| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110864
Identifier: 222110864
GI number: 222110864
Start: 1769948
End: 1771090
Strand: Direct
Name: 222110864
Synonym: Dtpsy_1670
Alternate gene names: NA
Gene position: 1769948-1771090 (Clockwise)
Preceding gene: 222110863
Following gene: 222110865
Centisome position: 46.62
GC content: 72.44
Gene sequence:
>1143_bases ATGAGCAACTTCCAACTTGGTCTCATCATCGCCGGCGCGCTCGTGCTGATCGTCGTCGTCGCCTACAACGCCTGGACAAC CCACCGCAACGCGCCCAAGCGCCCGCGGCCGGCCGAGGCCGATCCCGCGCAGGAGCCCGTGGCGCGCCATGAGCCCGCCT TTGATGGCGCGGTGCTTACCGGCGCGGTGCTTACCGGCGCGGGGCTCACCGGCGCGGGGCTTGTCGGGAGCGGCGCCGAA GGCGAGGCCGAGCCCGGCTTTGACGGCCACGCCGTGGATCTGCGTGATGCGCTGGACCTGCCCGTGCCCACGGCCGAGCG CCGCGGCGGCCTGGATCCGCTGATCGACGCCATCGCCCCCATCGTGGCCGAGCAGCAGGTTTCGGGCGATGCGGCCCTGG CCGCGCTGCCGCCCACGCGCCGCGCGGGCAGCAAGCCGTTCGCGGTGGAGGGCTTCAACGACGCCGCGCAGCAGTGGGAA ACCCCCCAGCCCGGCCAGCGCTACCTGCAGTTCCAGGCGGGCGTGCAACTGGCCAATCGCCTGGGTGCGCTCAATGAGAT CGAGTTCTCCGAATTCGTCATGAAGGCCCAGGGCTTCGCCGACGCGATCAATGCCGCGCCCGACTTTCCCGACATGCTGC ACGAGGTGGCCCGCGCGCGCGAGCTGGACCAGTTCGCCAGCGAGCACGACGCGCAGCTCACCTTCGTGCTGCGGGCGCGC CACGCGGCCTGGAGCCCCGGCTACGTGCAGCAGAACGCCGCACGCCTGGGTCTCGTCGCCGGCGCCATTCCGGGCCGGCT GGTGCTGCCGGCGCAGGGGCCGGGCCTGCCGCCCGTGCTCACGCTGACCTACGACGCGCAGGCGGCCATGTCCGACGACC CCGAGCAGTCCGCCGTGCGCGACATCGTGCTGAGCCTGGACGTGGCCCAGGTCCACCGCTCGCAGCAGCCCTTTGCGCGC CTGCGCGAGGTGGCGGCCGCGCTCGGCGAGGCCATGGACGGCGTGCTGTGCGACCAGAACGGCACGCCGCTGCCCGCCAT GACCATGGAGCCCATCGCCGCCGATCTTGAGCAGCTGTACGACAAGCTGGACAGCCGCGAACTCTCGGCCGGCTCCGCGC TGGCGCGGCGCCTGTTCAGCTAG
Upstream 100 bases:
>100_bases CTGATCGGCGTCACCATGCAGGAGCAGGGCGTGTCGCGCATCGTGGCCGTGGACATGGAGTCCGCGCTGTCCATGGCCGA GGCCTGACCCCGTATTCACC
Downstream 100 bases:
>100_bases GAACCGGCATGATCGACCTGCGCGCCCACGATGTGCGCTCTTTCCTCCCGGCCCAGGACTTCGCGCTGTCCAAGGCGTTC TACGCGGCCCTGGGCTGCAC
Product: zipa ftsz-binding region
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MSNFQLGLIIAGALVLIVVVAYNAWTTHRNAPKRPRPAEADPAQEPVARHEPAFDGAVLTGAVLTGAGLTGAGLVGSGAE GEAEPGFDGHAVDLRDALDLPVPTAERRGGLDPLIDAIAPIVAEQQVSGDAALAALPPTRRAGSKPFAVEGFNDAAQQWE TPQPGQRYLQFQAGVQLANRLGALNEIEFSEFVMKAQGFADAINAAPDFPDMLHEVARARELDQFASEHDAQLTFVLRAR HAAWSPGYVQQNAARLGLVAGAIPGRLVLPAQGPGLPPVLTLTYDAQAAMSDDPEQSAVRDIVLSLDVAQVHRSQQPFAR LREVAAALGEAMDGVLCDQNGTPLPAMTMEPIAADLEQLYDKLDSRELSAGSALARRLFS
Sequences:
>Translated_380_residues MSNFQLGLIIAGALVLIVVVAYNAWTTHRNAPKRPRPAEADPAQEPVARHEPAFDGAVLTGAVLTGAGLTGAGLVGSGAE GEAEPGFDGHAVDLRDALDLPVPTAERRGGLDPLIDAIAPIVAEQQVSGDAALAALPPTRRAGSKPFAVEGFNDAAQQWE TPQPGQRYLQFQAGVQLANRLGALNEIEFSEFVMKAQGFADAINAAPDFPDMLHEVARARELDQFASEHDAQLTFVLRAR HAAWSPGYVQQNAARLGLVAGAIPGRLVLPAQGPGLPPVLTLTYDAQAAMSDDPEQSAVRDIVLSLDVAQVHRSQQPFAR LREVAAALGEAMDGVLCDQNGTPLPAMTMEPIAADLEQLYDKLDSRELSAGSALARRLFS >Mature_379_residues SNFQLGLIIAGALVLIVVVAYNAWTTHRNAPKRPRPAEADPAQEPVARHEPAFDGAVLTGAVLTGAGLTGAGLVGSGAEG EAEPGFDGHAVDLRDALDLPVPTAERRGGLDPLIDAIAPIVAEQQVSGDAALAALPPTRRAGSKPFAVEGFNDAAQQWET PQPGQRYLQFQAGVQLANRLGALNEIEFSEFVMKAQGFADAINAAPDFPDMLHEVARARELDQFASEHDAQLTFVLRARH AAWSPGYVQQNAARLGLVAGAIPGRLVLPAQGPGLPPVLTLTYDAQAAMSDDPEQSAVRDIVLSLDVAQVHRSQQPFARL REVAAALGEAMDGVLCDQNGTPLPAMTMEPIAADLEQLYDKLDSRELSAGSALARRLFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40144; Mature: 40012
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFQLGLIIAGALVLIVVVAYNAWTTHRNAPKRPRPAEADPAQEPVARHEPAFDGAVLT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHH GAVLTGAGLTGAGLVGSGAEGEAEPGFDGHAVDLRDALDLPVPTAERRGGLDPLIDAIAP HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHCCCCCCCHHHCCCCHHHHHHHHH IVAEQQVSGDAALAALPPTRRAGSKPFAVEGFNDAAQQWETPQPGQRYLQFQAGVQLANR HHHHHHCCCCEEEEECCCCCCCCCCCEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH LGALNEIEFSEFVMKAQGFADAINAAPDFPDMLHEVARARELDQFASEHDAQLTFVLRAR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHH HAAWSPGYVQQNAARLGLVAGAIPGRLVLPAQGPGLPPVLTLTYDAQAAMSDDPEQSAVR HCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEECCHHHCCCCHHHHHHH DIVLSLDVAQVHRSQQPFARLREVAAALGEAMDGVLCDQNGTPLPAMTMEPIAADLEQLY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHH DKLDSRELSAGSALARRLFS HHHCCHHCHHHHHHHHHHCC >Mature Secondary Structure SNFQLGLIIAGALVLIVVVAYNAWTTHRNAPKRPRPAEADPAQEPVARHEPAFDGAVLT CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHH GAVLTGAGLTGAGLVGSGAEGEAEPGFDGHAVDLRDALDLPVPTAERRGGLDPLIDAIAP HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHCCCCCCCHHHCCCCHHHHHHHHH IVAEQQVSGDAALAALPPTRRAGSKPFAVEGFNDAAQQWETPQPGQRYLQFQAGVQLANR HHHHHHCCCCEEEEECCCCCCCCCCCEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH LGALNEIEFSEFVMKAQGFADAINAAPDFPDMLHEVARARELDQFASEHDAQLTFVLRAR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHH HAAWSPGYVQQNAARLGLVAGAIPGRLVLPAQGPGLPPVLTLTYDAQAAMSDDPEQSAVR HCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEECCHHHCCCCHHHHHHH DIVLSLDVAQVHRSQQPFARLREVAAALGEAMDGVLCDQNGTPLPAMTMEPIAADLEQLY HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHH DKLDSRELSAGSALARRLFS HHHCCHHCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA