| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is exp5 [H]
Identifier: 222150528
GI number: 222150528
Start: 280442
End: 282610
Strand: Direct
Name: exp5 [H]
Synonym: MCCL_0278
Alternate gene names: 222150528
Gene position: 280442-282610 (Clockwise)
Preceding gene: 222150526
Following gene: 222150529
Centisome position: 13.34
GC content: 39.19
Gene sequence:
>2169_bases GTGAAGAAATTATTAAGTTTTGAATTCTGGCAAAAGTTTGGAAAAGCATTGATGGTCGTTGTTGCAGTAATGCCAGCTGC TGGGTTGATGATCAGTATCGGGAAATCGATTCCATTAATCAGTCCGGATATGCAGATGTTGATTACAATTGGTAGTGTTA TAGAGAGTATAGGTTGGGCGATTATTGGAAACCTACATCTGCTCTTTGCATTAGCGATTGGAGGAAGCTGGGCGAAAGAG CGTGCTGGGGGTGCGTTTGCAGCAGGGATAGCCTTTATATTAATCAACCGTATTACAGGTGCTATCTTTGGTGTTAACAG TACAATGTTAGCAGATGACAAAGCATTTACTCACACGTTATTCGGCACTAAGATTATGGTAAAAGGGTTCTTTACGAGTG TGTTAGAGGCACCTGCATTAAACATGGGTGTATTCGTAGGGATTATCGCAGGATTTGTTGGTGCCAATGCATATAACAAA TATTATAACTACCGTAAGTTACCAGATGCATTATCATTCTTCAATGGTAAACGTTTCGTACCATTTGTCGTTATTTTATG GTCGACAATTGTAGCGATTGTACTATCAATCGTATGGCCTTATATACAAGCCGGTATTAACAACTTCGGTCTATGGATTG CAACATCTAAGGATACAGCGCCTATCTTAGCACCATTTTTATTTGGATTTTTAGAGCGTTTATTATTACCATTCGGATTA CATCATATGCTTACAATTCCAATTAACTATACGCAACTTGGTGGAACATATGAAATTCTTTCTGGTGCACAAGCAGGGAC GAAAGTGTATGGACAAGATCCTTTGTGGCTAGCATGGGCAACAGACTTAGTAAACTTAAATCATGCTGGAGATACTACGC AATATAATCACGTATTAAATACATTTACACCTGCACGTTTTAAAGTAGGACAAATGATTGGTTCAAGCGGTATTTTAATG GGACTTGCTTATGCGATGTACCGTAATGTTGACAAAGATAAGAAGCCAAAATATAAATCAATGTATTTATCAGCTGCAAT CGCAGTATTCTTAACTGGTGTAACAGAACCTTTAGAATTTATGTTCATGTTTGTAGCAGCACCACTTTATGCGGTGTATG CAGTTATTCAAGGTGCAGCATTCGCGATGGCAGACGTCATCAATCTACGCGTTCATTCATTTGGGACAATCGAATTATTA ACACGTACACCTCTTGCGCTTAAAGCGGGACTTGGTGGCGACTTGATTAACTTTGTTTTAACAACGATTGGGTTTGCAAT CGCAACATATTTCATTGCAAATCTCTTAATTAAAAAGTTCAATTTTGCAACACCGGGACGTAACGGAAATTATGAGATTG ATGGTGAAACTAACGCAACAGAAGTTGTAGCAGCAGATAAGCAAGTGATTCAAGTCATTCACTTATTAGGTGGGAAAGAG AATATTAAAGATGTCGACGCTTGTATGACAAGACTGCGAGTAAGTGTTAATGATAAAGCTAAAGTTGCGACAGAAACAGA ATGGAAGAAAGCTGGAGCAATGGGATTAATCGTTAAAGATAACGGTGTACAGGCTGTTTATGGTCCTAAAGCAGACGTAT TAAAATCAGATATCGAAGATTTATTACAGTCGGGCGCTGATATTCCAGAACCAGAAGAAACAATAGTTCAGCCAACTGTA CTGGACAACTCTGATGGTGCTGGGTTTACAGGTCATGCTCACCAACTACGTGCAGTTGCAGACGGAGAAGTTATCGATAT TACTTCTGTGAACGACCCTGTATTCTCACAGAAGATGATGGGTGAAGGCTATGCAGTAAAGCCGGAATCAGAAGAAGTTG TGTCACCGGTAGATGGAGAAATTATTAGTATCTTCCCGACGAAACATGCAATCGGTATTAGAACGAATGATGGGATAGAA GTCCTCGTGCATATGGGTATTGAAACAGTTCAAATGAAACAACCAGCTTCACGCGTTGTTGTCAATGACGGTCAGAAGGT AAAAGCCGGAGATACATTAGCTTATATGGATCTCGTAGCAGTAAGAGCAGAAGGTAAGGATACGACAATTATTATCGTAA TGACCAATAGCGATAAAGTTGATACATTACAATTAAATAAAACAGGAATCGTTCAAAAAGGTGAAACAGTTGGTACGATG ACAGTTTAA
Upstream 100 bases:
>100_bases CATTTAAAAACATATTAATATTACTATTTACAAAAATAAATTCAAATGATATATTGAATTCAACGAAACCGATTGCATAA AATAAAAGGAGTTGAATGTA
Downstream 100 bases:
>100_bases TCAAAAAGACAGTCTTTGGACTGTCTTTTCGTTATAATAGGGATAATTAATGATAAGGAGCGAATGCAGTGAAAGTATTA ACATTAAATACCCACAGCTG
Product: sugar-specific permease EIIA 1 domain
Products: NA
Alternate protein names: EII-Glc/EIII-Glc; EIICBA-Glc; Glucose permease IIC component; PTS system glucose-specific EIIC component; Glucose-specific phosphotransferase enzyme IIB component; PTS system glucose-specific EIIB component; Glucose-specific phosphotransferase enzyme IIA component; PTS system glucose-specific EIIA component [H]
Number of amino acids: Translated: 722; Mature: 722
Protein sequence:
>722_residues MKKLLSFEFWQKFGKALMVVVAVMPAAGLMISIGKSIPLISPDMQMLITIGSVIESIGWAIIGNLHLLFALAIGGSWAKE RAGGAFAAGIAFILINRITGAIFGVNSTMLADDKAFTHTLFGTKIMVKGFFTSVLEAPALNMGVFVGIIAGFVGANAYNK YYNYRKLPDALSFFNGKRFVPFVVILWSTIVAIVLSIVWPYIQAGINNFGLWIATSKDTAPILAPFLFGFLERLLLPFGL HHMLTIPINYTQLGGTYEILSGAQAGTKVYGQDPLWLAWATDLVNLNHAGDTTQYNHVLNTFTPARFKVGQMIGSSGILM GLAYAMYRNVDKDKKPKYKSMYLSAAIAVFLTGVTEPLEFMFMFVAAPLYAVYAVIQGAAFAMADVINLRVHSFGTIELL TRTPLALKAGLGGDLINFVLTTIGFAIATYFIANLLIKKFNFATPGRNGNYEIDGETNATEVVAADKQVIQVIHLLGGKE NIKDVDACMTRLRVSVNDKAKVATETEWKKAGAMGLIVKDNGVQAVYGPKADVLKSDIEDLLQSGADIPEPEETIVQPTV LDNSDGAGFTGHAHQLRAVADGEVIDITSVNDPVFSQKMMGEGYAVKPESEEVVSPVDGEIISIFPTKHAIGIRTNDGIE VLVHMGIETVQMKQPASRVVVNDGQKVKAGDTLAYMDLVAVRAEGKDTTIIIVMTNSDKVDTLQLNKTGIVQKGETVGTM TV
Sequences:
>Translated_722_residues MKKLLSFEFWQKFGKALMVVVAVMPAAGLMISIGKSIPLISPDMQMLITIGSVIESIGWAIIGNLHLLFALAIGGSWAKE RAGGAFAAGIAFILINRITGAIFGVNSTMLADDKAFTHTLFGTKIMVKGFFTSVLEAPALNMGVFVGIIAGFVGANAYNK YYNYRKLPDALSFFNGKRFVPFVVILWSTIVAIVLSIVWPYIQAGINNFGLWIATSKDTAPILAPFLFGFLERLLLPFGL HHMLTIPINYTQLGGTYEILSGAQAGTKVYGQDPLWLAWATDLVNLNHAGDTTQYNHVLNTFTPARFKVGQMIGSSGILM GLAYAMYRNVDKDKKPKYKSMYLSAAIAVFLTGVTEPLEFMFMFVAAPLYAVYAVIQGAAFAMADVINLRVHSFGTIELL TRTPLALKAGLGGDLINFVLTTIGFAIATYFIANLLIKKFNFATPGRNGNYEIDGETNATEVVAADKQVIQVIHLLGGKE NIKDVDACMTRLRVSVNDKAKVATETEWKKAGAMGLIVKDNGVQAVYGPKADVLKSDIEDLLQSGADIPEPEETIVQPTV LDNSDGAGFTGHAHQLRAVADGEVIDITSVNDPVFSQKMMGEGYAVKPESEEVVSPVDGEIISIFPTKHAIGIRTNDGIE VLVHMGIETVQMKQPASRVVVNDGQKVKAGDTLAYMDLVAVRAEGKDTTIIIVMTNSDKVDTLQLNKTGIVQKGETVGTM TV >Mature_722_residues MKKLLSFEFWQKFGKALMVVVAVMPAAGLMISIGKSIPLISPDMQMLITIGSVIESIGWAIIGNLHLLFALAIGGSWAKE RAGGAFAAGIAFILINRITGAIFGVNSTMLADDKAFTHTLFGTKIMVKGFFTSVLEAPALNMGVFVGIIAGFVGANAYNK YYNYRKLPDALSFFNGKRFVPFVVILWSTIVAIVLSIVWPYIQAGINNFGLWIATSKDTAPILAPFLFGFLERLLLPFGL HHMLTIPINYTQLGGTYEILSGAQAGTKVYGQDPLWLAWATDLVNLNHAGDTTQYNHVLNTFTPARFKVGQMIGSSGILM GLAYAMYRNVDKDKKPKYKSMYLSAAIAVFLTGVTEPLEFMFMFVAAPLYAVYAVIQGAAFAMADVINLRVHSFGTIELL TRTPLALKAGLGGDLINFVLTTIGFAIATYFIANLLIKKFNFATPGRNGNYEIDGETNATEVVAADKQVIQVIHLLGGKE NIKDVDACMTRLRVSVNDKAKVATETEWKKAGAMGLIVKDNGVQAVYGPKADVLKSDIEDLLQSGADIPEPEETIVQPTV LDNSDGAGFTGHAHQLRAVADGEVIDITSVNDPVFSQKMMGEGYAVKPESEEVVSPVDGEIISIFPTKHAIGIRTNDGIE VLVHMGIETVQMKQPASRVVVNDGQKVKAGDTLAYMDLVAVRAEGKDTTIIIVMTNSDKVDTLQLNKTGIVQKGETVGTM TV
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786894, Length=724, Percent_Identity=32.3204419889503, Blast_Score=286, Evalue=4e-78, Organism=Escherichia coli, GI1787343, Length=543, Percent_Identity=31.6758747697974, Blast_Score=236, Evalue=3e-63, Organism=Escherichia coli, GI1787908, Length=573, Percent_Identity=29.4938917975567, Blast_Score=209, Evalue=6e-55, Organism=Escherichia coli, GI1790159, Length=134, Percent_Identity=39.5522388059701, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1788757, Length=135, Percent_Identity=40, Blast_Score=104, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011300 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 78021; Mature: 78021
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLSFEFWQKFGKALMVVVAVMPAAGLMISIGKSIPLISPDMQMLITIGSVIESIGWA CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH IIGNLHLLFALAIGGSWAKERAGGAFAAGIAFILINRITGAIFGVNSTMLADDKAFTHTL HHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHH FGTKIMVKGFFTSVLEAPALNMGVFVGIIAGFVGANAYNKYYNYRKLPDALSFFNGKRFV HCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCCHH PFVVILWSTIVAIVLSIVWPYIQAGINNFGLWIATSKDTAPILAPFLFGFLERLLLPFGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC HHMLTIPINYTQLGGTYEILSGAQAGTKVYGQDPLWLAWATDLVNLNHAGDTTQYNHVLN CCEEEEEEEHEECCCHHHHHCCCCCCCEEECCCCEEEEEEHHHEECCCCCCCCHHHHHHH TFTPARFKVGQMIGSSGILMGLAYAMYRNVDKDKKPKYKSMYLSAAIAVFLTGVTEPLEF CCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH MFMFVAAPLYAVYAVIQGAAFAMADVINLRVHSFGTIELLTRTPLALKAGLGGDLINFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHEECCCCHHHHHHHH TTIGFAIATYFIANLLIKKFNFATPGRNGNYEIDGETNATEVVAADKQVIQVIHLLGGKE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEHHHHHHHHHHHHHCCCC NIKDVDACMTRLRVSVNDKAKVATETEWKKAGAMGLIVKDNGVQAVYGPKADVLKSDIED CCHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCEEEEEECCCEEEEECCCHHHHHHHHHH LLQSGADIPEPEETIVQPTVLDNSDGAGFTGHAHQLRAVADGEVIDITSVNDPVFSQKMM HHHCCCCCCCCHHHEECCEEEECCCCCCCCCCHHHEEEECCCCEEEEECCCCCHHHHHHC GEGYAVKPESEEVVSPVDGEIISIFPTKHAIGIRTNDGIEVLVHMGIETVQMKQPASRVV CCCEEECCCCHHHCCCCCCCEEEEEECCEEEEEECCCCCEEEEECCCHHEECCCCCCEEE VNDGQKVKAGDTLAYMDLVAVRAEGKDTTIIIVMTNSDKVDTLQLNKTGIVQKGETVGTM ECCCCEEECCCCHHHHHHHEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEE TV CC >Mature Secondary Structure MKKLLSFEFWQKFGKALMVVVAVMPAAGLMISIGKSIPLISPDMQMLITIGSVIESIGWA CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH IIGNLHLLFALAIGGSWAKERAGGAFAAGIAFILINRITGAIFGVNSTMLADDKAFTHTL HHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHH FGTKIMVKGFFTSVLEAPALNMGVFVGIIAGFVGANAYNKYYNYRKLPDALSFFNGKRFV HCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCCHH PFVVILWSTIVAIVLSIVWPYIQAGINNFGLWIATSKDTAPILAPFLFGFLERLLLPFGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC HHMLTIPINYTQLGGTYEILSGAQAGTKVYGQDPLWLAWATDLVNLNHAGDTTQYNHVLN CCEEEEEEEHEECCCHHHHHCCCCCCCEEECCCCEEEEEEHHHEECCCCCCCCHHHHHHH TFTPARFKVGQMIGSSGILMGLAYAMYRNVDKDKKPKYKSMYLSAAIAVFLTGVTEPLEF CCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH MFMFVAAPLYAVYAVIQGAAFAMADVINLRVHSFGTIELLTRTPLALKAGLGGDLINFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHEECCCCHHHHHHHH TTIGFAIATYFIANLLIKKFNFATPGRNGNYEIDGETNATEVVAADKQVIQVIHLLGGKE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEHHHHHHHHHHHHHCCCC NIKDVDACMTRLRVSVNDKAKVATETEWKKAGAMGLIVKDNGVQAVYGPKADVLKSDIED CCHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCEEEEEECCCEEEEECCCHHHHHHHHHH LLQSGADIPEPEETIVQPTVLDNSDGAGFTGHAHQLRAVADGEVIDITSVNDPVFSQKMM HHHCCCCCCCCHHHEECCEEEECCCCCCCCCCHHHEEEECCCCEEEEECCCCCHHHHHHC GEGYAVKPESEEVVSPVDGEIISIFPTKHAIGIRTNDGIEVLVHMGIETVQMKQPASRVV CCCEEECCCCHHHCCCCCCCEEEEEECCEEEEEECCCCCEEEEECCCHHEECCCCCCEEE VNDGQKVKAGDTLAYMDLVAVRAEGKDTTIIIVMTNSDKVDTLQLNKTGIVQKGETVGTM ECCCCEEECCCCHHHHHHHEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEE TV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11463916; 7934910 [H]