| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is 222150585
Identifier: 222150585
GI number: 222150585
Start: 351474
End: 353162
Strand: Direct
Name: 222150585
Synonym: MCCL_0335
Alternate gene names: NA
Gene position: 351474-353162 (Clockwise)
Preceding gene: 222150583
Following gene: 222150586
Centisome position: 16.72
GC content: 28.0
Gene sequence:
>1689_bases ATGGAAAATATAAAGATAAACTATTACGACTTTAACAAAAATGTATTACCTGATATCAAGGATCCTGTATTAGACGGTTA TCCAATTGTATATATATTAAATAATGATTTATCACATCCTGAAGCATATATAGGCCAGACTGTACAAGTGAAGAGTAGAA TGAAAAATCATTTAACAAATAAAGATAGAAAGAAATTAGATAAAATGATTTTAATTGGACATGATAAATTCAATCAATCT GCAACCTATGATATAGAGACAAACCTCATTAATCATTTTATCGCTGATGAAAAATATAAGTTACAAAACAAGAGTCAGAC TGCTCAGCAAATGACACATAACTACTATGACAAGTCATATTATCATTCTGTAATTTTTGAAGACATATGGGATAAACTTA GGAAAGATGGCATTGTAAAACATACGATTGAAGATATTCGTAATCGAGATGTGTTTAAACTTTCACCGTTTAAAGAACTT TCTGAAGCTCAGATGGATTTAAAAACTAAAATTATTGAGTTTTGTAATAATCACATTAATGATGACAAAAAAGCTGTATT TTTAATTAAAGGTGATGCCGGTACAGGTAAAAGTGTAGTTTTAAGTTCCACATTTAATACGATTCAAGATTTATCAAAAA ACAAAGATTTTATATATTTAGAAAACACAATAGAAAACAATCTATTTAACTCTAAAAATTATTTATTAGTAAATCATAAT GAAATGTTAAAAACATATGAAACAATCTCTGAAAGCTTGCCTAATTTAAAGAAAAACAACTTTTTAAAACCAACTCCATT TATAAATAAGAGCAAATCAGGGAAGATAGAAGCAGATATAACTTTAGTAGATGAAGCTCATTTGTTATTAACACGACCAG ATAGTTTTAATTCATTTAAAGAAAATAATCAGTTAGAAGAAATCATCAAGCATAGTAAAGTAACCATAATCGTTTATGAT GAAAGGCAGTATTTAAAAATTAAATCTTCATGGTCAGAAAATATATTAAAGAAAATATTAAAAGGCACGAATAGTGAAGA GTTTGTACTAGATAGTCAATTTAGAATGCAAGCTGATCAAGATATGATTAATTGGTTAGATGCATTTGTAAATAAAGAGA TAAGAAAATTACCATATTCAAATAATGATGATTTTGAATTTAAGATTTTTGATAACGCAGCTCGAATGCACGAGGCAATT GTTGAGAAGAATGAAGAATTCAAATTATCTCGAGTTGTGTCAACATTTGATTACATACATAAAAAAGATGGAAATGATTA CTTTGTTGATGAGCCTGACTTTTCATTAGCCTGGAATAGAACTGATTATAAAAGTACTTGGGCTGAAGAACCTCAAACAA TTAGAGAGGTTGGATCGATCTATACAATTCAAGGTTTTGATTTAAATTATGTGGGAGTAATACTTGGACCTTCTATTGGA TATGATAAAAAAAATCATTGTTTAAAAATTGATGTAACTAAGTATAGAGATACAGAAGCTTTTAAACAGTCTTCCGAAGA GGTTAGAACAAAAAAAGAGCTCATAAGAATGAAAGAACAGATTATCCTAAATTCAATGAATGTGTTGTTAAAACGTGGTG TTAAAGGATTATATATTTATGCGAGTAATGAAGAACTTAGAAATATATTAATGAATGGAGGGCTTCCGCTTGAACCAAGA AATCATTGA
Upstream 100 bases:
>100_bases CATTAGCATATTACATTATTTGGATCAATTTCATTTTTTGAATAATGAAACAATATGTTTTTTGTTATAATTATAATAAC TAATTTTAAGGAGTACATAG
Downstream 100 bases:
>100_bases TTTAATTAATAAATTTAGGGAAGAAAGAAACTGGAATCAGTATCACAATCCAAAAGATCTATCTCTATCATTGAGTTTAG AAGCTGCTGAACTTCTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MENIKINYYDFNKNVLPDIKDPVLDGYPIVYILNNDLSHPEAYIGQTVQVKSRMKNHLTNKDRKKLDKMILIGHDKFNQS ATYDIETNLINHFIADEKYKLQNKSQTAQQMTHNYYDKSYYHSVIFEDIWDKLRKDGIVKHTIEDIRNRDVFKLSPFKEL SEAQMDLKTKIIEFCNNHINDDKKAVFLIKGDAGTGKSVVLSSTFNTIQDLSKNKDFIYLENTIENNLFNSKNYLLVNHN EMLKTYETISESLPNLKKNNFLKPTPFINKSKSGKIEADITLVDEAHLLLTRPDSFNSFKENNQLEEIIKHSKVTIIVYD ERQYLKIKSSWSENILKKILKGTNSEEFVLDSQFRMQADQDMINWLDAFVNKEIRKLPYSNNDDFEFKIFDNAARMHEAI VEKNEEFKLSRVVSTFDYIHKKDGNDYFVDEPDFSLAWNRTDYKSTWAEEPQTIREVGSIYTIQGFDLNYVGVILGPSIG YDKKNHCLKIDVTKYRDTEAFKQSSEEVRTKKELIRMKEQIILNSMNVLLKRGVKGLYIYASNEELRNILMNGGLPLEPR NH
Sequences:
>Translated_562_residues MENIKINYYDFNKNVLPDIKDPVLDGYPIVYILNNDLSHPEAYIGQTVQVKSRMKNHLTNKDRKKLDKMILIGHDKFNQS ATYDIETNLINHFIADEKYKLQNKSQTAQQMTHNYYDKSYYHSVIFEDIWDKLRKDGIVKHTIEDIRNRDVFKLSPFKEL SEAQMDLKTKIIEFCNNHINDDKKAVFLIKGDAGTGKSVVLSSTFNTIQDLSKNKDFIYLENTIENNLFNSKNYLLVNHN EMLKTYETISESLPNLKKNNFLKPTPFINKSKSGKIEADITLVDEAHLLLTRPDSFNSFKENNQLEEIIKHSKVTIIVYD ERQYLKIKSSWSENILKKILKGTNSEEFVLDSQFRMQADQDMINWLDAFVNKEIRKLPYSNNDDFEFKIFDNAARMHEAI VEKNEEFKLSRVVSTFDYIHKKDGNDYFVDEPDFSLAWNRTDYKSTWAEEPQTIREVGSIYTIQGFDLNYVGVILGPSIG YDKKNHCLKIDVTKYRDTEAFKQSSEEVRTKKELIRMKEQIILNSMNVLLKRGVKGLYIYASNEELRNILMNGGLPLEPR NH >Mature_562_residues MENIKINYYDFNKNVLPDIKDPVLDGYPIVYILNNDLSHPEAYIGQTVQVKSRMKNHLTNKDRKKLDKMILIGHDKFNQS ATYDIETNLINHFIADEKYKLQNKSQTAQQMTHNYYDKSYYHSVIFEDIWDKLRKDGIVKHTIEDIRNRDVFKLSPFKEL SEAQMDLKTKIIEFCNNHINDDKKAVFLIKGDAGTGKSVVLSSTFNTIQDLSKNKDFIYLENTIENNLFNSKNYLLVNHN EMLKTYETISESLPNLKKNNFLKPTPFINKSKSGKIEADITLVDEAHLLLTRPDSFNSFKENNQLEEIIKHSKVTIIVYD ERQYLKIKSSWSENILKKILKGTNSEEFVLDSQFRMQADQDMINWLDAFVNKEIRKLPYSNNDDFEFKIFDNAARMHEAI VEKNEEFKLSRVVSTFDYIHKKDGNDYFVDEPDFSLAWNRTDYKSTWAEEPQTIREVGSIYTIQGFDLNYVGVILGPSIG YDKKNHCLKIDVTKYRDTEAFKQSSEEVRTKKELIRMKEQIILNSMNVLLKRGVKGLYIYASNEELRNILMNGGLPLEPR NH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6325011, Length=424, Percent_Identity=40.5660377358491, Blast_Score=290, Evalue=3e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65822; Mature: 65822
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENIKINYYDFNKNVLPDIKDPVLDGYPIVYILNNDLSHPEAYIGQTVQVKSRMKNHLTN CCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHCCC KDRKKLDKMILIGHDKFNQSATYDIETNLINHFIADEKYKLQNKSQTAQQMTHNYYDKSY HHHHHHCCEEEEECCCCCCCCEEEEHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCHHH YHSVIFEDIWDKLRKDGIVKHTIEDIRNRDVFKLSPFKELSEAQMDLKTKIIEFCNNHIN HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCC DDKKAVFLIKGDAGTGKSVVLSSTFNTIQDLSKNKDFIYLENTIENNLFNSKNYLLVNHN CCCEEEEEEECCCCCCCEEEEECHHHHHHHHHCCCCEEEEECCHHCCCCCCCCEEEEECH EMLKTYETISESLPNLKKNNFLKPTPFINKSKSGKIEADITLVDEAHLLLTRPDSFNSFK HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEECCCCCCCHH ENNQLEEIIKHSKVTIIVYDERQYLKIKSSWSENILKKILKGTNSEEFVLDSQFRMQADQ CCCHHHHHHHHCCEEEEEECCCEEEEEHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHH DMINWLDAFVNKEIRKLPYSNNDDFEFKIFDNAARMHEAIVEKNEEFKLSRVVSTFDYIH HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHH KKDGNDYFVDEPDFSLAWNRTDYKSTWAEEPQTIREVGSIYTIQGFDLNYVGVILGPSIG HCCCCEEECCCCCCEEEECCCCCCHHHHCCHHHHHHHCCEEEEECCCCEEEEEEECCCCC YDKKNHCLKIDVTKYRDTEAFKQSSEEVRTKKELIRMKEQIILNSMNVLLKRGVKGLYIY CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE ASNEELRNILMNGGLPLEPRNH ECCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MENIKINYYDFNKNVLPDIKDPVLDGYPIVYILNNDLSHPEAYIGQTVQVKSRMKNHLTN CCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHCCC KDRKKLDKMILIGHDKFNQSATYDIETNLINHFIADEKYKLQNKSQTAQQMTHNYYDKSY HHHHHHCCEEEEECCCCCCCCEEEEHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCHHH YHSVIFEDIWDKLRKDGIVKHTIEDIRNRDVFKLSPFKELSEAQMDLKTKIIEFCNNHIN HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCC DDKKAVFLIKGDAGTGKSVVLSSTFNTIQDLSKNKDFIYLENTIENNLFNSKNYLLVNHN CCCEEEEEEECCCCCCCEEEEECHHHHHHHHHCCCCEEEEECCHHCCCCCCCCEEEEECH EMLKTYETISESLPNLKKNNFLKPTPFINKSKSGKIEADITLVDEAHLLLTRPDSFNSFK HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEECCCCCCCHH ENNQLEEIIKHSKVTIIVYDERQYLKIKSSWSENILKKILKGTNSEEFVLDSQFRMQADQ CCCHHHHHHHHCCEEEEEECCCEEEEEHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHH DMINWLDAFVNKEIRKLPYSNNDDFEFKIFDNAARMHEAIVEKNEEFKLSRVVSTFDYIH HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHH KKDGNDYFVDEPDFSLAWNRTDYKSTWAEEPQTIREVGSIYTIQGFDLNYVGVILGPSIG HCCCCEEECCCCCCEEEECCCCCCHHHHCCHHHHHHHCCEEEEECCCCEEEEEEECCCCC YDKKNHCLKIDVTKYRDTEAFKQSSEEVRTKKELIRMKEQIILNSMNVLLKRGVKGLYIY CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE ASNEELRNILMNGGLPLEPRNH ECCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA