| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150341
Identifier: 222150341
GI number: 222150341
Start: 94670
End: 95779
Strand: Direct
Name: 222150341
Synonym: MCCL_0091
Alternate gene names: NA
Gene position: 94670-95779 (Clockwise)
Preceding gene: 222150340
Following gene: 222150342
Centisome position: 4.5
GC content: 35.59
Gene sequence:
>1110_bases ATGGTCTTAATGAAAAATATATTGAAACGATCGGAATTACAGTGGTTTTTATACAGTTTGACTTTAATCATATGTATCGG AGCGATTGTATTCACACTTAATAATGACGCACTTTACAAGCAGACAATTGCAAAGGTGACTCATGTGGAAGTTATATCGA AAGAAAGCACAATTGATGTGAATCACCGCAAAGATATTGTATATAAGCAAGTGGTAGAAATGATAGGTACGAATCATACG CATAAGGGTGAAAGATTCATTGTTACCAATACATATACTAAAAGTGGTGCTTATGATGAGCAATATAAAAGAGGTCAGAA AGTGTTTATTAAAGCAGGAGATAAATCGCAAATTATAGGTGAGAAGAGGGATACAGTTTTAGTGAGTGCACTTTCTGTGT TTACGCTACTGCTTATTATTATCGTTGGTGAGAAAGGATTCTATTCACTTATAAGTTTAATTTTAAATTTCTGTATTACG TTATTTGTATTTAATTTCTATTTATCGCATAAACATATTCCGATGATACTAATAGCGAGTGTTGCAGTTGTATTATGTAC GATACTCACACTCACATTCGTTAATGGATTTACGAGGAAAACATGGATTGCGATTGTCAGCACACTCGCAGCCACTTTAG TAACATTACTCGTAGTGCAAAGTGTTATATATTTAACCTCAGCTGAAGGGATTCGCTATGAAACGATGTCTTACTTGACC ATACCACCAAAAAAAGTGTTTTTGACGACCATCCTTATTGGAACACTTGGAGCTGTTATGGATATAGCAATCACAATTAC GTCATCGTTACATGAGATAAAAGTAACGCAGCCTTTTTCGAATACGAAGTCATTACGTACATCGGGATATGAAATTGGAA AGGATATCATTGGTCCGATGACAAATATTTTATTATTTGCATATTTAAGTAGTGCAATACCGATTATTATATTGTATTTA GCAAATCATTCGCCGATATGGCAGACGTTTAGTTTACATTGGTCTCTAGAACTTGCTCGTGCAGTGTCGGGCAGTATCGG TATCGTACTTTCAATACCAATTACGGTATGGATTGCGAGCACGATGCTTGGAGGTGAGACGAAGCGATGA
Upstream 100 bases:
>100_bases AAGGGAGATTTTTTTGTGAAATATACTTATATAGCATCAGTTTTGATTTTTTGCGATATACTGTATTCTCAAACCATTAT TGATTTGAAAGGAATACCCT
Downstream 100 bases:
>100_bases AGACATTAACATTACTTATTATTATATTATTCGTGCTCATGGCAATTATCGGACGCAAAAATGGAATAAAAGCTTTTCTT GCAATATTTATGAATATATT
Product: hypothetical protein
Products: NA
Alternate protein names: Multitransmembrane Protein; YibE/F-Like Protein; Integral Membrane Protein; Lipoprotein; Yibe/F Family Protein; YibE/F-Like Family Protein; Conserved Multi-Transmembrane Protein; YibE/F Superfamily Transporter
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MVLMKNILKRSELQWFLYSLTLIICIGAIVFTLNNDALYKQTIAKVTHVEVISKESTIDVNHRKDIVYKQVVEMIGTNHT HKGERFIVTNTYTKSGAYDEQYKRGQKVFIKAGDKSQIIGEKRDTVLVSALSVFTLLLIIIVGEKGFYSLISLILNFCIT LFVFNFYLSHKHIPMILIASVAVVLCTILTLTFVNGFTRKTWIAIVSTLAATLVTLLVVQSVIYLTSAEGIRYETMSYLT IPPKKVFLTTILIGTLGAVMDIAITITSSLHEIKVTQPFSNTKSLRTSGYEIGKDIIGPMTNILLFAYLSSAIPIIILYL ANHSPIWQTFSLHWSLELARAVSGSIGIVLSIPITVWIASTMLGGETKR
Sequences:
>Translated_369_residues MVLMKNILKRSELQWFLYSLTLIICIGAIVFTLNNDALYKQTIAKVTHVEVISKESTIDVNHRKDIVYKQVVEMIGTNHT HKGERFIVTNTYTKSGAYDEQYKRGQKVFIKAGDKSQIIGEKRDTVLVSALSVFTLLLIIIVGEKGFYSLISLILNFCIT LFVFNFYLSHKHIPMILIASVAVVLCTILTLTFVNGFTRKTWIAIVSTLAATLVTLLVVQSVIYLTSAEGIRYETMSYLT IPPKKVFLTTILIGTLGAVMDIAITITSSLHEIKVTQPFSNTKSLRTSGYEIGKDIIGPMTNILLFAYLSSAIPIIILYL ANHSPIWQTFSLHWSLELARAVSGSIGIVLSIPITVWIASTMLGGETKR >Mature_369_residues MVLMKNILKRSELQWFLYSLTLIICIGAIVFTLNNDALYKQTIAKVTHVEVISKESTIDVNHRKDIVYKQVVEMIGTNHT HKGERFIVTNTYTKSGAYDEQYKRGQKVFIKAGDKSQIIGEKRDTVLVSALSVFTLLLIIIVGEKGFYSLISLILNFCIT LFVFNFYLSHKHIPMILIASVAVVLCTILTLTFVNGFTRKTWIAIVSTLAATLVTLLVVQSVIYLTSAEGIRYETMSYLT IPPKKVFLTTILIGTLGAVMDIAITITSSLHEIKVTQPFSNTKSLRTSGYEIGKDIIGPMTNILLFAYLSSAIPIIILYL ANHSPIWQTFSLHWSLELARAVSGSIGIVLSIPITVWIASTMLGGETKR
Specific function: Unknown
COG id: COG5438
COG function: function code S; Predicted multitransmembrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41119; Mature: 41119
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLMKNILKRSELQWFLYSLTLIICIGAIVFTLNNDALYKQTIAKVTHVEVISKESTIDV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCCCEEEC NHRKDIVYKQVVEMIGTNHTHKGERFIVTNTYTKSGAYDEQYKRGQKVFIKAGDKSQIIG CCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCEEEEEECCCHHHCC EKRDTVLVSALSVFTLLLIIIVGEKGFYSLISLILNFCITLFVFNFYLSHKHIPMILIAS CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VAVVLCTILTLTFVNGFTRKTWIAIVSTLAATLVTLLVVQSVIYLTSAEGIRYETMSYLT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE IPPKKVFLTTILIGTLGAVMDIAITITSSLHEIKVTQPFSNTKSLRTSGYEIGKDIIGPM CCCHHHHHHHHHHHHHHHHHHHHHHEECCHHEEEEECCCCCCHHHHHCCHHHHHHHHHHH TNILLFAYLSSAIPIIILYLANHSPIWQTFSLHWSLELARAVSGSIGIVLSIPITVWIAS HHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEHHHHHHHHCCCCEEEEEHHHHHHHHH TMLGGETKR HHCCCCCCC >Mature Secondary Structure MVLMKNILKRSELQWFLYSLTLIICIGAIVFTLNNDALYKQTIAKVTHVEVISKESTIDV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCCCEEEC NHRKDIVYKQVVEMIGTNHTHKGERFIVTNTYTKSGAYDEQYKRGQKVFIKAGDKSQIIG CCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCEEEEEECCCHHHCC EKRDTVLVSALSVFTLLLIIIVGEKGFYSLISLILNFCITLFVFNFYLSHKHIPMILIAS CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VAVVLCTILTLTFVNGFTRKTWIAIVSTLAATLVTLLVVQSVIYLTSAEGIRYETMSYLT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE IPPKKVFLTTILIGTLGAVMDIAITITSSLHEIKVTQPFSNTKSLRTSGYEIGKDIIGPM CCCHHHHHHHHHHHHHHHHHHHHHHEECCHHEEEEECCCCCCHHHHHCCHHHHHHHHHHH TNILLFAYLSSAIPIIILYLANHSPIWQTFSLHWSLELARAVSGSIGIVLSIPITVWIAS HHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEHHHHHHHHCCCCEEEEEHHHHHHHHH TMLGGETKR HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA