| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222111058
Identifier: 222111058
GI number: 222111058
Start: 1988415
End: 1989332
Strand: Direct
Name: 222111058
Synonym: Dtpsy_1865
Alternate gene names: NA
Gene position: 1988415-1989332 (Clockwise)
Preceding gene: 222111057
Following gene: 222111059
Centisome position: 52.37
GC content: 60.35
Gene sequence:
>918_bases ATGTGTTCGACTACATCGAGCGGTTCTACAACCCGACTCGGCGGCACTCGACGATCGGCTACGTCAGCCCAGTACAGTTC GAACAAGCTCAAGGAGCTTAGGTCGGTGTCCAGAATTCCGGCAGCAGCCCATCTGCTGGTGCGTCAAGCGGCGATGTTCG GTCAGTTGATGGCTGGGGCTCGGCAGGCGCTGTGCGTCACTGGTCGGGACGCGCAGCGCCACGGCCAGGGGCGCGAAGCG CCTGGGCTTGTCTCAGTATCAACAACTTGCAGGAGCGGTGATATCAACAGATTTGATATCACTGGTGATCGCAAGTTGAC ATCAGATTTGATGGCTCCTATGATTTCTGCGTCATACCAGTTTGATTACAGATTGATATCATGTCCTACCCCCTCCGGCT CCGGCCCAACCTTGAAGCAGCAGCCCGCGAGCGGGCCGCAGCCATCGGCATCAGCTTCAATGCCTTCCTCTGCGTTTGTG TCGATGCCTACGTCAACGGCGCAGGCAAGCCCGCCCCGGAAGCCAGCGCTCCCCGGGCGCCCACTCAAAGCGAGCGACGA CGCGCAAGGCTCGATGAAGCCGAGTTCCAGGCCGTTGCAGATCAAGCCTTTGACGACAACGGGCAACCGATCGGATATGA CGAGAAGTGGAAGCTCATCTATCCAGACCCCGAGATGTGGCCCTGGCATGACCCGGAGCCCGCATGGGACAGTCGCCGAG ATGAAATCCTCGGCCAAGACGGGCACGACCCCAGCTTCGAACAGATCGAACGCCATACGCGCCAGCTTGAGGCCGAATAC TGGGCCACGCGGGAGCGTCCCGCCTATGCAGAGCCAGGACGCGAGCTGGCGAAAGGCAAGCGGCGCGGCAAGCGTGGAGG CTGACGCGCAGTATCAACAAATTGATGGAGGGCGTTGA
Upstream 100 bases:
>100_bases CCTTCAAGCTGCTGCGCCTGCTCAACGGCATGGAGCTGCCCGGCGAGTCCTGGCGTGGCTGGTGCTTTCATGGCGGGAAC CCGAGAGGAGGCGCGGGCTG
Downstream 100 bases:
>100_bases GGCGCAGGACGCGCCTTCATAAAAGCGCACAGCCCAGGTGGTGGAACACCCGGGCCGTGCTGACCAATTGAAAAACCCGC TGAGGTAATCGAAATGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MCSTTSSGSTTRLGGTRRSATSAQYSSNKLKELRSVSRIPAAAHLLVRQAAMFGQLMAGARQALCVTGRDAQRHGQGREA PGLVSVSTTCRSGDINRFDITGDRKLTSDLMAPMISASYQFDYRLISCPTPSGSGPTLKQQPASGPQPSASASMPSSAFV SMPTSTAQASPPRKPALPGRPLKASDDAQGSMKPSSRPLQIKPLTTTGNRSDMTRSGSSSIQTPRCGPGMTRSPHGTVAE MKSSAKTGTTPASNRSNAIRASLRPNTGPRGSVPPMQSQDASWRKASGAASVEADAQYQQIDGGR
Sequences:
>Translated_305_residues MCSTTSSGSTTRLGGTRRSATSAQYSSNKLKELRSVSRIPAAAHLLVRQAAMFGQLMAGARQALCVTGRDAQRHGQGREA PGLVSVSTTCRSGDINRFDITGDRKLTSDLMAPMISASYQFDYRLISCPTPSGSGPTLKQQPASGPQPSASASMPSSAFV SMPTSTAQASPPRKPALPGRPLKASDDAQGSMKPSSRPLQIKPLTTTGNRSDMTRSGSSSIQTPRCGPGMTRSPHGTVAE MKSSAKTGTTPASNRSNAIRASLRPNTGPRGSVPPMQSQDASWRKASGAASVEADAQYQQIDGGR >Mature_305_residues MCSTTSSGSTTRLGGTRRSATSAQYSSNKLKELRSVSRIPAAAHLLVRQAAMFGQLMAGARQALCVTGRDAQRHGQGREA PGLVSVSTTCRSGDINRFDITGDRKLTSDLMAPMISASYQFDYRLISCPTPSGSGPTLKQQPASGPQPSASASMPSSAFV SMPTSTAQASPPRKPALPGRPLKASDDAQGSMKPSSRPLQIKPLTTTGNRSDMTRSGSSSIQTPRCGPGMTRSPHGTVAE MKSSAKTGTTPASNRSNAIRASLRPNTGPRGSVPPMQSQDASWRKASGAASVEADAQYQQIDGGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31813; Mature: 31813
Theoretical pI: Translated: 11.56; Mature: 11.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSTTSSGSTTRLGGTRRSATSAQYSSNKLKELRSVSRIPAAAHLLVRQAAMFGQLMAGA CCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC RQALCVTGRDAQRHGQGREAPGLVSVSTTCRSGDINRFDITGDRKLTSDLMAPMISASYQ CCEEEEECCCHHHCCCCCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHCCEE FDYRLISCPTPSGSGPTLKQQPASGPQPSASASMPSSAFVSMPTSTAQASPPRKPALPGR ECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC PLKASDDAQGSMKPSSRPLQIKPLTTTGNRSDMTRSGSSSIQTPRCGPGMTRSPHGTVAE CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH MKSSAKTGTTPASNRSNAIRASLRPNTGPRGSVPPMQSQDASWRKASGAASVEADAQYQQ HHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHH IDGGR CCCCC >Mature Secondary Structure MCSTTSSGSTTRLGGTRRSATSAQYSSNKLKELRSVSRIPAAAHLLVRQAAMFGQLMAGA CCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC RQALCVTGRDAQRHGQGREAPGLVSVSTTCRSGDINRFDITGDRKLTSDLMAPMISASYQ CCEEEEECCCHHHCCCCCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHCCEE FDYRLISCPTPSGSGPTLKQQPASGPQPSASASMPSSAFVSMPTSTAQASPPRKPALPGR ECEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC PLKASDDAQGSMKPSSRPLQIKPLTTTGNRSDMTRSGSSSIQTPRCGPGMTRSPHGTVAE CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH MKSSAKTGTTPASNRSNAIRASLRPNTGPRGSVPPMQSQDASWRKASGAASVEADAQYQQ HHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHH IDGGR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA