| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is 222110767
Identifier: 222110767
GI number: 222110767
Start: 1658028
End: 1658771
Strand: Direct
Name: 222110767
Synonym: Dtpsy_1571
Alternate gene names: NA
Gene position: 1658028-1658771 (Clockwise)
Preceding gene: 222110766
Following gene: 222110768
Centisome position: 43.67
GC content: 62.63
Gene sequence:
>744_bases ATGCAGACCACGACGAAGTTTTTTACGACAGAGCTAACCGCGCCGATTACCAGCGCGGCAGGCGGCGGCAGCGCCGGGGA TGCCGTCAAGACGGCAATCGAAAAGCTCAATACCGCGATGTTCCCGAGCGCGCAGAAGGACGACGGCAAAAGCGCCTGGT CAAAGGCGTGGGACTTCATCACGGGCGATGCCAGTATCGGAAAGGCGCTTATCGGCAGTCTCACCCAGGTTGCCTTCGAC GTGATCCTTTTCTTCATCTCCGGCCTGGTCAGCTTCGCGCTACTGCTGGCCCTCTATGGCCCCCTGTTGGCCCTGCAACT GGGTGTGATCTTCGGCCCGCTGCTGGTGGCCTGGCTGCCCTGGCAGCCGATGAGCCATCTCTTTCACAACTGGCTCAGGT TCATGCTGGCCAATGGCGTTTCGCTGGTCGTTGGTGTGACGCTGGCCACGCTGGGCGCGGGGGTCATCGGTGACTTTGCC GCCCAGATGGCGACCATCGGCGCCGATCCCGAATTGCCGTGGTTCATGGAATTGATGGTCAGGGCCGGCGCGTTCATGTC GTCGGTGGCGGTGATCGTTTTTGTCGCGTACTTCCTGATGAAGTCCGAAGACATCGCCAGCAGCCTGATTGGTGGCGGCG GCAGCGGCGCGGGCGCCGTGGCCAGCGGCATCATGCATGGCGCGAAGAACCTGCGCGGCGAGGTCGTGCGCAAGGCCGGC AAGCCAACGCTTCCGAAGAAGTAG
Upstream 100 bases:
>100_bases TCAAGCTGCCCAGCGATTATCCGACGCACTCTCGCGCGTGACGCGGGGCGCGCTGGTGCTGATCCTTCCGCTTGCGCTGC TGCTGAACTGGACGCCGTGG
Downstream 100 bases:
>100_bases CAGCGCCTGCAGGCGCAACACAGAGCCGGGAGACACGCTGCGCGCAACTCCCGGCTTCTTCGCATTCAGCCAGGCGCAGC CCCTTGCAGGGACTGCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MQTTTKFFTTELTAPITSAAGGGSAGDAVKTAIEKLNTAMFPSAQKDDGKSAWSKAWDFITGDASIGKALIGSLTQVAFD VILFFISGLVSFALLLALYGPLLALQLGVIFGPLLVAWLPWQPMSHLFHNWLRFMLANGVSLVVGVTLATLGAGVIGDFA AQMATIGADPELPWFMELMVRAGAFMSSVAVIVFVAYFLMKSEDIASSLIGGGGSGAGAVASGIMHGAKNLRGEVVRKAG KPTLPKK
Sequences:
>Translated_247_residues MQTTTKFFTTELTAPITSAAGGGSAGDAVKTAIEKLNTAMFPSAQKDDGKSAWSKAWDFITGDASIGKALIGSLTQVAFD VILFFISGLVSFALLLALYGPLLALQLGVIFGPLLVAWLPWQPMSHLFHNWLRFMLANGVSLVVGVTLATLGAGVIGDFA AQMATIGADPELPWFMELMVRAGAFMSSVAVIVFVAYFLMKSEDIASSLIGGGGSGAGAVASGIMHGAKNLRGEVVRKAG KPTLPKK >Mature_247_residues MQTTTKFFTTELTAPITSAAGGGSAGDAVKTAIEKLNTAMFPSAQKDDGKSAWSKAWDFITGDASIGKALIGSLTQVAFD VILFFISGLVSFALLLALYGPLLALQLGVIFGPLLVAWLPWQPMSHLFHNWLRFMLANGVSLVVGVTLATLGAGVIGDFA AQMATIGADPELPWFMELMVRAGAFMSSVAVIVFVAYFLMKSEDIASSLIGGGGSGAGAVASGIMHGAKNLRGEVVRKAG KPTLPKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25742; Mature: 25742
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTTTKFFTTELTAPITSAAGGGSAGDAVKTAIEKLNTAMFPSAQKDDGKSAWSKAWDFI CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH TGDASIGKALIGSLTQVAFDVILFFISGLVSFALLLALYGPLLALQLGVIFGPLLVAWLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WQPMSHLFHNWLRFMLANGVSLVVGVTLATLGAGVIGDFAAQMATIGADPELPWFMELMV CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RAGAFMSSVAVIVFVAYFLMKSEDIASSLIGGGGSGAGAVASGIMHGAKNLRGEVVRKAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC KPTLPKK CCCCCCC >Mature Secondary Structure MQTTTKFFTTELTAPITSAAGGGSAGDAVKTAIEKLNTAMFPSAQKDDGKSAWSKAWDFI CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH TGDASIGKALIGSLTQVAFDVILFFISGLVSFALLLALYGPLLALQLGVIFGPLLVAWLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WQPMSHLFHNWLRFMLANGVSLVVGVTLATLGAGVIGDFAAQMATIGADPELPWFMELMV CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RAGAFMSSVAVIVFVAYFLMKSEDIASSLIGGGGSGAGAVASGIMHGAKNLRGEVVRKAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC KPTLPKK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA