| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is braC [H]
Identifier: 222110921
GI number: 222110921
Start: 1834169
End: 1835296
Strand: Direct
Name: braC [H]
Synonym: Dtpsy_1728
Alternate gene names: 222110921
Gene position: 1834169-1835296 (Clockwise)
Preceding gene: 222110920
Following gene: 222110923
Centisome position: 48.31
GC content: 60.28
Gene sequence:
>1128_bases ATGCAACTGAAGTTGAAAATGACCGTGGCTGCTGCGATCGCAGCGGTTGCCGGTGTGGCCGCTGCTCAAGAGGTGGTGAA GATTGGTCACGTGGCACCGGTCTCCGGCGCCCAGGCGCACTACGGCAAGGACAACGAAAACGGCGCTCGCATGGCCATTG AAGAGCTGAACGCCCAGGGCGTCACGATCGGTGGCAAGAAGGTGAAGCTGGAATTGGTGGCGGAGGACGATGCCGCTGAT CCCAAGCAAGGCACGGCGGCCGCACAGAAGTTGTGCGATGCCAAGGTCGCGGGGGTGGTCGGGCACCTGAACTCGGGCAC CACGATCCCTGCTTCCAAGGTCTACAACGACTGCGGGATCCCTCACGTCACTGGCGCCGCAACCAACCCCAACCTGACGC GCCCCGGCTACAAAACCACCTTCCGCATCATTGCGAACGACAACGCTCTGGGTGCTGGACTGGCGGCTTACGCGGCGGAA ACCCTGAAGCTGAAGACTGTGGCCATCGTGGATGACCGCACCGCTTATGGCCAGGGCGTTGCCAACGTGTTCAAGCGAGT GGCAGCCGAGAAAGGCATGAAGGTTGTGGACGAACAGTTCACCACGGACAAGGCGACGGACTTCATGGCCATTCTGACGG CCATCAAGGCCAAGAACCCCGATGCGATCTTCTTCGGCGGCATGGATCCTCAGGCGGGTCCCATGTTGCGCCAGATGGAG CAACTGGGTTTGGCCAACACGAAGTATTTCGGTGGGGATGGCGTATGCACCACGGAAATTGCCAAGCTGGCGGCAGGCGC CAAGACGCTGGCTAACGTGATTTGCGCAGAGGGTGGCGCATCCCTGGCCAAGATGCCTGGCGGCACGGCCTGGAAGGCCA AATACGACGCCAAGTACCCCAACCAGTTCCAGGTCTACAGCCCGTACACCTATGACGCGACCATGCTGCTGGTGGACGCT ATGAAGCGCGCCGGCTCCTGGGACCCGAAGGTGTATATCCCCGAGTTGCTCAAGTCCAACTACAAGGGCGTGACCGCGAA CATTGCGTTTGAACCCAATGGCGAAATGAAGAACCCGGCCATTACGCTGTACACCTACAAGGAAGGCAAGAAGACGCCGT TGAACTGA
Upstream 100 bases:
>100_bases CTCCTTGTGTTCCCTAGTGATGTGGAACATAAATTGCGATATGTTTCTCCGCGTTGGTTCACAACAATATTTCCAGCGCT TTTCTTAATTGGAGATCCAT
Downstream 100 bases:
>100_bases TCGACCTGTTCCGCCTCGCCTTGAGTGCGGATCTCGTAAAAAAGGGCTCCTTGGGGAGCCCTTTCTCTTGATATCAGCAA CCGTTCAGCGTCGGACCTGC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MQLKLKMTVAAAIAAVAGVAAAQEVVKIGHVAPVSGAQAHYGKDNENGARMAIEELNAQGVTIGGKKVKLELVAEDDAAD PKQGTAAAQKLCDAKVAGVVGHLNSGTTIPASKVYNDCGIPHVTGAATNPNLTRPGYKTTFRIIANDNALGAGLAAYAAE TLKLKTVAIVDDRTAYGQGVANVFKRVAAEKGMKVVDEQFTTDKATDFMAILTAIKAKNPDAIFFGGMDPQAGPMLRQME QLGLANTKYFGGDGVCTTEIAKLAAGAKTLANVICAEGGASLAKMPGGTAWKAKYDAKYPNQFQVYSPYTYDATMLLVDA MKRAGSWDPKVYIPELLKSNYKGVTANIAFEPNGEMKNPAITLYTYKEGKKTPLN
Sequences:
>Translated_375_residues MQLKLKMTVAAAIAAVAGVAAAQEVVKIGHVAPVSGAQAHYGKDNENGARMAIEELNAQGVTIGGKKVKLELVAEDDAAD PKQGTAAAQKLCDAKVAGVVGHLNSGTTIPASKVYNDCGIPHVTGAATNPNLTRPGYKTTFRIIANDNALGAGLAAYAAE TLKLKTVAIVDDRTAYGQGVANVFKRVAAEKGMKVVDEQFTTDKATDFMAILTAIKAKNPDAIFFGGMDPQAGPMLRQME QLGLANTKYFGGDGVCTTEIAKLAAGAKTLANVICAEGGASLAKMPGGTAWKAKYDAKYPNQFQVYSPYTYDATMLLVDA MKRAGSWDPKVYIPELLKSNYKGVTANIAFEPNGEMKNPAITLYTYKEGKKTPLN >Mature_375_residues MQLKLKMTVAAAIAAVAGVAAAQEVVKIGHVAPVSGAQAHYGKDNENGARMAIEELNAQGVTIGGKKVKLELVAEDDAAD PKQGTAAAQKLCDAKVAGVVGHLNSGTTIPASKVYNDCGIPHVTGAATNPNLTRPGYKTTFRIIANDNALGAGLAAYAAE TLKLKTVAIVDDRTAYGQGVANVFKRVAAEKGMKVVDEQFTTDKATDFMAILTAIKAKNPDAIFFGGMDPQAGPMLRQME QLGLANTKYFGGDGVCTTEIAKLAAGAKTLANVICAEGGASLAKMPGGTAWKAKYDAKYPNQFQVYSPYTYDATMLLVDA MKRAGSWDPKVYIPELLKSNYKGVTANIAFEPNGEMKNPAITLYTYKEGKKTPLN
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=379, Percent_Identity=32.1899736147757, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI48994941, Length=264, Percent_Identity=35.9848484848485, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39445; Mature: 39445
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLKLKMTVAAAIAAVAGVAAAQEVVKIGHVAPVSGAQAHYGKDNENGARMAIEELNAQG CEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC VTIGGKKVKLELVAEDDAADPKQGTAAAQKLCDAKVAGVVGHLNSGTTIPASKVYNDCGI EEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCC PHVTGAATNPNLTRPGYKTTFRIIANDNALGAGLAAYAAETLKLKTVAIVDDRTAYGQGV CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHEEEEEEEEEECCCHHHHHH ANVFKRVAAEKGMKVVDEQFTTDKATDFMAILTAIKAKNPDAIFFGGMDPQAGPMLRQME HHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHH QLGLANTKYFGGDGVCTTEIAKLAAGAKTLANVICAEGGASLAKMPGGTAWKAKYDAKYP HHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEEECCCCC NQFQVYSPYTYDATMLLVDAMKRAGSWDPKVYIPELLKSNYKGVTANIAFEPNGEMKNPA CCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHCCCCCCEEEEEEECCCCCCCCCE ITLYTYKEGKKTPLN EEEEEECCCCCCCCC >Mature Secondary Structure MQLKLKMTVAAAIAAVAGVAAAQEVVKIGHVAPVSGAQAHYGKDNENGARMAIEELNAQG CEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC VTIGGKKVKLELVAEDDAADPKQGTAAAQKLCDAKVAGVVGHLNSGTTIPASKVYNDCGI EEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCC PHVTGAATNPNLTRPGYKTTFRIIANDNALGAGLAAYAAETLKLKTVAIVDDRTAYGQGV CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHEEEEEEEEEECCCHHHHHH ANVFKRVAAEKGMKVVDEQFTTDKATDFMAILTAIKAKNPDAIFFGGMDPQAGPMLRQME HHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHH QLGLANTKYFGGDGVCTTEIAKLAAGAKTLANVICAEGGASLAKMPGGTAWKAKYDAKYP HHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEEECCCCC NQFQVYSPYTYDATMLLVDAMKRAGSWDPKVYIPELLKSNYKGVTANIAFEPNGEMKNPA CCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHCCCCCCEEEEEEECCCCCCCCCE ITLYTYKEGKKTPLN EEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]