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The map label for this gene is secY [H]

Identifier: 222150465

GI number: 222150465

Start: 212642

End: 213931

Strand: Direct

Name: secY [H]

Synonym: MCCL_0215

Alternate gene names: 222150465

Gene position: 212642-213931 (Clockwise)

Preceding gene: 222150464

Following gene: 222150466

Centisome position: 10.11

GC content: 36.51

Gene sequence:

>1290_bases
ATGTTCAGAACATTAATCAATTTCTTTAGAACTAAAGAAATTCGTAGCAAGATCATGTTTACACTCGCAATGTTAATTAT
CTTTAAAATCGGAACTTATATTCCGGTGCCTGGTGTTAATCCATCAGCATTTGAAAGTCAAACCAACAAAGGTATCACTG
ATTTGTTCAATACCTTTGGTGGTGGTGCACTTAAAAACTTCTCAATACTCGCGATGGGGATTATGCCTTATATCACTGCA
TCAATCGTAGTTCAGTTATTACAGATGGATGTTGTCCCGAAATTCACAGAATGGTCAAAGCAAGGTGAAGTGGGTCGTAA
AAAGCTAACGCAATTTACACGTTACTTCACAATTATATTGGCTTTTATTCAAGGATTTGGTATGAGCTATAGTTTCAACA
ATATGCTTGGGGGTCAGTTGATCACCAACTCAAACGTATGGAACTTCCTACTTATCGCTATAGTATTAACAGCTGGTACT
GCATTCTTAATGTGGTTAGGAGAACAAATCACAGTCCGTGGTGTAGGTAATGGTATCTCAATTATTATCTTCGGTGGTAT
ATTATCATCTATTCCATCATCTTTAACTCAGTATTATCAACAACGTTTTGTAGGTGCTGATGACACGACGATGGCGATTA
TAGAAGCAATCGGAATCTTAGTTGGTATGATTATCTTAACTGCAATTGCTGTATTCTTCTTACAAGCTATACGTAAGATT
CCTATTCAATATGCAAAAAGAACAACAACAAATCGTTTAGCACCACAAGCGACTTTCTTACCTTTAAAAGTAAATTCAGC
AGGTGTTATTCCAGTAATCTTTGCAATGGCATTCTTTATGCTACCAAAGACGTTACAGTTATTGTTCCCTAAAGCTGAGT
GGGCGAAGACGTTAGCAACACATTCTGATCCGGCACAACCAATTGGTATGGTTGTTTATGTGATCCTAATTATTTTATTT
GCTTATTTTTATGCGTTTGTACAGGTTAATCCTGAACAGATGGCAGATAATTTAAGAAAGCAAGGTAGTTACGTACCAGG
TATTCGTCCTGGTAAGAACACACTAAACTATATTACGAGAGTTCTTTATCGCTTAACTTTCGTTGGGTCAATTTTCTTAG
CTGCAATTGCAGTATTACCTTTACTCGTTTCTGATTTCTTAAATCTACCACAGGCACTACGCATTGGTGGTACAAGTTTA
TTAATCGTAATCGGGGTAGCGTTAGAAACAATTGCACAATTAAAAGCTCAACTTGGTCAGCGTGAATATAGAGGATTCAA
AAGACATTAA

Upstream 100 bases:

>100_bases
ACGGTGAATTATCTAAGAAATTAACAGTAAAAGCTCACAAATTCTCAGCTTCTGCTAAAGAAGCAATCGAAGGTAAGGGC
GGAACAACTGAGGTGATCTA

Downstream 100 bases:

>100_bases
TGTCTGGAGGGCATTTTATGAATATCATTTTAATGGGCTTACCTGGAGCAGGTAAAGGAACTCAAGCGAGTGAAATTATT
AAGAAATACCCGATTCCCCA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MFRTLINFFRTKEIRSKIMFTLAMLIIFKIGTYIPVPGVNPSAFESQTNKGITDLFNTFGGGALKNFSILAMGIMPYITA
SIVVQLLQMDVVPKFTEWSKQGEVGRKKLTQFTRYFTIILAFIQGFGMSYSFNNMLGGQLITNSNVWNFLLIAIVLTAGT
AFLMWLGEQITVRGVGNGISIIIFGGILSSIPSSLTQYYQQRFVGADDTTMAIIEAIGILVGMIILTAIAVFFLQAIRKI
PIQYAKRTTTNRLAPQATFLPLKVNSAGVIPVIFAMAFFMLPKTLQLLFPKAEWAKTLATHSDPAQPIGMVVYVILIILF
AYFYAFVQVNPEQMADNLRKQGSYVPGIRPGKNTLNYITRVLYRLTFVGSIFLAAIAVLPLLVSDFLNLPQALRIGGTSL
LIVIGVALETIAQLKAQLGQREYRGFKRH

Sequences:

>Translated_429_residues
MFRTLINFFRTKEIRSKIMFTLAMLIIFKIGTYIPVPGVNPSAFESQTNKGITDLFNTFGGGALKNFSILAMGIMPYITA
SIVVQLLQMDVVPKFTEWSKQGEVGRKKLTQFTRYFTIILAFIQGFGMSYSFNNMLGGQLITNSNVWNFLLIAIVLTAGT
AFLMWLGEQITVRGVGNGISIIIFGGILSSIPSSLTQYYQQRFVGADDTTMAIIEAIGILVGMIILTAIAVFFLQAIRKI
PIQYAKRTTTNRLAPQATFLPLKVNSAGVIPVIFAMAFFMLPKTLQLLFPKAEWAKTLATHSDPAQPIGMVVYVILIILF
AYFYAFVQVNPEQMADNLRKQGSYVPGIRPGKNTLNYITRVLYRLTFVGSIFLAAIAVLPLLVSDFLNLPQALRIGGTSL
LIVIGVALETIAQLKAQLGQREYRGFKRH
>Mature_429_residues
MFRTLINFFRTKEIRSKIMFTLAMLIIFKIGTYIPVPGVNPSAFESQTNKGITDLFNTFGGGALKNFSILAMGIMPYITA
SIVVQLLQMDVVPKFTEWSKQGEVGRKKLTQFTRYFTIILAFIQGFGMSYSFNNMLGGQLITNSNVWNFLLIAIVLTAGT
AFLMWLGEQITVRGVGNGISIIIFGGILSSIPSSLTQYYQQRFVGADDTTMAIIEAIGILVGMIILTAIAVFFLQAIRKI
PIQYAKRTTTNRLAPQATFLPLKVNSAGVIPVIFAMAFFMLPKTLQLLFPKAEWAKTLATHSDPAQPIGMVVYVILIILF
AYFYAFVQVNPEQMADNLRKQGSYVPGIRPGKNTLNYITRVLYRLTFVGSIFLAAIAVLPLLVSDFLNLPQALRIGGTSL
LIVIGVALETIAQLKAQLGQREYRGFKRH

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=420, Percent_Identity=40.4761904761905, Blast_Score=280, Evalue=2e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47592; Mature: 47592

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRTLINFFRTKEIRSKIMFTLAMLIIFKIGTYIPVPGVNPSAFESQTNKGITDLFNTFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHCC
GGALKNFSILAMGIMPYITASIVVQLLQMDVVPKFTEWSKQGEVGRKKLTQFTRYFTIIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
AFIQGFGMSYSFNNMLGGQLITNSNVWNFLLIAIVLTAGTAFLMWLGEQITVRGVGNGIS
HHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCE
IIIFGGILSSIPSSLTQYYQQRFVGADDTTMAIIEAIGILVGMIILTAIAVFFLQAIRKI
EEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIQYAKRTTTNRLAPQATFLPLKVNSAGVIPVIFAMAFFMLPKTLQLLFPKAEWAKTLAT
HHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
HSDPAQPIGMVVYVILIILFAYFYAFVQVNPEQMADNLRKQGSYVPGIRPGKNTLNYITR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
VLYRLTFVGSIFLAAIAVLPLLVSDFLNLPQALRIGGTSLLIVIGVALETIAQLKAQLGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
REYRGFKRH
HHHCCCCCC
>Mature Secondary Structure
MFRTLINFFRTKEIRSKIMFTLAMLIIFKIGTYIPVPGVNPSAFESQTNKGITDLFNTFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHCC
GGALKNFSILAMGIMPYITASIVVQLLQMDVVPKFTEWSKQGEVGRKKLTQFTRYFTIIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
AFIQGFGMSYSFNNMLGGQLITNSNVWNFLLIAIVLTAGTAFLMWLGEQITVRGVGNGIS
HHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCE
IIIFGGILSSIPSSLTQYYQQRFVGADDTTMAIIEAIGILVGMIILTAIAVFFLQAIRKI
EEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIQYAKRTTTNRLAPQATFLPLKVNSAGVIPVIFAMAFFMLPKTLQLLFPKAEWAKTLAT
HHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
HSDPAQPIGMVVYVILIILFAYFYAFVQVNPEQMADNLRKQGSYVPGIRPGKNTLNYITR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
VLYRLTFVGSIFLAAIAVLPLLVSDFLNLPQALRIGGTSLLIVIGVALETIAQLKAQLGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
REYRGFKRH
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1435726 [H]