| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is ydhK [H]
Identifier: 222150494
GI number: 222150494
Start: 245512
End: 246054
Strand: Direct
Name: ydhK [H]
Synonym: MCCL_0244
Alternate gene names: 222150494
Gene position: 245512-246054 (Clockwise)
Preceding gene: 222150493
Following gene: 222150496
Centisome position: 11.68
GC content: 33.33
Gene sequence:
>543_bases ATGATGAAAAAATTGAGCTTAATTATAGTAGCTTCAGGATTAGTATTATCAGCTTGTTCAACTGGTGAGGAAGAAGAAAA TTCTAAAGATCAAAAACAAGAAAAACATATGAATCATAAGAGTGAAAGTAAAGCCCCAGATAATATGAAAAGTACAGATG ACAGTAAATATAAAAAGGACGATAAAATAACAATTACAGCTGATCATATGCCTGGTACGAAAAATGCCAAAGGTACTGTG AAAGGTGCTTATAAAACGTATGCTTATGTCGTGAGTTACACACCTACAAATGGTGATGAAAAAGTTAATAATCACAAATG GGTCGTTAATGAGGAAGTTGCAGATGCCCCTGAAAATGGATTCAAGAAAGGTGATACAGTTAAATTAGAAGCTGACCATA TGCCTGGTATGAAAGGTGCAGAAGCTCAAATTGATGATGTAGAAAAAACAACCGTTTATATGGTGGATTATAAATCAACA GAAAACGATGAGATGGTTAAAAATCATAAATGGATGACAACTGACGAACTAAAATCTCGTTAA
Upstream 100 bases:
>100_bases TTTGCCTATGATAATCCAAGATAAAACATTCTTGAGCATGAAGATAATGGAATGATGGGACAAATAAAAGTAACAAAATA ATTTATAAGGAGAATTCAAT
Downstream 100 bases:
>100_bases TGTATATCATTTTAAAGCTTTAAAGTATTTAGTTAGTTATTCACAAATGCAATATGAATTCCCTTTGTTAAGTAGACAAG CAAATAAATAAAATTTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MMKKLSLIIVASGLVLSACSTGEEEENSKDQKQEKHMNHKSESKAPDNMKSTDDSKYKKDDKITITADHMPGTKNAKGTV KGAYKTYAYVVSYTPTNGDEKVNNHKWVVNEEVADAPENGFKKGDTVKLEADHMPGMKGAEAQIDDVEKTTVYMVDYKST ENDEMVKNHKWMTTDELKSR
Sequences:
>Translated_180_residues MMKKLSLIIVASGLVLSACSTGEEEENSKDQKQEKHMNHKSESKAPDNMKSTDDSKYKKDDKITITADHMPGTKNAKGTV KGAYKTYAYVVSYTPTNGDEKVNNHKWVVNEEVADAPENGFKKGDTVKLEADHMPGMKGAEAQIDDVEKTTVYMVDYKST ENDEMVKNHKWMTTDELKSR >Mature_180_residues MMKKLSLIIVASGLVLSACSTGEEEENSKDQKQEKHMNHKSESKAPDNMKSTDDSKYKKDDKITITADHMPGTKNAKGTV KGAYKTYAYVVSYTPTNGDEKVNNHKWVVNEEVADAPENGFKKGDTVKLEADHMPGMKGAEAQIDDVEKTTVYMVDYKST ENDEMVKNHKWMTTDELKSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011438 [H]
Pfam domain/function: PF07563 DUF1541 [H]
EC number: NA
Molecular weight: Translated: 20185; Mature: 20185
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKLSLIIVASGLVLSACSTGEEEENSKDQKQEKHMNHKSESKAPDNMKSTDDSKYKKD CCCCEEEEEEECCHHEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC DKITITADHMPGTKNAKGTVKGAYKTYAYVVSYTPTNGDEKVNNHKWVVNEEVADAPENG CEEEEEECCCCCCCCCCCEEEECEEEEEEEEEECCCCCCCCCCCCCEEEECHHHCCCCCC FKKGDTVKLEADHMPGMKGAEAQIDDVEKTTVYMVDYKSTENDEMVKNHKWMTTDELKSR CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCHHHHHCC >Mature Secondary Structure MMKKLSLIIVASGLVLSACSTGEEEENSKDQKQEKHMNHKSESKAPDNMKSTDDSKYKKD CCCCEEEEEEECCHHEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC DKITITADHMPGTKNAKGTVKGAYKTYAYVVSYTPTNGDEKVNNHKWVVNEEVADAPENG CEEEEEECCCCCCCCCCCEEEECEEEEEEEEEECCCCCCCCCCCCCEEEECHHHCCCCCC FKKGDTVKLEADHMPGMKGAEAQIDDVEKTTVYMVDYKSTENDEMVKNHKWMTTDELKSR CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]