| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is pbuE [H]
Identifier: 222150523
GI number: 222150523
Start: 276761
End: 277903
Strand: Direct
Name: pbuE [H]
Synonym: MCCL_0273
Alternate gene names: 222150523
Gene position: 276761-277903 (Clockwise)
Preceding gene: 222150522
Following gene: 222150526
Centisome position: 13.16
GC content: 38.23
Gene sequence:
>1143_bases ATGAAGGTTAATTTGTTTTTACTTGCGATGATGGCATTCTTAGCAGGGTTAAATGAGCTTGTGCTAGCAGGTATTCTCCC GTTCGTGATGGATTACTTTAATATTAATACGCAAGAAGCGGGTTATTTAATAACCGTCTTCGCATTAATATTTGGTCTTG CAGGTCCTGTTCTGATGAGTGTAACGATGAATGTAAATCGTAAGACGCTATTATTAGTTTTCTTATCGATATTTATCGTT GGTAATTTAATGAGTGTGTTTGCGCAATTCTACTGGATGATGATGCTATCGCGCATCGTACTTGCTGCAAGTGTATCGAT GTTGATAGGCTTAGCATTATCGTTATCTGTTAAAGTAGTACCTGAGTATATGCAAGCGCGTGCGATTGGCATTATTATGA TGAGCATCAGTGGTTCTTTAGTACTGGGAACGCCCATTGGTATTTATATTGCAGAACTGACAGACTGGAAAGTGATATTT ATATTGATCAGTGTTTTATCGGCAATACTAATGCTGTTACTGATGAAGTATTTCCCGAAGAATATTCAAGTTGAACGTGT CTCTATGGCACGTGACTGGAAGTTTATATTGAAGAAAGAAATTTTATCTGTCCATTTGTTCAGTTTCTTATTCTTTGTAG GGCAGGGCATGTTTTTCGTTTATTTAACGCCGTACTTAATGGATAGAGGTCATAGCATCGCTGTTGTAGGCTTAATTTAT CTCGTGTTTGGTCTTGCGGGGATTCTCGGCAGTGGTATTGGTGGCTATATGACAGATAAGTTTGGGAGTACGAACTTACT TGTAGTGCAGTCGTTTTTATATGTATTTTTAATGCTGATGGTGAATTTTACAGCATTTTCTGCCGTGCTGGTATGTATTA ATATCGCGATATGGGCGATGACGGGGTGGATGGTAAATGCTCCGACGCAAACATATTTAATACAAGCAGCACCAAAGTTC TCGAGTATTAATCAAACTGTAAGTACATCATCAACGCAGTTCGGTATTTCTCTAGGTGCACTGTTAGGTGGCATCTGTAT TACCCAGACGAATTCATATCCTGCGCTCATTTATTATGGATGCTGTGTTCTTGTAATTGCATTTTTAGTAACGCTATATA TACGCAGACTTAATACGAAATAA
Upstream 100 bases:
>100_bases CTTTATAATATTTCTAAAGGTGGCTTTGTGCCGGTTTTCGTTTATACGATGATTACAGCGCCTTCCGATATGGAAGGCGC TGTTTATTTTGGAGGTTATA
Downstream 100 bases:
>100_bases GGAGTGGCAGGGGCCACTCCTTATTTTGTATGTATAGATGAATGTTTAAGGGATTTATGTGTTACCGCATGATGAATGAT GCTGACAACTTTAGAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MKVNLFLLAMMAFLAGLNELVLAGILPFVMDYFNINTQEAGYLITVFALIFGLAGPVLMSVTMNVNRKTLLLVFLSIFIV GNLMSVFAQFYWMMMLSRIVLAASVSMLIGLALSLSVKVVPEYMQARAIGIIMMSISGSLVLGTPIGIYIAELTDWKVIF ILISVLSAILMLLLMKYFPKNIQVERVSMARDWKFILKKEILSVHLFSFLFFVGQGMFFVYLTPYLMDRGHSIAVVGLIY LVFGLAGILGSGIGGYMTDKFGSTNLLVVQSFLYVFLMLMVNFTAFSAVLVCINIAIWAMTGWMVNAPTQTYLIQAAPKF SSINQTVSTSSTQFGISLGALLGGICITQTNSYPALIYYGCCVLVIAFLVTLYIRRLNTK
Sequences:
>Translated_380_residues MKVNLFLLAMMAFLAGLNELVLAGILPFVMDYFNINTQEAGYLITVFALIFGLAGPVLMSVTMNVNRKTLLLVFLSIFIV GNLMSVFAQFYWMMMLSRIVLAASVSMLIGLALSLSVKVVPEYMQARAIGIIMMSISGSLVLGTPIGIYIAELTDWKVIF ILISVLSAILMLLLMKYFPKNIQVERVSMARDWKFILKKEILSVHLFSFLFFVGQGMFFVYLTPYLMDRGHSIAVVGLIY LVFGLAGILGSGIGGYMTDKFGSTNLLVVQSFLYVFLMLMVNFTAFSAVLVCINIAIWAMTGWMVNAPTQTYLIQAAPKF SSINQTVSTSSTQFGISLGALLGGICITQTNSYPALIYYGCCVLVIAFLVTLYIRRLNTK >Mature_380_residues MKVNLFLLAMMAFLAGLNELVLAGILPFVMDYFNINTQEAGYLITVFALIFGLAGPVLMSVTMNVNRKTLLLVFLSIFIV GNLMSVFAQFYWMMMLSRIVLAASVSMLIGLALSLSVKVVPEYMQARAIGIIMMSISGSLVLGTPIGIYIAELTDWKVIF ILISVLSAILMLLLMKYFPKNIQVERVSMARDWKFILKKEILSVHLFSFLFFVGQGMFFVYLTPYLMDRGHSIAVVGLIY LVFGLAGILGSGIGGYMTDKFGSTNLLVVQSFLYVFLMLMVNFTAFSAVLVCINIAIWAMTGWMVNAPTQTYLIQAAPKF SSINQTVSTSSTQFGISLGALLGGICITQTNSYPALIYYGCCVLVIAFLVTLYIRRLNTK
Specific function: Involved in the efflux of purine ribonucleosides, such as guanosine, adenosine and inosine, as well as purine bases guanine, adenine and hypoxanthine, and purine base analogs 2,6- diaminopurine and 6-mercaptopurine. Therefore plays a role in maintaining t
COG id: COG2814
COG function: function code G; Arabinose efflux permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. DHA1 family. PbuE (TC 2.A.1.2.25) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787947, Length=336, Percent_Identity=25.5952380952381, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI145693198, Length=351, Percent_Identity=21.0826210826211, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1786595, Length=358, Percent_Identity=24.5810055865922, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1787808, Length=222, Percent_Identity=22.0720720720721, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42003; Mature: 42003
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVNLFLLAMMAFLAGLNELVLAGILPFVMDYFNINTQEAGYLITVFALIFGLAGPVLMS CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH VTMNVNRKTLLLVFLSIFIVGNLMSVFAQFYWMMMLSRIVLAASVSMLIGLALSLSVKVV HEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PEYMQARAIGIIMMSISGSLVLGTPIGIYIAELTDWKVIFILISVLSAILMLLLMKYFPK HHHHHHHHHHEEEEECCCCEEECCCHHEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCC NIQVERVSMARDWKFILKKEILSVHLFSFLFFVGQGMFFVYLTPYLMDRGHSIAVVGLIY CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHCCCCCHHHHHHHH LVFGLAGILGSGIGGYMTDKFGSTNLLVVQSFLYVFLMLMVNFTAFSAVLVCINIAIWAM HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGWMVNAPTQTYLIQAAPKFSSINQTVSTSSTQFGISLGALLGGICITQTNSYPALIYYG HCCEEECCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHCCHHEEECCCCCHHHHHH CCVLVIAFLVTLYIRRLNTK HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVNLFLLAMMAFLAGLNELVLAGILPFVMDYFNINTQEAGYLITVFALIFGLAGPVLMS CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH VTMNVNRKTLLLVFLSIFIVGNLMSVFAQFYWMMMLSRIVLAASVSMLIGLALSLSVKVV HEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PEYMQARAIGIIMMSISGSLVLGTPIGIYIAELTDWKVIFILISVLSAILMLLLMKYFPK HHHHHHHHHHEEEEECCCCEEECCCHHEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCC NIQVERVSMARDWKFILKKEILSVHLFSFLFFVGQGMFFVYLTPYLMDRGHSIAVVGLIY CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHCCCCCHHHHHHHH LVFGLAGILGSGIGGYMTDKFGSTNLLVVQSFLYVFLMLMVNFTAFSAVLVCINIAIWAM HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGWMVNAPTQTYLIQAAPKFSSINQTVSTSSTQFGISLGALLGGICITQTNSYPALIYYG HCCEEECCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHCCHHEEECCCCCHHHHHH CCVLVIAFLVTLYIRRLNTK HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA