| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110733
Identifier: 222110733
GI number: 222110733
Start: 1619316
End: 1619663
Strand: Direct
Name: 222110733
Synonym: Dtpsy_1536
Alternate gene names: NA
Gene position: 1619316-1619663 (Clockwise)
Preceding gene: 222110731
Following gene: 222110735
Centisome position: 42.65
GC content: 73.28
Gene sequence:
>348_bases ATGTCCGCCGGAGACTGGAAAGACCTGTACGCCGCCGCCTCCGCGGGGGATCTGGCCCGGGTGCGCTATCACATCAGCGC GGGCGTGGATCCCAACTACCAGCACCCCGAGGTGCTGTGCACGCCGCTCGTCGCCAGCCTGGTGCAGGGCCACGATGCGG TGGCGCGCTACCTGCTGGAGCACGGGGCGGATCCGCACCTGCTGTCGGAGTTCGACGGGCTCACGCCGCTGCAGGCTGCG CTGCGCCATGGCCGCGGTGAGCTGGCCGCACTGCTGCGCAGCCGGGGTGCGCGGGACGTGCCGCCGCCCAGGCGCGTGGC AGCGTGGCGGCGCTGGCTGCCGTTGTAG
Upstream 100 bases:
>100_bases TGGCGGGCGGTTGCCGTGGGGGCTCCCCGGTGTGCTGCGCGTACTGCGGCGTCTATATTGCGCGGCAGTGCCGTATGAGA ACCCGATGAAAGGAGCGCCC
Downstream 100 bases:
>100_bases CGCACGGGGCGTAGCGTCAAGGCATTTTTTGTGCTGTAGCGCTTACTGATAAAGCGCTGGCAGCTATAAAAAAAGGAGTA ATCAGCTTTGGATAGCGGCC
Product: ankyrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSAGDWKDLYAAASAGDLARVRYHISAGVDPNYQHPEVLCTPLVASLVQGHDAVARYLLEHGADPHLLSEFDGLTPLQAA LRHGRGELAALLRSRGARDVPPPRRVAAWRRWLPL
Sequences:
>Translated_115_residues MSAGDWKDLYAAASAGDLARVRYHISAGVDPNYQHPEVLCTPLVASLVQGHDAVARYLLEHGADPHLLSEFDGLTPLQAA LRHGRGELAALLRSRGARDVPPPRRVAAWRRWLPL >Mature_114_residues SAGDWKDLYAAASAGDLARVRYHISAGVDPNYQHPEVLCTPLVASLVQGHDAVARYLLEHGADPHLLSEFDGLTPLQAAL RHGRGELAALLRSRGARDVPPPRRVAAWRRWLPL
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12593; Mature: 12462
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGDWKDLYAAASAGDLARVRYHISAGVDPNYQHPEVLCTPLVASLVQGHDAVARYLLE CCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH HGADPHLLSEFDGLTPLQAALRHGRGELAALLRSRGARDVPPPRRVAAWRRWLPL CCCCCCHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SAGDWKDLYAAASAGDLARVRYHISAGVDPNYQHPEVLCTPLVASLVQGHDAVARYLLE CCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH HGADPHLLSEFDGLTPLQAALRHGRGELAALLRSRGARDVPPPRRVAAWRRWLPL CCCCCCHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA