| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110958
Identifier: 222110958
GI number: 222110958
Start: 1876688
End: 1877455
Strand: Direct
Name: 222110958
Synonym: Dtpsy_1765
Alternate gene names: NA
Gene position: 1876688-1877455 (Clockwise)
Preceding gene: 222110957
Following gene: 222110959
Centisome position: 49.43
GC content: 74.87
Gene sequence:
>768_bases ATGGCGGCTTTTCTTTCCTCTTCCCTGAACGCGCTGCCCGGCGTCTGGCAGGGCGATGCCTGGGCGCACGCGCCGCAGCC GGCGGTGGCCACGGGCCATGCGCCGCTGGATGCGCAACTGCCCGGTGGGGGGTGGCCGCTGGGGTGCATGAGCGAGTTGC TGCTGCCTCCCCAGGCCCATCCCGAGTGGACCCTGGTGATGCCGGCCCTGGCCGCGCACCTGGCGCAAGGCCCGGGACGC GCGGTACTGGTCACGCCGCCGCTGGAGCCCTTCCTGCCGGCGCTGCAACCCCTGGGGCTTGCCGCCGACCGGCTGTGCTG CATTCACCCGCCCAGCCCGCGTGCGGACATGGCCGCGGCATGGGCCTGCGAACAGGCGCTGCGTTGCCGCGACGTGCGCG CCGTGCTGGCCTGGCTGCCGCAGGTGCCTGCCGCCGTGCTGCGGCGGCTGCAGCTGGCGGCCGCGCAGCACCGCCAACTG CTGTGGGTGATGCGCCCCGAGCGCTCGCGCGCGCAGGCATCGCCCGCGCCGCTGCGCCTGTGGCTGCAACCGCAGGGCGA GGAGCTGCACGTCCATGTCGTCAAGCGGCGCGGCCCGCCGCTGGCGCAGCCCGTGGCACTGCCCGCACGCACGCCGGTAC TGGCCGCGGCGCTGCAGGCACAGGCCCAATGGCGCCGCCAGGTGCAGGCGGCCGCCTGGGGCATGGGGGGCCGCACACCG CAGGAGGTGGAGGATGCATTGGCTTGCCTGGCACTTGCCACCCATTGA
Upstream 100 bases:
>100_bases GCACCCCCGGATCAGACGCTAAGCCCTGACGCCGGCTGGGTTGGAGCCGCCAACCGCCGATGATTACTGTATATTTGAAC AGTATTCATCGGCGGTTCGC
Downstream 100 bases:
>100_bases GGCCACGACCGGGCCCGCCACCGGGTCCGTGATCGGCCTGCCGCCTGCCGCGCAGGGCTGGTGGGCGCTGCGCTTCACGC CGCGCGTGGCCCTTGTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MAAFLSSSLNALPGVWQGDAWAHAPQPAVATGHAPLDAQLPGGGWPLGCMSELLLPPQAHPEWTLVMPALAAHLAQGPGR AVLVTPPLEPFLPALQPLGLAADRLCCIHPPSPRADMAAAWACEQALRCRDVRAVLAWLPQVPAAVLRRLQLAAAQHRQL LWVMRPERSRAQASPAPLRLWLQPQGEELHVHVVKRRGPPLAQPVALPARTPVLAAALQAQAQWRRQVQAAAWGMGGRTP QEVEDALACLALATH
Sequences:
>Translated_255_residues MAAFLSSSLNALPGVWQGDAWAHAPQPAVATGHAPLDAQLPGGGWPLGCMSELLLPPQAHPEWTLVMPALAAHLAQGPGR AVLVTPPLEPFLPALQPLGLAADRLCCIHPPSPRADMAAAWACEQALRCRDVRAVLAWLPQVPAAVLRRLQLAAAQHRQL LWVMRPERSRAQASPAPLRLWLQPQGEELHVHVVKRRGPPLAQPVALPARTPVLAAALQAQAQWRRQVQAAAWGMGGRTP QEVEDALACLALATH >Mature_254_residues AAFLSSSLNALPGVWQGDAWAHAPQPAVATGHAPLDAQLPGGGWPLGCMSELLLPPQAHPEWTLVMPALAAHLAQGPGRA VLVTPPLEPFLPALQPLGLAADRLCCIHPPSPRADMAAAWACEQALRCRDVRAVLAWLPQVPAAVLRRLQLAAAQHRQLL WVMRPERSRAQASPAPLRLWLQPQGEELHVHVVKRRGPPLAQPVALPARTPVLAAALQAQAQWRRQVQAAAWGMGGRTPQ EVEDALACLALATH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27303; Mature: 27172
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAFLSSSLNALPGVWQGDAWAHAPQPAVATGHAPLDAQLPGGGWPLGCMSELLLPPQAH CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC PEWTLVMPALAAHLAQGPGRAVLVTPPLEPFLPALQPLGLAADRLCCIHPPSPRADMAAA CCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHH WACEQALRCRDVRAVLAWLPQVPAAVLRRLQLAAAQHRQLLWVMRPERSRAQASPAPLRL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCCEEE WLQPQGEELHVHVVKRRGPPLAQPVALPARTPVLAAALQAQAQWRRQVQAAAWGMGGRTP EECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH QEVEDALACLALATH HHHHHHHHHHHHHCC >Mature Secondary Structure AAFLSSSLNALPGVWQGDAWAHAPQPAVATGHAPLDAQLPGGGWPLGCMSELLLPPQAH CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC PEWTLVMPALAAHLAQGPGRAVLVTPPLEPFLPALQPLGLAADRLCCIHPPSPRADMAAA CCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHH WACEQALRCRDVRAVLAWLPQVPAAVLRRLQLAAAQHRQLLWVMRPERSRAQASPAPLRL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCCEEE WLQPQGEELHVHVVKRRGPPLAQPVALPARTPVLAAALQAQAQWRRQVQAAAWGMGGRTP EECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH QEVEDALACLALATH HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA