Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is yggX [C]

Identifier: 222111116

GI number: 222111116

Start: 2058992

End: 2059264

Strand: Direct

Name: yggX [C]

Synonym: Dtpsy_1924

Alternate gene names: 222111116

Gene position: 2058992-2059264 (Clockwise)

Preceding gene: 222111112

Following gene: 222111117

Centisome position: 54.23

GC content: 63.37

Gene sequence:

>273_bases
ATGGCACGTACCGTCCACTGCATCAAGCTCGGCAAGGAAGCCGAAGGCCTCGACTTTGCGCCCTACCCCGGCGATCTGGG
CAAACGCATCTATGACAACGTGAGCAAGCAAGCCTGGGCCGACTGGATCAAGCACCAGACCATGCTGGTCAACGAGAACC
GCCTGAACCTGGCCGACGCGCGCGCCCGCCAATACCTCGCCCGCCAGATGGAAAACCACTTCTTCGGCAGCGGCGCAGAC
GCTGCGGCGGGTTATGTGCCGCCCAGCGCGTAA

Upstream 100 bases:

>100_bases
CGATGCAAGGCATTCTGGAAGTCGCCCTTCAAAATCCAAACCAATAAGATTTCAGTTCGTTATTCCATTGACGTCTGAAG
TTTCAGCAAGGAATCGCTCC

Downstream 100 bases:

>100_bases
CGCAGTGCAGCGCTGCAAGAAGCGGTTTCGCTAAAGCCACTTCTTTGGCGCGGTGCAGATGCTGAGGCTGGCTGCGTCCC
GCCCGGCGCATAACGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MARTVHCIKLGKEAEGLDFAPYPGDLGKRIYDNVSKQAWADWIKHQTMLVNENRLNLADARARQYLARQMENHFFGSGAD
AAAGYVPPSA

Sequences:

>Translated_90_residues
MARTVHCIKLGKEAEGLDFAPYPGDLGKRIYDNVSKQAWADWIKHQTMLVNENRLNLADARARQYLARQMENHFFGSGAD
AAAGYVPPSA
>Mature_89_residues
ARTVHCIKLGKEAEGLDFAPYPGDLGKRIYDNVSKQAWADWIKHQTMLVNENRLNLADARARQYLARQMENHFFGSGADA
AAGYVPPSA

Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes

COG id: COG2924

COG function: function code CO; Fe-S cluster protector protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fe(2+)-trafficking protein family

Homologues:

Organism=Escherichia coli, GI1789332, Length=87, Percent_Identity=49.4252873563218, Blast_Score=99, Evalue=8e-23,

Paralogues:

None

Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): FETP_ACIET (B9MJP2)

Other databases:

- EMBL:   CP001392
- RefSeq:   YP_002553380.1
- ProteinModelPortal:   B9MJP2
- SMR:   B9MJP2
- GeneID:   7382042
- GenomeReviews:   CP001392_GR
- KEGG:   dia:Dtpsy_1924
- ProtClustDB:   PRK05408
- HAMAP:   MF_00686
- InterPro:   IPR007457
- PIRSF:   PIRSF029827
- ProDom:   PD029191

Pfam domain/function: PF04362 Iron_traffic; SSF111148 Fe_traffick_prot_YggX

EC number: NA

Molecular weight: Translated: 10035; Mature: 9904

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTVHCIKLGKEAEGLDFAPYPGDLGKRIYDNVSKQAWADWIKHQTMLVNENRLNLADA
CCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHH
RARQYLARQMENHFFGSGADAAAGYVPPSA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARTVHCIKLGKEAEGLDFAPYPGDLGKRIYDNVSKQAWADWIKHQTMLVNENRLNLADA
CCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHH
RARQYLARQMENHFFGSGADAAAGYVPPSA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA