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The map label for this gene is rhaS [C]

Identifier: 222110940

GI number: 222110940

Start: 1856003

End: 1857016

Strand: Direct

Name: rhaS [C]

Synonym: Dtpsy_1747

Alternate gene names: 222110940

Gene position: 1856003-1857016 (Clockwise)

Preceding gene: 222110938

Following gene: 222110945

Centisome position: 48.89

GC content: 69.92

Gene sequence:

>1014_bases
ATGTTTGCCGCGACAAAAACCTTTGCCTCGATCGTGAATCGCCGGCAGGCCGAGCCCCAGGCGGGGGAAATGACGGCCCT
GCTGCTGGACCGGCTGGCGCACGGTGGGGCTTTGAGCGGGCCCGAGCAGGCCGTCGGCGGTTCCGTGTTCAACGGCACGT
TGTCCCTGGCCGAACTGCGCGACGGGTTCTTCCTGCACCGCACGGACATCGCGTACCTGCGTGGCTTGACCAGCCGCTTC
CCGCTGACCAAGAGCGGGATCAAGATCGTGCTCAAGCTGCAGGGCGGCGGCAGGCTGCGCATCGGCCCCCTGGTCCTGCC
GGTGGAGGTGCCCCCGGGCGGGGGTGCCCGGGCGGCGGTGGTGGCACTGCGCGGGCCGGCGCCGTACGAGCACCGCTGCC
GCGCGCCGTCGCGCGAGCGCATGCTGGTTCTCACGCTGGCGCCGCACTGGCTGGACAAGGCGGGGCTGGGCCACCTGAAT
GCGCTGCCCCACCTGACCATGACGGCGTGGGCGCCTTCGCCCAGGGCGGTGTGCGTTGCCGAGCAGTTGTTGGCAGAGGG
CCAGGTGCAGTACGGGCCGCTCAGGGGGCTGCAGCAGGAGTGCCTGACGCTCGAACTGGTCATCGAGGCGCTGGCGCAGT
GGGTCGCGCCCGCCAATTCCGCCGCCGCATGCGAGGCAGCCGGATTGCGGCCAACCGCGTACCAGCGGGCATGCCATCTG
CGCGACTGGCTCGACAGCGGCGCCGCTGACTCCCTCACCATGGGCGCAATCGCGCGACACATGGGCTGCAACGCCAGCAC
CCTGCAAACGCAGTTCCGCCAGGCATTCGGCAAGCCCATCTTCGAACACTTGCGCGAAGGCCGCTTGCGCAGGGCGGCCG
ATGCCATCACGGCACAGGGCATCACCGTGGCGCAGGCGGCGGACTTGGCGGGCTACCGCAGCCCTGCGAATTTCTCCACC
GCCTTTCGCCGGCTCTACGGCTTTTCGCCCAAGAATCTCCGCGCGAAGCGGTGA

Upstream 100 bases:

>100_bases
CCTGGTAGGTGTGGCGAGACCGCTGAGATTGAGAATGGTTATCAACTGGCGTGTAGTATCGGGACAGCTCCGTTCTTCTT
CTTTTGCGCTGACAGGGAAT

Downstream 100 bases:

>100_bases
CTACCGCGCGGCGCACGCTTCCCGTATTTGAAGCGAAATTGCCCTCTAGCGCTTTCCTGAAACGCGCTAGTAGCTATTAA
TAGAGAAGCATCAGCCGAGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC-Family Transcriptional Regulator; Transcriptional Regulator Arac Family; AraC Family Transcription Regulator; Enterobactin-Dependent Positive Regulator; Transcriptional Regulator Protein

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MFAATKTFASIVNRRQAEPQAGEMTALLLDRLAHGGALSGPEQAVGGSVFNGTLSLAELRDGFFLHRTDIAYLRGLTSRF
PLTKSGIKIVLKLQGGGRLRIGPLVLPVEVPPGGGARAAVVALRGPAPYEHRCRAPSRERMLVLTLAPHWLDKAGLGHLN
ALPHLTMTAWAPSPRAVCVAEQLLAEGQVQYGPLRGLQQECLTLELVIEALAQWVAPANSAAACEAAGLRPTAYQRACHL
RDWLDSGAADSLTMGAIARHMGCNASTLQTQFRQAFGKPIFEHLREGRLRRAADAITAQGITVAQAADLAGYRSPANFST
AFRRLYGFSPKNLRAKR

Sequences:

>Translated_337_residues
MFAATKTFASIVNRRQAEPQAGEMTALLLDRLAHGGALSGPEQAVGGSVFNGTLSLAELRDGFFLHRTDIAYLRGLTSRF
PLTKSGIKIVLKLQGGGRLRIGPLVLPVEVPPGGGARAAVVALRGPAPYEHRCRAPSRERMLVLTLAPHWLDKAGLGHLN
ALPHLTMTAWAPSPRAVCVAEQLLAEGQVQYGPLRGLQQECLTLELVIEALAQWVAPANSAAACEAAGLRPTAYQRACHL
RDWLDSGAADSLTMGAIARHMGCNASTLQTQFRQAFGKPIFEHLREGRLRRAADAITAQGITVAQAADLAGYRSPANFST
AFRRLYGFSPKNLRAKR
>Mature_337_residues
MFAATKTFASIVNRRQAEPQAGEMTALLLDRLAHGGALSGPEQAVGGSVFNGTLSLAELRDGFFLHRTDIAYLRGLTSRF
PLTKSGIKIVLKLQGGGRLRIGPLVLPVEVPPGGGARAAVVALRGPAPYEHRCRAPSRERMLVLTLAPHWLDKAGLGHLN
ALPHLTMTAWAPSPRAVCVAEQLLAEGQVQYGPLRGLQQECLTLELVIEALAQWVAPANSAAACEAAGLRPTAYQRACHL
RDWLDSGAADSLTMGAIARHMGCNASTLQTQFRQAFGKPIFEHLREGRLRRAADAITAQGITVAQAADLAGYRSPANFST
AFRRLYGFSPKNLRAKR

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36195; Mature: 36195

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAATKTFASIVNRRQAEPQAGEMTALLLDRLAHGGALSGPEQAVGGSVFNGTLSLAELR
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHCCCCHHHHHH
DGFFLHRTDIAYLRGLTSRFPLTKSGIKIVLKLQGGGRLRIGPLVLPVEVPPGGGARAAV
CCEEEEEHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCEEEEEECCCCCCCCEEE
VALRGPAPYEHRCRAPSRERMLVLTLAPHWLDKAGLGHLNALPHLTMTAWAPSPRAVCVA
EEEECCCCHHHHCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHH
EQLLAEGQVQYGPLRGLQQECLTLELVIEALAQWVAPANSAAACEAAGLRPTAYQRACHL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHH
RDWLDSGAADSLTMGAIARHMGCNASTLQTQFRQAFGKPIFEHLREGRLRRAADAITAQG
HHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
ITVAQAADLAGYRSPANFSTAFRRLYGFSPKNLRAKR
CCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFAATKTFASIVNRRQAEPQAGEMTALLLDRLAHGGALSGPEQAVGGSVFNGTLSLAELR
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHCCCCHHHHHH
DGFFLHRTDIAYLRGLTSRFPLTKSGIKIVLKLQGGGRLRIGPLVLPVEVPPGGGARAAV
CCEEEEEHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCEEEEEECCCCCCCCEEE
VALRGPAPYEHRCRAPSRERMLVLTLAPHWLDKAGLGHLNALPHLTMTAWAPSPRAVCVA
EEEECCCCHHHHCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHH
EQLLAEGQVQYGPLRGLQQECLTLELVIEALAQWVAPANSAAACEAAGLRPTAYQRACHL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHH
RDWLDSGAADSLTMGAIARHMGCNASTLQTQFRQAFGKPIFEHLREGRLRRAADAITAQG
HHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
ITVAQAADLAGYRSPANFSTAFRRLYGFSPKNLRAKR
CCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA