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The map label for this gene is ywcA [H]

Identifier: 222150334

GI number: 222150334

Start: 88152

End: 88487

Strand: Direct

Name: ywcA [H]

Synonym: MCCL_0084

Alternate gene names: 222150334

Gene position: 88152-88487 (Clockwise)

Preceding gene: 222150333

Following gene: 222150335

Centisome position: 4.19

GC content: 32.74

Gene sequence:

>336_bases
ATGAATACAACCGTAATTATTATATTTTTATTTTTTGTGAGTTTAACTCTAATTATTACTTACTTTGCTTCAAAAAGAAC
AAATTCTGCTGAAGATTTCTATACGGCAGGAGGAGGACTGACAGGATGGCAAAATGGTCTGGCTATTGCAGGAGATTATC
TTTCAGCTGCATCATTTTTAGGTATTGCTGGAGCTATTGCATTATGGGGTTTTGATGGGTTTTTTTATAGTATTGGATAT
TTAACAGCCTATTTAATTGTAATTATATATTGTTGCAGAACCTTTACGAAACTTAGGGAAGTATACATTAGCAGATATGA
TTGCTGCTCGATTTGA

Upstream 100 bases:

>100_bases
TTATGGTGTGGACGCATGTAAAACTCTATATGTCTAAAGCGAAACCCTTTGATATTCAATCAGAAGCAATCATCAATGAA
TGTCGAAAGGGGAATGATCA

Downstream 100 bases:

>100_bases
ACTGAAGAAAGTACGTGCAACGGCTGCAATATCATCGATTACGATTGTTATTTTCTATATGCTTGCACAGCTTGTAGGTG
CTGGTGCGCTGATTCAGCTC

Product: sodium-dependent symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MNTTVIIIFLFFVSLTLIITYFASKRTNSAEDFYTAGGGLTGWQNGLAIAGDYLSAASFLGIAGAIALWGFDGFFYSIGY
LTAYLIVIIYCCRTFTKLREVYISRYDCCSI

Sequences:

>Translated_111_residues
MNTTVIIIFLFFVSLTLIITYFASKRTNSAEDFYTAGGGLTGWQNGLAIAGDYLSAASFLGIAGAIALWGFDGFFYSIGY
LTAYLIVIIYCCRTFTKLREVYISRYDCCSI
>Mature_111_residues
MNTTVIIIFLFFVSLTLIITYFASKRTNSAEDFYTAGGGLTGWQNGLAIAGDYLSAASFLGIAGAIALWGFDGFFYSIGY
LTAYLIVIIYCCRTFTKLREVYISRYDCCSI

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=97, Percent_Identity=53.6082474226804, Blast_Score=100, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 12287; Mature: 12287

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTVIIIFLFFVSLTLIITYFASKRTNSAEDFYTAGGGLTGWQNGLAIAGDYLSAASFL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
GIAGAIALWGFDGFFYSIGYLTAYLIVIIYCCRTFTKLREVYISRYDCCSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTTVIIIFLFFVSLTLIITYFASKRTNSAEDFYTAGGGLTGWQNGLAIAGDYLSAASFL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
GIAGAIALWGFDGFFYSIGYLTAYLIVIIYCCRTFTKLREVYISRYDCCSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]