| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is yhhW [C]
Identifier: 222110978
GI number: 222110978
Start: 1902489
End: 1903190
Strand: Direct
Name: yhhW [C]
Synonym: Dtpsy_1785
Alternate gene names: 222110978
Gene position: 1902489-1903190 (Clockwise)
Preceding gene: 222110972
Following gene: 222110979
Centisome position: 50.11
GC content: 64.96
Gene sequence:
>702_bases ATGCTGACCCTTCGCAAATCGCAAGATCGCGGCCACGCAGACCACGGCTGGCTCAATTCGTACCACAGCTTCTCGTTCGC GGGCTACTACGACCCGCGCCACATGGGCTGGGGCAACCTGCGCGTCATCAACGAGGACCGCATCGCGCCGGGCACGGGCT TCGGCACCCATGGCCACCGCGACATGGAGATCATCAGCTACGTGCTGTCTGGCGAACTGGCGCACCAGGACAGCATGGGC AACGTCAAAGGCATTCCGCCCGGCGACGTGCAGCGCATGAGCGCCGGCACGGGCGTGATGCACAGCGAGTTCAACCACGC CGAGGGCCAGCAGACGCACTTTCTGCAGATCTGGATTGAGCCCAATGTGCGCGGCATCGCGCCGAGCTATGAGCAAAAGC GCTTTTCCGATGCCGACAAGCGCGGCCAGTTGCGTCGCGTGGCCTCGCCCGACGGCGCGCAAGGCTCGGTCACGATCCAT GCCGACGCCACGCTGTACGCGGGCCTGTTCGACGGTGCTGAGGCGGCGCAACTGCCCATTGCCGCAGGGCGCAAAGCCTA CGTTCACCTGATCCGCGGTACGCTGCAGGTCAACGGACAGCATCTGAGCGGGGGCGACGCGGCCCTGCTGGATAACGAAA GCAGCGTGACCCTGTCCGGGGGAAGCGATGCCGAAGTTCTGGTTTTTGATCTCGCCGCGTGA
Upstream 100 bases:
>100_bases TTCAATGAGTTTGAATGATGCCTTCAAGCCCGCTGTCCCTGCAAGGGCGCTGCGCCACCTACAGTTCTCTCCAACGCAAC GCATTTCCAGGAGCGACCCC
Downstream 100 bases:
>100_bases AGTCTGCCCATCCACTTCAACCCTAGGAGTTCCGCCATGTTTGCTACCCTGCAAAACCCTCTGGCCCTGGTGGGCCGCAT CCTCATCGCCCTGTTGTTCA
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MLTLRKSQDRGHADHGWLNSYHSFSFAGYYDPRHMGWGNLRVINEDRIAPGTGFGTHGHRDMEIISYVLSGELAHQDSMG NVKGIPPGDVQRMSAGTGVMHSEFNHAEGQQTHFLQIWIEPNVRGIAPSYEQKRFSDADKRGQLRRVASPDGAQGSVTIH ADATLYAGLFDGAEAAQLPIAAGRKAYVHLIRGTLQVNGQHLSGGDAALLDNESSVTLSGGSDAEVLVFDLAA
Sequences:
>Translated_233_residues MLTLRKSQDRGHADHGWLNSYHSFSFAGYYDPRHMGWGNLRVINEDRIAPGTGFGTHGHRDMEIISYVLSGELAHQDSMG NVKGIPPGDVQRMSAGTGVMHSEFNHAEGQQTHFLQIWIEPNVRGIAPSYEQKRFSDADKRGQLRRVASPDGAQGSVTIH ADATLYAGLFDGAEAAQLPIAAGRKAYVHLIRGTLQVNGQHLSGGDAALLDNESSVTLSGGSDAEVLVFDLAA >Mature_233_residues MLTLRKSQDRGHADHGWLNSYHSFSFAGYYDPRHMGWGNLRVINEDRIAPGTGFGTHGHRDMEIISYVLSGELAHQDSMG NVKGIPPGDVQRMSAGTGVMHSEFNHAEGQQTHFLQIWIEPNVRGIAPSYEQKRFSDADKRGQLRRVASPDGAQGSVTIH ADATLYAGLFDGAEAAQLPIAAGRKAYVHLIRGTLQVNGQHLSGGDAALLDNESSVTLSGGSDAEVLVFDLAA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=160, Percent_Identity=33.125, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI4505823, Length=160, Percent_Identity=33.125, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1789847, Length=231, Percent_Identity=48.9177489177489, Blast_Score=234, Evalue=4e-63, Organism=Escherichia coli, GI1789493, Length=236, Percent_Identity=30.5084745762712, Blast_Score=126, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 25175; Mature: 25175
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLRKSQDRGHADHGWLNSYHSFSFAGYYDPRHMGWGNLRVINEDRIAPGTGFGTHGHR CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCC DMEIISYVLSGELAHQDSMGNVKGIPPGDVQRMSAGTGVMHSEFNHAEGQQTHFLQIWIE HHHHHHHHHHCCHHCCCCCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCEEEEEEEEC PNVRGIAPSYEQKRFSDADKRGQLRRVASPDGAQGSVTIHADATLYAGLFDGAEAAQLPI CCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCEEEEEECCEEEEEECCCCCHHCCCC AAGRKAYVHLIRGTLQVNGQHLSGGDAALLDNESSVTLSGGSDAEVLVFDLAA CCCCCEEEEEEEEEEEECCEEECCCCEEEEECCCEEEEECCCCCEEEEEEECC >Mature Secondary Structure MLTLRKSQDRGHADHGWLNSYHSFSFAGYYDPRHMGWGNLRVINEDRIAPGTGFGTHGHR CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCC DMEIISYVLSGELAHQDSMGNVKGIPPGDVQRMSAGTGVMHSEFNHAEGQQTHFLQIWIE HHHHHHHHHHCCHHCCCCCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCEEEEEEEEC PNVRGIAPSYEQKRFSDADKRGQLRRVASPDGAQGSVTIHADATLYAGLFDGAEAAQLPI CCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCEEEEEECCEEEEEECCCCCHHCCCC AAGRKAYVHLIRGTLQVNGQHLSGGDAALLDNESSVTLSGGSDAEVLVFDLAA CCCCCEEEEEEEEEEEECCEEECCCCEEEEECCCEEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]