| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is msrA [H]
Identifier: 222111032
GI number: 222111032
Start: 1957404
End: 1957949
Strand: Direct
Name: msrA [H]
Synonym: Dtpsy_1839
Alternate gene names: 222111032
Gene position: 1957404-1957949 (Clockwise)
Preceding gene: 222111027
Following gene: 222111033
Centisome position: 51.56
GC content: 66.3
Gene sequence:
>546_bases ATGTCCGATCTGCAGTCCATCACCCTCGGCGGCGGGTGCTTCTGGTGCACCGAAGCCGTGTTCGACCGCGTGCGCGGCGT GACCGACGTGCAAAGCGGCTATGCCAATGGCGACGTAGCCGAGCCCACCTACGAGCAGGTGTGCAGCGGCACGACCGGCC ACGCCGAGGTGGTGCGCGTGACCTTCGACCCCGCGCAGATCGGCGTGCGCGAGATCTTGGAGATCTTCTTCGCCACGCAC GACCCCACCACCCTCAACCGCCAGGGCAACGACGTGGGCACGCAGTACCGCAGCGCCATCTACTTCGCCGACCCCGCACA CCAGGACGTGGCCGAAGAGCTGTTGCGCCAGATGGGGCAGGACAAGCTCTTTGGCGCGCCCGTGGTGACCGAGGTGGCAC CCCTGGTGAACTACTGGCCCGCGGAGGACTACCACCAGGACTACTACCGCAACCACCCCAACCAGGGCTATTGCGCCTTC GTCGTGGGGCCAAAGGTGGAGAAGTTCCGCAAGACCTTCGCACGGCACCTCAAACCCGGCGCCTGA
Upstream 100 bases:
>100_bases CAACCCGCCTTGCCCCCGTCAACGCAAGGGCAGACTTCGGGACGGCGCCTTCGCTTCATTTCTATGATGAGGCTTTCATC CCTTCACGAGGCGCAATCCC
Downstream 100 bases:
>100_bases CCGCTGTGCGGCCCAGGTCGCCGCCAGCGGGTCCACCGCCTTCCCACAGCGGCGCATCCGCGCAGCCTTTTGGGAATCCC TGCGGGTTCCTGCGCTATCC
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSDLQSITLGGGCFWCTEAVFDRVRGVTDVQSGYANGDVAEPTYEQVCSGTTGHAEVVRVTFDPAQIGVREILEIFFATH DPTTLNRQGNDVGTQYRSAIYFADPAHQDVAEELLRQMGQDKLFGAPVVTEVAPLVNYWPAEDYHQDYYRNHPNQGYCAF VVGPKVEKFRKTFARHLKPGA
Sequences:
>Translated_181_residues MSDLQSITLGGGCFWCTEAVFDRVRGVTDVQSGYANGDVAEPTYEQVCSGTTGHAEVVRVTFDPAQIGVREILEIFFATH DPTTLNRQGNDVGTQYRSAIYFADPAHQDVAEELLRQMGQDKLFGAPVVTEVAPLVNYWPAEDYHQDYYRNHPNQGYCAF VVGPKVEKFRKTFARHLKPGA >Mature_180_residues SDLQSITLGGGCFWCTEAVFDRVRGVTDVQSGYANGDVAEPTYEQVCSGTTGHAEVVRVTFDPAQIGVREILEIFFATHD PTTLNRQGNDVGTQYRSAIYFADPAHQDVAEELLRQMGQDKLFGAPVVTEVAPLVNYWPAEDYHQDYYRNHPNQGYCAFV VGPKVEKFRKTFARHLKPGA
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=159, Percent_Identity=43.3962264150943, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI208609995, Length=159, Percent_Identity=43.3962264150943, Blast_Score=131, Evalue=3e-31, Organism=Homo sapiens, GI208609993, Length=112, Percent_Identity=43.75, Blast_Score=92, Evalue=2e-19, Organism=Escherichia coli, GI1790665, Length=146, Percent_Identity=43.1506849315069, Blast_Score=119, Evalue=8e-29, Organism=Caenorhabditis elegans, GI17533973, Length=149, Percent_Identity=32.2147651006711, Blast_Score=83, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6320881, Length=161, Percent_Identity=39.1304347826087, Blast_Score=115, Evalue=3e-27, Organism=Drosophila melanogaster, GI24664627, Length=162, Percent_Identity=30.8641975308642, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI45553131, Length=158, Percent_Identity=30.379746835443, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24664631, Length=162, Percent_Identity=30.2469135802469, Blast_Score=77, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 20166; Mature: 20034
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLQSITLGGGCFWCTEAVFDRVRGVTDVQSGYANGDVAEPTYEQVCSGTTGHAEVVRV CCCCCEEEECCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCEEEEE TFDPAQIGVREILEIFFATHDPTTLNRQGNDVGTQYRSAIYFADPAHQDVAEELLRQMGQ EECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHCC DKLFGAPVVTEVAPLVNYWPAEDYHQDYYRNHPNQGYCAFVVGPKVEKFRKTFARHLKPG CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCC A C >Mature Secondary Structure SDLQSITLGGGCFWCTEAVFDRVRGVTDVQSGYANGDVAEPTYEQVCSGTTGHAEVVRV CCCCEEEECCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCEEEEE TFDPAQIGVREILEIFFATHDPTTLNRQGNDVGTQYRSAIYFADPAHQDVAEELLRQMGQ EECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHCC DKLFGAPVVTEVAPLVNYWPAEDYHQDYYRNHPNQGYCAFVVGPKVEKFRKTFARHLKPG CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]