| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yhbD [H]
Identifier: 222150283
GI number: 222150283
Start: 38438
End: 39064
Strand: Direct
Name: yhbD [H]
Synonym: MCCL_0033
Alternate gene names: 222150283
Gene position: 38438-39064 (Clockwise)
Preceding gene: 222150282
Following gene: 222150284
Centisome position: 1.83
GC content: 30.94
Gene sequence:
>627_bases ATGGAGGATTTAATATCTAAAAAAGAGTTGCTGAAAGTATGTGATATTAGCTACGGGCAGTTGTATCGCTGGAAACGAAA GAAGCTGATTCCTGAAGATTGGTTTATAAGAAAATCTACTTATACAGGTCAAGAAGCATTCTTTCCTAGGAGTAAGATGA TTGAGCGCATAGAAATGATAAAAACTTTAAAAGATGATCATGCTTTAGATGATTTGTATAAAGTTTTTAAAGAAGATTAT GAGGTAATTGAGCAAAGAGATTATAATAGTAGTTTGTTTGAAGAACATTATTGGGAAATTGCAGACTCCATTTTTACGAA GCGTAATAGTGTTTCACATAATGAGGGTATGACATTGATGTTTATAGAGCTTGCTTTAAATTCAGGATATTTTTCAAAAG AAGAAGTACTAGAAAGTGCAGTAATATATCACCAAAACGAGATGAAAGATGTAAATTATTATTTTGTGCGAGCTATGGGT GTGTTCATGCTTATTTGCGCAAAAGAGATAGTAAAAATAAGTGATAACGCAAAGATTATTTACGAATTAGATGATACAAA AATTCAATTAGCGATACAACAAAAATTGAAAAGAGGTAGCCATGATGACAAGGAATCTAAATATTAA
Upstream 100 bases:
>100_bases TATAATTAGTCAGTATTATTCAAAAGAAAATATTATTAATGTTATTTAAATTAGTTAACAGTGTAACAATGTTATGTTAC ACTGTTTTTGAGGTGATGGT
Downstream 100 bases:
>100_bases TGCGATGACAACTATAGCTGCTGGAGAATATGATGAAATTAAAGTTACGGGTATAGGTTCAGTAACTGGAGATATTAAAG CTGACTTGATTAAAGTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MEDLISKKELLKVCDISYGQLYRWKRKKLIPEDWFIRKSTYTGQEAFFPRSKMIERIEMIKTLKDDHALDDLYKVFKEDY EVIEQRDYNSSLFEEHYWEIADSIFTKRNSVSHNEGMTLMFIELALNSGYFSKEEVLESAVIYHQNEMKDVNYYFVRAMG VFMLICAKEIVKISDNAKIIYELDDTKIQLAIQQKLKRGSHDDKESKY
Sequences:
>Translated_208_residues MEDLISKKELLKVCDISYGQLYRWKRKKLIPEDWFIRKSTYTGQEAFFPRSKMIERIEMIKTLKDDHALDDLYKVFKEDY EVIEQRDYNSSLFEEHYWEIADSIFTKRNSVSHNEGMTLMFIELALNSGYFSKEEVLESAVIYHQNEMKDVNYYFVRAMG VFMLICAKEIVKISDNAKIIYELDDTKIQLAIQQKLKRGSHDDKESKY >Mature_208_residues MEDLISKKELLKVCDISYGQLYRWKRKKLIPEDWFIRKSTYTGQEAFFPRSKMIERIEMIKTLKDDHALDDLYKVFKEDY EVIEQRDYNSSLFEEHYWEIADSIFTKRNSVSHNEGMTLMFIELALNSGYFSKEEVLESAVIYHQNEMKDVNYYFVRAMG VFMLICAKEIVKISDNAKIIYELDDTKIQLAIQQKLKRGSHDDKESKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24868; Mature: 24868
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDLISKKELLKVCDISYGQLYRWKRKKLIPEDWFIRKSTYTGQEAFFPRSKMIERIEMI CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHEEECCCCCCHHHHCCHHHHHHHHHHH KTLKDDHALDDLYKVFKEDYEVIEQRDYNSSLFEEHYWEIADSIFTKRNSVSHNEGMTLM HHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE FIELALNSGYFSKEEVLESAVIYHQNEMKDVNYYFVRAMGVFMLICAKEIVKISDNAKII EEEEHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE YELDDTKIQLAIQQKLKRGSHDDKESKY EEECCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MEDLISKKELLKVCDISYGQLYRWKRKKLIPEDWFIRKSTYTGQEAFFPRSKMIERIEMI CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHEEECCCCCCHHHHCCHHHHHHHHHHH KTLKDDHALDDLYKVFKEDYEVIEQRDYNSSLFEEHYWEIADSIFTKRNSVSHNEGMTLM HHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE FIELALNSGYFSKEEVLESAVIYHQNEMKDVNYYFVRAMGVFMLICAKEIVKISDNAKII EEEEHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE YELDDTKIQLAIQQKLKRGSHDDKESKY EEECCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9782504; 9384377 [H]