTTGATGAAGCAATTAAAAAATCACAAGATGCTTGGGCAAA
AGCACGTAAATAA

Upstream 100 bases:

>100_bases
GTTTGCAAAAAAATATTGTACTGACAAGAATAATGTGATAATCTTTAGATGTATTAAATGAAAACGTTTTCTTAAAAAAC
TAAACAAAAGGAGATTGACG

Downstream 100 bases:

>100_bases
AAACTTAAGGGAGAACGCTTCGGTGGTTCTCCCTTTTTTAAACAAAGGAGTGAGCATATGAAGACGAAAAGTTTAGCTTT
CTGGTTATTTTTATTACCGG

Product: multiple sugar-binding transporter, binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MKKKTYLSWVALIVLTLVLAACGNSGSGGGTAKDGDKTTVNVFQFKVEFKQQFEDMAKKYMAKHPDVQINIDTVGGGNDY
GQALKAKIASKNEPDIFNIGGPEDLEVHKNRLADLSDMKATKAVINEDLLAPVQKDGKSYGIPMNQEGYGLIYNKEIFEK
AGVKAEDIKTLDDLEKVAEKIDAKKSELKLSGVFALPAKEKWVLSDHASSMFLATDFDNDIKKASEAKTLTFSKADQLKQ
YLDIQNKYSKQPVASLDYSQQVEELFSTGKVAMIQQGNWAYPTVEGVNPELAKNIGLIAVPTGDKEVTMPVGVANNWAVN
KKSDEKVQKAAKDFLDWLYTSEEGKKIVVEDFKFIPAYKDYDTDKIADPLSKEIYKYSQEGKTSAWVFKGYPTGYTDDAL
GAYLQDYLTGKLTFDEAIKKSQDAWAKARK

Sequences:

>Translated_430_residues
MKKKTYLSWVALIVLTLVLAACGNSGSGGGTAKDGDKTTVNVFQFKVEFKQQFEDMAKKYMAKHPDVQINIDTVGGGNDY
GQALKAKIASKNEPDIFNIGGPEDLEVHKNRLADLSDMKATKAVINEDLLAPVQKDGKSYGIPMNQEGYGLIYNKEIFEK
AGVKAEDIKTLDDLEKVAEKIDAKKSELKLSGVFALPAKEKWVLSDHASSMFLATDFDNDIKKASEAKTLTFSKADQLKQ
YLDIQNKYSKQPVASLDYSQQVEELFSTGKVAMIQQGNWAYPTVEGVNPELAKNIGLIAVPTGDKEVTMPVGVANNWAVN
KKSDEKVQKAAKDFLDWLYTSEEGKKIVVEDFKFIPAYKDYDTDKIADPLSKEIYKYSQEGKTSAWVFKGYPTGYTDDAL
GAYLQDYLTGKLTFDEAIKKSQDAWAKARK
>Mature_430_residues
MKKKTYLSWVALIVLTLVLAACGNSGSGGGTAKDGDKTTVNVFQFKVEFKQQFEDMAKKYMAKHPDVQINIDTVGGGNDY
GQALKAKIASKNEPDIFNIGGPEDLEVHKNRLADLSDMKATKAVINEDLLAPVQKDGKSYGIPMNQEGYGLIYNKEIFEK
AGVKAEDIKTLDDLEKVAEKIDAKKSELKLSGVFALPAKEKWVLSDHASSMFLATDFDNDIKKASEAKTLTFSKADQLKQ
YLDIQNKYSKQPVASLDYSQQVEELFSTGKVAMIQQGNWAYPTVEGVNPELAKNIGLIAVPTGDKEVTMPVGVANNWAVN
KKSDEKVQKAAKDFLDWLYTSEEGKKIVVEDFKFIPAYKDYDTDKIADPLSKEIYKYSQEGKTSAWVFKGYPTGYTDDAL
GAYLQDYLTGKLTFDEAIKKSQDAWAKARK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47702; Mature: 47702

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKTYLSWVALIVLTLVLAACGNSGSGGGTAKDGDKTTVNVFQFKVEFKQQFEDMAKKY
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHH
MAKHPDVQINIDTVGGGNDYGQALKAKIASKNEPDIFNIGGPEDLEVHKNRLADLSDMKA
HHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCHHHHHH
TKAVINEDLLAPVQKDGKSYGIPMNQEGYGLIYNKEIFEKAGVKAEDIKTLDDLEKVAEK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHH
IDAKKSELKLSGVFALPAKEKWVLSDHASSMFLATDFDNDIKKASEAKTLTFSKADQLKQ
HCCHHHHEEEEEEEECCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHEEEHHHHHHHHH
YLDIQNKYSKQPVASLDYSQQVEELFSTGKVAMIQQGNWAYPTVEGVNPELAKNIGLIAV
HHHHHHHHCCCCCHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHCCCEEEE
PTGDKEVTMPVGVANNWAVNKKSDEKVQKAAKDFLDWLYTSEEGKKIVVEDFKFIPAYKD
CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCEECCCCCC
YDTDKIADPLSKEIYKYSQEGKTSAWVFKGYPTGYTDDALGAYLQDYLTGKLTFDEAIKK
CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH
SQDAWAKARK
HHHHHHHCCC
>Mature Secondary Structure
MKKKTYLSWVALIVLTLVLAACGNSGSGGGTAKDGDKTTVNVFQFKVEFKQQFEDMAKKY
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHH
MAKHPDVQINIDTVGGGNDYGQALKAKIASKNEPDIFNIGGPEDLEVHKNRLADLSDMKA
HHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCHHHHHH
TKAVINEDLLAPVQKDGKSYGIPMNQEGYGLIYNKEIFEKAGVKAEDIKTLDDLEKVAEK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHH
IDAKKSELKLSGVFALPAKEKWVLSDHASSMFLATDFDNDIKKASEAKTLTFSKADQLKQ
HCCHHHHEEEEEEEECCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHEEEHHHHHHHHH
YLDIQNKYSKQPVASLDYSQQVEELFSTGKVAMIQQGNWAYPTVEGVNPELAKNIGLIAV
HHHHHHHHCCCCCHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHCCCEEEE
PTGDKEVTMPVGVANNWAVNKKSDEKVQKAAKDFLDWLYTSEEGKKIVVEDFKFIPAYKD
CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCEECCCCCC
YDTDKIADPLSKEIYKYSQEGKTSAWVFKGYPTGYTDDALGAYLQDYLTGKLTFDEAIKK
CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH
SQDAWAKARK
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]