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The map label for this gene is ybjZ [C]

Identifier: 222110879

GI number: 222110879

Start: 1787385

End: 1788584

Strand: Direct

Name: ybjZ [C]

Synonym: Dtpsy_1686

Alternate gene names: 222110879

Gene position: 1787385-1788584 (Clockwise)

Preceding gene: 222110878

Following gene: 222110880

Centisome position: 47.08

GC content: 66.25

Gene sequence:

>1200_bases
GTGATCAGCCTGGCAGGGCGCGACATTCTGCATGCCTGGGGGAAGTTCGTCTTCACCGGCATCGGCCTGGGCCTGCTGAT
CGGCGTGACGCTGACCATGGCGGGCGTCTACCGCGGCATGGTGGACGACGGTAAGGTGCTGCTGGACAACAGCGGCGCCG
ACCTGTGGGTGGTGCAGAAAGACACGCTGGGCCCCTACGCGGAATCCTCCAGCGTGCCCGACGACCTGTGGCGCGGCATC
CGCGCCATGCCGGGCGTGGCGCAGGCCGCCAACATCACCTACCTGACCATGCAGGTGGGCCACGGCGACAAGGATGTGCG
CTCCATGGTGGTGGGCATCACCGCGAGCGGCCCAGGCGCGCCCGGCTGGCCACCGCAGTTGGTGGCGGGGCGCCAGATCA
CGCGCGGCCATTACGAGGCCGTCGCCGACGTGGCGGCCGGCGTGCGTCTGGGCGATGTGCTGAAGATTCGGCGCAACCAC
TACACGGTGGTGGGCCTCACGCGGCGCATGGTCTCGTCCAGCGGCGACCCGATGGTGTTCATACCGTTGAAAGATGCGCA
GGAGGCGCAGTTCCTCAAGGACAACGACGCCATCCTCATGCAGCGCCGGCGCACCGAGGCCAACCCGGCCTTCAACCGCC
CCGGCGTTCCCGACCTGTTGGATGCGGTGGTGGCCTCGCAAACCAGCAACAGCTATGTGAATGCCGTGCTGGTGCGCATG
CAGCCGGGCTTCACATCTGAGGAGGTGGCCGAGCCCATCCGCCGCTGGAAGCGGCTCACGGTGTACGACCGGGCGCAGAT
GGAAGGCATCCTCGTGGGCAAGCTCATCGCCACATCGGCCAAGCAGATCGGCATGTTCCTGGTGATCCTGGCGCTGGTCA
GTGCGGCCATCGTGGCTTTTCTCATCTACACGCTGACGATGGACAAGATCCGCGAGATTGCCGTGCTCAAGCTCATCGGC
ACGCGCAACCGCACCATCGCCTGGATGATCCTGCAGCAGGCGCTGGTGCTCGGCGTGATCGGTTTCGTTGTCGGCAAGAT
CACGGCCACCTTTGCCGCGCCGCTGTTTCCCAAATACGTGCTGCTGGTGCCGTTCGATACGGTGGCGGGGTTCATCGCGG
TGCTGGCGATCTGCGTGCTCTCCAGCGTGGTGGCCATCCGCATGGCGCTGCGGGTCGATCCGGCCGAAGCGATAGGGTGA

Upstream 100 bases:

>100_bases
ACGGGCTGGCCGTGGGCGACTCCATCGTGGTGTACAGCGAGAGGGCGCTCACGGCGCGTAGCCGCGTGCACGTGGTTGAG
CGCATTGCCGGAGTGGCGCC

Downstream 100 bases:

>100_bases
GGACGCAGCAATGAGCAGGAAAGGGATCCACATCGAGCGCCTGACCAAGCGCTACGGCTCCGGCGACACGGCGTTCCTCG
CCCTCAAGGACGTGAACATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MISLAGRDILHAWGKFVFTGIGLGLLIGVTLTMAGVYRGMVDDGKVLLDNSGADLWVVQKDTLGPYAESSSVPDDLWRGI
RAMPGVAQAANITYLTMQVGHGDKDVRSMVVGITASGPGAPGWPPQLVAGRQITRGHYEAVADVAAGVRLGDVLKIRRNH
YTVVGLTRRMVSSSGDPMVFIPLKDAQEAQFLKDNDAILMQRRRTEANPAFNRPGVPDLLDAVVASQTSNSYVNAVLVRM
QPGFTSEEVAEPIRRWKRLTVYDRAQMEGILVGKLIATSAKQIGMFLVILALVSAAIVAFLIYTLTMDKIREIAVLKLIG
TRNRTIAWMILQQALVLGVIGFVVGKITATFAAPLFPKYVLLVPFDTVAGFIAVLAICVLSSVVAIRMALRVDPAEAIG

Sequences:

>Translated_399_residues
MISLAGRDILHAWGKFVFTGIGLGLLIGVTLTMAGVYRGMVDDGKVLLDNSGADLWVVQKDTLGPYAESSSVPDDLWRGI
RAMPGVAQAANITYLTMQVGHGDKDVRSMVVGITASGPGAPGWPPQLVAGRQITRGHYEAVADVAAGVRLGDVLKIRRNH
YTVVGLTRRMVSSSGDPMVFIPLKDAQEAQFLKDNDAILMQRRRTEANPAFNRPGVPDLLDAVVASQTSNSYVNAVLVRM
QPGFTSEEVAEPIRRWKRLTVYDRAQMEGILVGKLIATSAKQIGMFLVILALVSAAIVAFLIYTLTMDKIREIAVLKLIG
TRNRTIAWMILQQALVLGVIGFVVGKITATFAAPLFPKYVLLVPFDTVAGFIAVLAICVLSSVVAIRMALRVDPAEAIG
>Mature_399_residues
MISLAGRDILHAWGKFVFTGIGLGLLIGVTLTMAGVYRGMVDDGKVLLDNSGADLWVVQKDTLGPYAESSSVPDDLWRGI
RAMPGVAQAANITYLTMQVGHGDKDVRSMVVGITASGPGAPGWPPQLVAGRQITRGHYEAVADVAAGVRLGDVLKIRRNH
YTVVGLTRRMVSSSGDPMVFIPLKDAQEAQFLKDNDAILMQRRRTEANPAFNRPGVPDLLDAVVASQTSNSYVNAVLVRM
QPGFTSEEVAEPIRRWKRLTVYDRAQMEGILVGKLIATSAKQIGMFLVILALVSAAIVAFLIYTLTMDKIREIAVLKLIG
TRNRTIAWMILQQALVLGVIGFVVGKITATFAAPLFPKYVLLVPFDTVAGFIAVLAICVLSSVVAIRMALRVDPAEAIG

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 43009; Mature: 43009

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLAGRDILHAWGKFVFTGIGLGLLIGVTLTMAGVYRGMVDDGKVLLDNSGADLWVVQK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEE
DTLGPYAESSSVPDDLWRGIRAMPGVAQAANITYLTMQVGHGDKDVRSMVVGITASGPGA
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCEEEEEEEECCCCHHHHHEEEEEEECCCCC
PGWPPQLVAGRQITRGHYEAVADVAAGVRLGDVLKIRRNHYTVVGLTRRMVSSSGDPMVF
CCCCHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEHHHHHHHHCCCCCEEE
IPLKDAQEAQFLKDNDAILMQRRRTEANPAFNRPGVPDLLDAVVASQTSNSYVNAVLVRM
EECCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEE
QPGFTSEEVAEPIRRWKRLTVYDRAQMEGILVGKLIATSAKQIGMFLVILALVSAAIVAF
CCCCCHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIYTLTMDKIREIAVLKLIGTRNRTIAWMILQQALVLGVIGFVVGKITATFAAPLFPKYV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LLVPFDTVAGFIAVLAICVLSSVVAIRMALRVDPAEAIG
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure
MISLAGRDILHAWGKFVFTGIGLGLLIGVTLTMAGVYRGMVDDGKVLLDNSGADLWVVQK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEE
DTLGPYAESSSVPDDLWRGIRAMPGVAQAANITYLTMQVGHGDKDVRSMVVGITASGPGA
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCEEEEEEEECCCCHHHHHEEEEEEECCCCC
PGWPPQLVAGRQITRGHYEAVADVAAGVRLGDVLKIRRNHYTVVGLTRRMVSSSGDPMVF
CCCCHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEHHHHHHHHCCCCCEEE
IPLKDAQEAQFLKDNDAILMQRRRTEANPAFNRPGVPDLLDAVVASQTSNSYVNAVLVRM
EECCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEE
QPGFTSEEVAEPIRRWKRLTVYDRAQMEGILVGKLIATSAKQIGMFLVILALVSAAIVAF
CCCCCHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIYTLTMDKIREIAVLKLIGTRNRTIAWMILQQALVLGVIGFVVGKITATFAAPLFPKYV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LLVPFDTVAGFIAVLAICVLSSVVAIRMALRVDPAEAIG
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]