| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is 222110740
Identifier: 222110740
GI number: 222110740
Start: 1625932
End: 1626630
Strand: Direct
Name: 222110740
Synonym: Dtpsy_1543
Alternate gene names: NA
Gene position: 1625932-1626630 (Clockwise)
Preceding gene: 222110739
Following gene: 222110742
Centisome position: 42.83
GC content: 72.25
Gene sequence:
>699_bases ATGACCGAACCGCTGGTGATGCCTGTGGCGCAGGACGCCTTCGAGACGCTGGCGCAGGCGCGCCATTCCGTGCGCGCCTT CCTGCCGCGGCCCGTGCCCCTCGCGCTGCTGGAGCGGTTGCTGGCTGCGGCGCGGCTGGCGCCCAGCGGGGCCAATCTGC AGCCGGGTCGCTTCTGGGCCGTGGAGGGCGCGGTGCGCGAACGCCTGAGTGCCGCGCTGTGCCAGGCGTGGCGCGACCAG GTGCCTGAGGCCGAGGACTATGGCTATTTCCCCCGCCCCATGCCGCTGGCATTGCGCAAACGCCAGGTGGCAGCCGCGCA GGCGCTGTACGGGGCGCTGGGTGTGGCGCGCGGCGACGGCGCGGGTCGGGCCACGCAGTTCGAGCGCAACTACCGCTTCT TCGATGCACCCGTGGCGCTGATCGTCACCATCGACCGCGGTTTCGGCGCAGGTGGCTTCATGGACTTGGGCATGTGCCTG CACGGACTGATGCTGGCCGCGCAGTCCCAGGGGCTGGCCAGCTGTGCCATTGGTGCGCTGGCGAGCTACCCGCAGGTCGT GCGCGACGCGCTGGACCTGCCGGCCAGCGAGGCGGTCGTCTGCGGCATGGCGCTGGGCTGGGAAGACGCGGGCGCACCCG TCAACCGCACGCGCACCGAGCGCGAGGCGCTGGAGCGCTACTTCACCGTGCTGCGCTGA
Upstream 100 bases:
>100_bases AGGGTGCCGACCGCACCGACCGCACGCTGCGCGGCATGGCGTGCATTGCGGGTGCGGGTGGCCTGGGTGCGGCCACCTGG GTGGAAATGCCGGAGTGAGA
Downstream 100 bases:
>100_bases GGGAATGCGGAACACGTTCCCTCGCGTGTCGTGAGCCGCACCTTTTCTGCGGCCTGCTGCGTTGCATAACGGTCGCGATG GTGATGGCGGGGCTTTGCGT
Product: nitroreductase
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; P-Nitrobenzoate Reductase; NADH Dehydrogenase; NfnB Protein; Nitrobenzoate Nitroreductase; Oxidoreductase Protein; Nitroreductase Family; Nitrobenzene Nitroreductase; Nitrobenzoate Reductase
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTEPLVMPVAQDAFETLAQARHSVRAFLPRPVPLALLERLLAAARLAPSGANLQPGRFWAVEGAVRERLSAALCQAWRDQ VPEAEDYGYFPRPMPLALRKRQVAAAQALYGALGVARGDGAGRATQFERNYRFFDAPVALIVTIDRGFGAGGFMDLGMCL HGLMLAAQSQGLASCAIGALASYPQVVRDALDLPASEAVVCGMALGWEDAGAPVNRTRTEREALERYFTVLR
Sequences:
>Translated_232_residues MTEPLVMPVAQDAFETLAQARHSVRAFLPRPVPLALLERLLAAARLAPSGANLQPGRFWAVEGAVRERLSAALCQAWRDQ VPEAEDYGYFPRPMPLALRKRQVAAAQALYGALGVARGDGAGRATQFERNYRFFDAPVALIVTIDRGFGAGGFMDLGMCL HGLMLAAQSQGLASCAIGALASYPQVVRDALDLPASEAVVCGMALGWEDAGAPVNRTRTEREALERYFTVLR >Mature_231_residues TEPLVMPVAQDAFETLAQARHSVRAFLPRPVPLALLERLLAAARLAPSGANLQPGRFWAVEGAVRERLSAALCQAWRDQV PEAEDYGYFPRPMPLALRKRQVAAAQALYGALGVARGDGAGRATQFERNYRFFDAPVALIVTIDRGFGAGGFMDLGMCLH GLMLAAQSQGLASCAIGALASYPQVVRDALDLPASEAVVCGMALGWEDAGAPVNRTRTEREALERYFTVLR
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25028; Mature: 24897
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPLVMPVAQDAFETLAQARHSVRAFLPRPVPLALLERLLAAARLAPSGANLQPGRFWA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEE VEGAVRERLSAALCQAWRDQVPEAEDYGYFPRPMPLALRKRQVAAAQALYGALGVARGDG ECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC AGRATQFERNYRFFDAPVALIVTIDRGFGAGGFMDLGMCLHGLMLAAQSQGLASCAIGAL CCCCHHHHCCCEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ASYPQVVRDALDLPASEAVVCGMALGWEDAGAPVNRTRTEREALERYFTVLR HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TEPLVMPVAQDAFETLAQARHSVRAFLPRPVPLALLERLLAAARLAPSGANLQPGRFWA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEE VEGAVRERLSAALCQAWRDQVPEAEDYGYFPRPMPLALRKRQVAAAQALYGALGVARGDG ECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC AGRATQFERNYRFFDAPVALIVTIDRGFGAGGFMDLGMCLHGLMLAAQSQGLASCAIGAL CCCCHHHHCCCEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ASYPQVVRDALDLPASEAVVCGMALGWEDAGAPVNRTRTEREALERYFTVLR HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA