| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is mtnE [H]
Identifier: 222150430
GI number: 222150430
Start: 188150
End: 189313
Strand: Direct
Name: mtnE [H]
Synonym: MCCL_0180
Alternate gene names: 222150430
Gene position: 188150-189313 (Clockwise)
Preceding gene: 222150429
Following gene: 222150433
Centisome position: 8.95
GC content: 38.4
Gene sequence:
>1164_bases ATGTCTGTGAGTTCTAAATTATTAAATTCAATACCTGAAAGTTATTTTGGTAAGACGATGGGCAGGAAGCTTGAAGTCGG GGATAAACCATTGATTAATACAGCAGTCGGTATCCCTGACCAACCAGTGGATCGTAAGGTGTTAAACGCATTACAAGATG CCATTGTTGACCCTGATAACCATAGATATGGTGTATTCCGTGGCAAGGAGACATTGAAGAAAGGGATCCAGAAGTTTTAT AAAGATATCTATGATGTTTCACTGGAGGATGATGAAGTTTGTATTCTTTATGGTACAAAAAATGGTCTTGTTCATATCCC TGCATGTGTCATTGAACCTGGCGAGGGAGTGTTACTCCCTAATCCGGGATATACCGATTACCTTGCTGGTGTTAAGCTTG CCAGAGGCTTACATTATGACTTACCATTACACCCTGAAGATCATTACTTACCTGACTTTGATAATATAGATAAAGCGCAG CTTAATAATACAAAGCTGATTTATCTTAACTATCCATCTAATCCAACTGGAGCAGTAGCGACCCAAGCATTTTTTGATGA TACAATTATGCGTTTTAAAGATACCGAAACAAAGATTGTCCATGACTTTGCCTATGCAGCTTTTGGATTTAATGGTAAGA ATCCAAGCATTCTTGCTTCACCTCATGGGAAAGAAGTCGCTGTAGAAATATATTCGTTATCTAAAGGGTTTAATATGTCG GGTGTACGTGTCGGGTTTGCTGTAGGGAATAAAGAGATTGTGAGTGCTCTGAACTATTTTCAGGATCATACTCAAGTTGG TATGTGGGGCGTTGTACAAGATGCGGCGATAGCAGCGCTTGAGCTGGGAGAGCCATATCTAGAATGTCAAAACAATATAT TTAAAGCACGACGCGATAAAGTGACAGCATATTTAAAGGAATATGAAATTCCGTTTGAGCCTATGAATGGTGGTATATTT TTATGGATAAAAGTGCCGGACGGTTTTGATGGGGAATCATATACAGACCATTTATTGAAGCAAGAATCAATTTTAGTAAC TCCAGGAATCCCTTTTGGGTCACGTGGTAAGAATTACATTAGAATCTCCCTTGCTATTGATGATGTGTTGATCAATGAAC TGCTCGAGCGCTTAAAAAATACAAAGAAGTTATATATAAAATAA
Upstream 100 bases:
>100_bases GTACTGTGCTAAATCCAGCAAGCATATGCTTGGTAGATAAGTGCCATATCGGCGTCATTGCTACTGAAGCAATGACGCTT TTCTATTTTTAAAGGAGCGA
Downstream 100 bases:
>100_bases GAACTTACAAAGCATTACTTTGTAAGTTCTTATTTTATAAGTATAGCGCACAAAGTGCGATAATCATTAGCGCCGTCATG ATAGAGAAGAGATCGAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MSVSSKLLNSIPESYFGKTMGRKLEVGDKPLINTAVGIPDQPVDRKVLNALQDAIVDPDNHRYGVFRGKETLKKGIQKFY KDIYDVSLEDDEVCILYGTKNGLVHIPACVIEPGEGVLLPNPGYTDYLAGVKLARGLHYDLPLHPEDHYLPDFDNIDKAQ LNNTKLIYLNYPSNPTGAVATQAFFDDTIMRFKDTETKIVHDFAYAAFGFNGKNPSILASPHGKEVAVEIYSLSKGFNMS GVRVGFAVGNKEIVSALNYFQDHTQVGMWGVVQDAAIAALELGEPYLECQNNIFKARRDKVTAYLKEYEIPFEPMNGGIF LWIKVPDGFDGESYTDHLLKQESILVTPGIPFGSRGKNYIRISLAIDDVLINELLERLKNTKKLYIK
Sequences:
>Translated_387_residues MSVSSKLLNSIPESYFGKTMGRKLEVGDKPLINTAVGIPDQPVDRKVLNALQDAIVDPDNHRYGVFRGKETLKKGIQKFY KDIYDVSLEDDEVCILYGTKNGLVHIPACVIEPGEGVLLPNPGYTDYLAGVKLARGLHYDLPLHPEDHYLPDFDNIDKAQ LNNTKLIYLNYPSNPTGAVATQAFFDDTIMRFKDTETKIVHDFAYAAFGFNGKNPSILASPHGKEVAVEIYSLSKGFNMS GVRVGFAVGNKEIVSALNYFQDHTQVGMWGVVQDAAIAALELGEPYLECQNNIFKARRDKVTAYLKEYEIPFEPMNGGIF LWIKVPDGFDGESYTDHLLKQESILVTPGIPFGSRGKNYIRISLAIDDVLINELLERLKNTKKLYIK >Mature_386_residues SVSSKLLNSIPESYFGKTMGRKLEVGDKPLINTAVGIPDQPVDRKVLNALQDAIVDPDNHRYGVFRGKETLKKGIQKFYK DIYDVSLEDDEVCILYGTKNGLVHIPACVIEPGEGVLLPNPGYTDYLAGVKLARGLHYDLPLHPEDHYLPDFDNIDKAQL NNTKLIYLNYPSNPTGAVATQAFFDDTIMRFKDTETKIVHDFAYAAFGFNGKNPSILASPHGKEVAVEIYSLSKGFNMSG VRVGFAVGNKEIVSALNYFQDHTQVGMWGVVQDAAIAALELGEPYLECQNNIFKARRDKVTAYLKEYEIPFEPMNGGIFL WIKVPDGFDGESYTDHLLKQESILVTPGIPFGSRGKNYIRISLAIDDVLINELLERLKNTKKLYIK
Specific function: Catalyzes the formation of methionine from 2-keto-4- methylthiobutyrate (KMTB) (Probable) [H]
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. MtnE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788722, Length=357, Percent_Identity=31.3725490196078, Blast_Score=191, Evalue=5e-50, Organism=Escherichia coli, GI1786816, Length=357, Percent_Identity=22.96918767507, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71994472, Length=392, Percent_Identity=22.7040816326531, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71994476, Length=392, Percent_Identity=22.7040816326531, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17567369, Length=289, Percent_Identity=24.5674740484429, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6322401, Length=389, Percent_Identity=21.5938303341902, Blast_Score=79, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: 2.6.1.- [C]
Molecular weight: Translated: 43219; Mature: 43088
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSSKLLNSIPESYFGKTMGRKLEVGDKPLINTAVGIPDQPVDRKVLNALQDAIVDPDN CCHHHHHHHHCCHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC HRYGVFRGKETLKKGIQKFYKDIYDVSLEDDEVCILYGTKNGLVHIPACVIEPGEGVLLP CEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECEEEEECCCCEEEC NPGYTDYLAGVKLARGLHYDLPLHPEDHYLPDFDNIDKAQLNNTKLIYLNYPSNPTGAVA CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCHHH TQAFFDDTIMRFKDTETKIVHDFAYAAFGFNGKNPSILASPHGKEVAVEIYSLSKGFNMS HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCC GVRVGFAVGNKEIVSALNYFQDHTQVGMWGVVQDAAIAALELGEPYLECQNNIFKARRDK CEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VTAYLKEYEIPFEPMNGGIFLWIKVPDGFDGESYTDHLLKQESILVTPGIPFGSRGKNYI HHHHHHHCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCEE RISLAIDDVLINELLERLKNTKKLYIK EEEEEHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure SVSSKLLNSIPESYFGKTMGRKLEVGDKPLINTAVGIPDQPVDRKVLNALQDAIVDPDN CHHHHHHHHCCHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC HRYGVFRGKETLKKGIQKFYKDIYDVSLEDDEVCILYGTKNGLVHIPACVIEPGEGVLLP CEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECEEEEECCCCEEEC NPGYTDYLAGVKLARGLHYDLPLHPEDHYLPDFDNIDKAQLNNTKLIYLNYPSNPTGAVA CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCHHH TQAFFDDTIMRFKDTETKIVHDFAYAAFGFNGKNPSILASPHGKEVAVEIYSLSKGFNMS HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCC GVRVGFAVGNKEIVSALNYFQDHTQVGMWGVVQDAAIAALELGEPYLECQNNIFKARRDK CEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VTAYLKEYEIPFEPMNGGIFLWIKVPDGFDGESYTDHLLKQESILVTPGIPFGSRGKNYI HHHHHHHCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCEE RISLAIDDVLINELLERLKNTKKLYIK EEEEEHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 12022921 [H]