| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is ybbP [H]
Identifier: 222150571
GI number: 222150571
Start: 334855
End: 335664
Strand: Direct
Name: ybbP [H]
Synonym: MCCL_0321
Alternate gene names: 222150571
Gene position: 334855-335664 (Clockwise)
Preceding gene: 222150569
Following gene: 222150572
Centisome position: 15.93
GC content: 38.77
Gene sequence:
>810_bases ATGCAATTGACGCATGTTTTTGATAACTTAAGTACAATAAAAGTTATCACAGGCATCATTGACCTCTTAATTGTATGGTA CGTTATCTACCTTATGATCAATGCAATCAAGGGTACGAAAGCAATACAATTATTAAAGGGTATCTTCTTTATTCTGATTG GTAAATTAATCAGTGACTCTTTAGGTTTAACAACCACTTCTAAGATATTTGATATGGTAATCGACTGGGGATTCCTGGCC ATTATCGTTATTTTTCAGCCAGAATTAAGAAGAGCGCTCGAGCAGTTAGGTCGAGGAAGTTTGTTTAAACGTAACGCCGC AAATTTAAAGGTGAGTCAGGCTAAGCTGACAGATGCGATGGTGAAATCCATTCAGTATATGGCAAAGCGTCGTATAGGTG CTTTAATTGTCTTTGAAAAGGAAACAGGGCTACAAGATTACATAGAAACAGGGATACCAATTTATGCAGATATCTCTACA GAATTAATGATTAATATCTTTATTCCGAATACGCCGCTCCATGATGGTGCGATGATCATTAGAGGCGATAAGATTGCAGT TGCTGCGAGTTACCTGCCGTTATCAGATAGCCCTAAGATACAAAAGAGTCTTGGAACGAGACATCGTGCAGCTGTTGGTA TATCAGAAGTATCTGATGCATTTACAGTTGTTGTCTCTGAGGAAACAGGCGATATATCTGTTACTTATAATGGTAGACTG CGCAAAGATGTATCTCTTGAAGTGCTGGAAGCACTGCTTACAGAACATTGGTTCGGCGCCCACTTATCTAAGAAAGGTGT GGTGAAATAA
Upstream 100 bases:
>100_bases TAATAATCGAATGAATATTGAAAAAATGTATTAAACTATACGAGGAATTGCGCTTTAACATGATATAATATAGGTTAGTA TGAATTATGGAGGAGATACA
Downstream 100 bases:
>100_bases TGTTAGAGAATAAATGGGGATTAAGACTCGTTGCATTTTTACTTGCACTCGGCATCTTTTTACAAGTGAATAATGTATTT GAAGTTATCAGCAATGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MQLTHVFDNLSTIKVITGIIDLLIVWYVIYLMINAIKGTKAIQLLKGIFFILIGKLISDSLGLTTTSKIFDMVIDWGFLA IIVIFQPELRRALEQLGRGSLFKRNAANLKVSQAKLTDAMVKSIQYMAKRRIGALIVFEKETGLQDYIETGIPIYADIST ELMINIFIPNTPLHDGAMIIRGDKIAVAASYLPLSDSPKIQKSLGTRHRAAVGISEVSDAFTVVVSEETGDISVTYNGRL RKDVSLEVLEALLTEHWFGAHLSKKGVVK
Sequences:
>Translated_269_residues MQLTHVFDNLSTIKVITGIIDLLIVWYVIYLMINAIKGTKAIQLLKGIFFILIGKLISDSLGLTTTSKIFDMVIDWGFLA IIVIFQPELRRALEQLGRGSLFKRNAANLKVSQAKLTDAMVKSIQYMAKRRIGALIVFEKETGLQDYIETGIPIYADIST ELMINIFIPNTPLHDGAMIIRGDKIAVAASYLPLSDSPKIQKSLGTRHRAAVGISEVSDAFTVVVSEETGDISVTYNGRL RKDVSLEVLEALLTEHWFGAHLSKKGVVK >Mature_269_residues MQLTHVFDNLSTIKVITGIIDLLIVWYVIYLMINAIKGTKAIQLLKGIFFILIGKLISDSLGLTTTSKIFDMVIDWGFLA IIVIFQPELRRALEQLGRGSLFKRNAANLKVSQAKLTDAMVKSIQYMAKRRIGALIVFEKETGLQDYIETGIPIYADIST ELMINIFIPNTPLHDGAMIIRGDKIAVAASYLPLSDSPKIQKSLGTRHRAAVGISEVSDAFTVVVSEETGDISVTYNGRL RKDVSLEVLEALLTEHWFGAHLSKKGVVK
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 29793; Mature: 29793
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTHVFDNLSTIKVITGIIDLLIVWYVIYLMINAIKGTKAIQLLKGIFFILIGKLISDS CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC LGLTTTSKIFDMVIDWGFLAIIVIFQPELRRALEQLGRGSLFKRNAANLKVSQAKLTDAM CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHH VKSIQYMAKRRIGALIVFEKETGLQDYIETGIPIYADISTELMINIFIPNTPLHDGAMII HHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCEEEECCEEEEEEEEECCCCCCCCEEEE RGDKIAVAASYLPLSDSPKIQKSLGTRHRAAVGISEVSDAFTVVVSEETGDISVTYNGRL ECCEEEEEEEECCCCCCCHHHHHHCCHHHHHHCHHHHCCEEEEEEECCCCCEEEEECCCC RKDVSLEVLEALLTEHWFGAHLSKKGVVK CCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQLTHVFDNLSTIKVITGIIDLLIVWYVIYLMINAIKGTKAIQLLKGIFFILIGKLISDS CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC LGLTTTSKIFDMVIDWGFLAIIVIFQPELRRALEQLGRGSLFKRNAANLKVSQAKLTDAM CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHH VKSIQYMAKRRIGALIVFEKETGLQDYIETGIPIYADISTELMINIFIPNTPLHDGAMII HHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCEEEECCEEEEEEEEECCCCCCCCEEEE RGDKIAVAASYLPLSDSPKIQKSLGTRHRAAVGISEVSDAFTVVVSEETGDISVTYNGRL ECCEEEEEEEECCCCCCCHHHHHHCCHHHHHHCHHHHCCEEEEEEECCCCCEEEEECCCC RKDVSLEVLEALLTEHWFGAHLSKKGVVK CCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]