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The map label for this gene is tnp [C]

Identifier: 222150487

GI number: 222150487

Start: 236934

End: 237893

Strand: Direct

Name: tnp [C]

Synonym: MCCL_0237

Alternate gene names: 222150487

Gene position: 236934-237893 (Clockwise)

Preceding gene: 222150486

Following gene: 222150493

Centisome position: 11.27

GC content: 36.46

Gene sequence:

>960_bases
ATGGCCTATAAACATCTTAACACGGATGAACTCACGTTCATAGAATCATATTATCATCAAAATCTTTCGGTAAAAGAAAT
CGCAAAGAGATTGAAACGATCAAGACAGACAATTTATAACGTAATAAATGCACTTAAGACAGGTATAACTGCACCGGAAT
ATTACCAAGAGTATAAGCAAAGAAAATCAAATTGTGGCAGACATAGAATAGTACTTCCAGAAAATCAGTCAGCTTATATT
CGAGAAAAAGTAGCCGATGGCTGGACACCTGACACCATTATTGGCAGAGGTGAACACCCGATTGATTGTTCTGTAAAAAC
TCTTTATAGAATGTTTAAGGAAAACGTCTTTTCGGTACAATCTTTACCTATGAAAGGTAAAAGGAAGCCAAATGGTCATT
GTGAAAAAAGAGGTAGACAAGCTTTCAAAAGACACATTTCTGAAAGAATAGAAGAGTTTCCTTTCTTCTTTCAAGAATTT
GGTCATCTTGAAGGTGACACTATCATTGGCCGTAATCATGGCAGTGCTGTCATAACCTTAGTAGAAAGAATCTCTAAGAT
GATTATCACTATACGACCTCAAGGCCGCAAGGCAGATGATATTGAAGATGCTCTTCACTCTATGTTTTCAGCTTTACCTC
CTCATATATTTAAATCGATTACTTTCGATTGTGGTAAGGAGTTCTCCAACTGGAAAACAATCTGTAACCGACAAGATATC
TCGATATTCTTTGCTGACCCCGGCACTCCATCGCAACGTGGATTGAATGAACATTCTAACGGGATACTTAGACGCAGTGG
ATTAGATAAAGAATTAGACTTTAATTCAGTCACTGATGATCATATTATTAGTGTTGCTCAAAATATTAATCATCGTCCCA
GAAAATCGCTGGGCTATAAAACACCATTGGAAGTATTTATGAGTTTCATCGAAGATGAGAAATTGTCTAGCTTATTTTGA

Upstream 100 bases:

>100_bases
ATACGTCGATTGTAAAATTAAGCTAGACAACTAAAAAAGCCTTCTGTGCTAAACTCAATATGTATTTCCGACCAAAGAAA
ACATAAGGAGTTAGTACAGA

Downstream 100 bases:

>100_bases
CAAACGAAATAGATAAAATATTTTCTATTGCCCGATAAATCATTCCATGATAAAAAACTAATTTCTTTCCTATCAATCAA
GACAAGATCAGGTACTTTCA

Product: transposase

Products: NA

Alternate protein names: Transposon TN4551 [H]

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MAYKHLNTDELTFIESYYHQNLSVKEIAKRLKRSRQTIYNVINALKTGITAPEYYQEYKQRKSNCGRHRIVLPENQSAYI
REKVADGWTPDTIIGRGEHPIDCSVKTLYRMFKENVFSVQSLPMKGKRKPNGHCEKRGRQAFKRHISERIEEFPFFFQEF
GHLEGDTIIGRNHGSAVITLVERISKMIITIRPQGRKADDIEDALHSMFSALPPHIFKSITFDCGKEFSNWKTICNRQDI
SIFFADPGTPSQRGLNEHSNGILRRSGLDKELDFNSVTDDHIISVAQNINHRPRKSLGYKTPLEVFMSFIEDEKLSSLF

Sequences:

>Translated_319_residues
MAYKHLNTDELTFIESYYHQNLSVKEIAKRLKRSRQTIYNVINALKTGITAPEYYQEYKQRKSNCGRHRIVLPENQSAYI
REKVADGWTPDTIIGRGEHPIDCSVKTLYRMFKENVFSVQSLPMKGKRKPNGHCEKRGRQAFKRHISERIEEFPFFFQEF
GHLEGDTIIGRNHGSAVITLVERISKMIITIRPQGRKADDIEDALHSMFSALPPHIFKSITFDCGKEFSNWKTICNRQDI
SIFFADPGTPSQRGLNEHSNGILRRSGLDKELDFNSVTDDHIISVAQNINHRPRKSLGYKTPLEVFMSFIEDEKLSSLF
>Mature_318_residues
AYKHLNTDELTFIESYYHQNLSVKEIAKRLKRSRQTIYNVINALKTGITAPEYYQEYKQRKSNCGRHRIVLPENQSAYIR
EKVADGWTPDTIIGRGEHPIDCSVKTLYRMFKENVFSVQSLPMKGKRKPNGHCEKRGRQAFKRHISERIEEFPFFFQEFG
HLEGDTIIGRNHGSAVITLVERISKMIITIRPQGRKADDIEDALHSMFSALPPHIFKSITFDCGKEFSNWKTICNRQDIS
IFFADPGTPSQRGLNEHSNGILRRSGLDKELDFNSVTDDHIISVAQNINHRPRKSLGYKTPLEVFMSFIEDEKLSSLF

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=331, Percent_Identity=26.8882175226586, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790736, Length=331, Percent_Identity=26.8882175226586, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787671, Length=331, Percent_Identity=26.8882175226586, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 36914; Mature: 36782

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKHLNTDELTFIESYYHQNLSVKEIAKRLKRSRQTIYNVINALKTGITAPEYYQEYKQ
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RKSNCGRHRIVLPENQSAYIREKVADGWTPDTIIGRGEHPIDCSVKTLYRMFKENVFSVQ
HHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHH
SLPMKGKRKPNGHCEKRGRQAFKRHISERIEEFPFFFQEFGHLEGDTIIGRNHGSAVITL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHH
VERISKMIITIRPQGRKADDIEDALHSMFSALPPHIFKSITFDCGKEFSNWKTICNRQDI
HHHHHHHEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
SIFFADPGTPSQRGLNEHSNGILRRSGLDKELDFNSVTDDHIISVAQNINHRPRKSLGYK
EEEEECCCCCHHCCCCHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCC
TPLEVFMSFIEDEKLSSLF
CHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AYKHLNTDELTFIESYYHQNLSVKEIAKRLKRSRQTIYNVINALKTGITAPEYYQEYKQ
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RKSNCGRHRIVLPENQSAYIREKVADGWTPDTIIGRGEHPIDCSVKTLYRMFKENVFSVQ
HHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHH
SLPMKGKRKPNGHCEKRGRQAFKRHISERIEEFPFFFQEFGHLEGDTIIGRNHGSAVITL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHH
VERISKMIITIRPQGRKADDIEDALHSMFSALPPHIFKSITFDCGKEFSNWKTICNRQDI
HHHHHHHEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
SIFFADPGTPSQRGLNEHSNGILRRSGLDKELDFNSVTDDHIISVAQNINHRPRKSLGYK
EEEEECCCCCHHCCCCHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCC
TPLEVFMSFIEDEKLSSLF
CHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2820936 [H]