| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110736
Identifier: 222110736
GI number: 222110736
Start: 1622068
End: 1622661
Strand: Direct
Name: 222110736
Synonym: Dtpsy_1539
Alternate gene names: NA
Gene position: 1622068-1622661 (Clockwise)
Preceding gene: 222110735
Following gene: 222110737
Centisome position: 42.72
GC content: 71.89
Gene sequence:
>594_bases ATGGGTAGCCTCTACAGCGAACACCTCACCTGGCTGCACCGCTGGCCCGCGGGGTGCAAGCTGGCCGGCATGGCGGTGCT GGGCACGTTGCTGTTCGTGCTGTCGGCGCCGGGGGCGTTGGCGGCGGCGGGCGTGGCGTGCGCACTGTTGTGGTGGAGCC TGGGGCCGGCCACGCGCGTGGCGCGCCGGCTCATCGTGTCGGTGCTCATCGCCGCGGCGCTGGTGGCGGGCTTTCACCTG TGGATGGGACGACCCGAGGTGGCGGCGGTGAGCGCGCTGCGCCTGGCCTGCGCCTCCACACTGGGGGTGGCGCTCACCGT GAGCACGCGTCCCATGGACTTGCTGCAGGTGCTGGATGCGCTGCTGCGGCCCCTGGCGCGCCTTGGCCTGCGGCCGGAGC GCGTGTCGTTGCAACTGGCGCTGATGCTGCGGTTCACCGAACATTTTTTCGTGCAGTGGAAGAAGCTGGACGAAGCCCAC CGCCTGCGCACCGGCCGTGCCGGCGGCCTGCGGCTGGTCGCGCCGCTCACCGTGCAGATGCTGCAGGGGGCGCAGCGTGT GGCCGATGCCCTCTACGCCCGTTTGGGCGGCTGA
Upstream 100 bases:
>100_bases ATGAAGCCGCCGTTGCCCAACAGGTGGCGCGGGCCCGCGCCGCGGCGGGCATGCCACATGCCCATATGCGCGCCGCGGCC TGAGCGAAGGATGCACCGCC
Downstream 100 bases:
>100_bases CTATTCCTGTTTTTTCTTGTCGACCCAAGGAGTTGTATGACTGCTGCCATATCCCGCAAGGCCTCTCACTCCATGGCGCT GGTGGCGCTGTTCGCCGCGC
Product: cobalt transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MGSLYSEHLTWLHRWPAGCKLAGMAVLGTLLFVLSAPGALAAAGVACALLWWSLGPATRVARRLIVSVLIAAALVAGFHL WMGRPEVAAVSALRLACASTLGVALTVSTRPMDLLQVLDALLRPLARLGLRPERVSLQLALMLRFTEHFFVQWKKLDEAH RLRTGRAGGLRLVAPLTVQMLQGAQRVADALYARLGG
Sequences:
>Translated_197_residues MGSLYSEHLTWLHRWPAGCKLAGMAVLGTLLFVLSAPGALAAAGVACALLWWSLGPATRVARRLIVSVLIAAALVAGFHL WMGRPEVAAVSALRLACASTLGVALTVSTRPMDLLQVLDALLRPLARLGLRPERVSLQLALMLRFTEHFFVQWKKLDEAH RLRTGRAGGLRLVAPLTVQMLQGAQRVADALYARLGG >Mature_196_residues GSLYSEHLTWLHRWPAGCKLAGMAVLGTLLFVLSAPGALAAAGVACALLWWSLGPATRVARRLIVSVLIAAALVAGFHLW MGRPEVAAVSALRLACASTLGVALTVSTRPMDLLQVLDALLRPLARLGLRPERVSLQLALMLRFTEHFFVQWKKLDEAHR LRTGRAGGLRLVAPLTVQMLQGAQRVADALYARLGG
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21204; Mature: 21072
Theoretical pI: Translated: 11.85; Mature: 11.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLYSEHLTWLHRWPAGCKLAGMAVLGTLLFVLSAPGALAAAGVACALLWWSLGPATRV CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHH ARRLIVSVLIAAALVAGFHLWMGRPEVAAVSALRLACASTLGVALTVSTRPMDLLQVLDA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHH LLRPLARLGLRPERVSLQLALMLRFTEHFFVQWKKLDEAHRLRTGRAGGLRLVAPLTVQM HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH LQGAQRVADALYARLGG HHHHHHHHHHHHHHHCC >Mature Secondary Structure GSLYSEHLTWLHRWPAGCKLAGMAVLGTLLFVLSAPGALAAAGVACALLWWSLGPATRV CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHH ARRLIVSVLIAAALVAGFHLWMGRPEVAAVSALRLACASTLGVALTVSTRPMDLLQVLDA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHH LLRPLARLGLRPERVSLQLALMLRFTEHFFVQWKKLDEAHRLRTGRAGGLRLVAPLTVQM HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH LQGAQRVADALYARLGG HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA