| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is 222110731
Identifier: 222110731
GI number: 222110731
Start: 1617465
End: 1618439
Strand: Direct
Name: 222110731
Synonym: Dtpsy_1534
Alternate gene names: NA
Gene position: 1617465-1618439 (Clockwise)
Preceding gene: 222110730
Following gene: 222110733
Centisome position: 42.6
GC content: 65.33
Gene sequence:
>975_bases ATGTTCCGCAGAACCGTTCTTGCCGCTGGCGCAGTCCTGGCCCTGGCCGCAGGCGCACCCACGATGGCGCTGGCCAAGGA TGCCTGGCCGGTCAAGACCATCACGCTGGTGCAGCCCTACGCACCCGGCGGCACCAGCGACATGCTGGCGCGCATCATCG CCAACGAGCTGGAAAAGCGCATCACTGCCAGCGTGATCGTGGAAAGCAAGGCCGGTGCCAACGGCAACATCGCCACCGCC TACGTGAGCCGCGCCAAGCCCGACGGCGGCACCTTCCTGGTGGGCTCCAGCAGCCCGGTGGTGATCTCGCCCACGCTGTA CAAGAACGTGCCCTACGACCCGGTGAAGGACCTCACGCCCATCACCCCGCTGGCCAAGGCGCCGTTCCTGCTGGTGACGG GCGCCAACTCGGGCATCAACTCGGTGGATGAACTGCTCAAGCTCATCAAGGCCGACAAGATCAACTTCGGCTCGGCCGGC GCGGGCTCGCCCCAGCACATGATCGTGGAGATGTTCCACATGCAGGCCAAGGCCAAGACCATGCACGTGCCGTACAAGGG CTCCGCGCCGCTGGTGCTGGCCGTGATGTCCAACGAAGTGCAGTACGCCATCGACAACCCCGTGCCGCTCAAGCCGCAGA TCGAGGCCGGCAAGATCAAGGCGCTGGCCATCACCAGCAAAACCGCCTCGCCCAAGTTCCCGGGCGTGAAGCCGCTGGCG GAGCAGGGCTTCCCCGGCTTCGAGGCCGAGCCCTGGTACGGCATGATCGGCTCCAAGGGCCTGCCCAAGGACCTGGCCGA ACGCATGAACAAATACGTGCGTGAGATCCTGGCCCAGGAGAACGTGAAGCAGAAGATCTCCGACCTGGGCGCCGAGGCCT ATGGCCTGAGCACGGCCGACTTTGCCAAGCTGATCGCCGCCGATATTCAGAAGTGGGGTGCTGCGGTCAAGGCATCGGGC GCTACGGCGGACTAA
Upstream 100 bases:
>100_bases ATGATGCGTTCGCCCCAGCGGACGCTTTTTCTTTTCTGCAAGCGGCCCTTCGCGGGCCTCGTACACCGGCCCCACAAGGG CCTTCAATGAAGGAGAGCTT
Downstream 100 bases:
>100_bases ACGCATGCAATAGGTGACAAAAAAGGCCGTGAGGATTCACGGCCTTTTTTGCGTCTGACGCCCACCGGTCAAGCGCGGGC AGCTATCAATCAATGAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MFRRTVLAAGAVLALAAGAPTMALAKDAWPVKTITLVQPYAPGGTSDMLARIIANELEKRITASVIVESKAGANGNIATA YVSRAKPDGGTFLVGSSSPVVISPTLYKNVPYDPVKDLTPITPLAKAPFLLVTGANSGINSVDELLKLIKADKINFGSAG AGSPQHMIVEMFHMQAKAKTMHVPYKGSAPLVLAVMSNEVQYAIDNPVPLKPQIEAGKIKALAITSKTASPKFPGVKPLA EQGFPGFEAEPWYGMIGSKGLPKDLAERMNKYVREILAQENVKQKISDLGAEAYGLSTADFAKLIAADIQKWGAAVKASG ATAD
Sequences:
>Translated_324_residues MFRRTVLAAGAVLALAAGAPTMALAKDAWPVKTITLVQPYAPGGTSDMLARIIANELEKRITASVIVESKAGANGNIATA YVSRAKPDGGTFLVGSSSPVVISPTLYKNVPYDPVKDLTPITPLAKAPFLLVTGANSGINSVDELLKLIKADKINFGSAG AGSPQHMIVEMFHMQAKAKTMHVPYKGSAPLVLAVMSNEVQYAIDNPVPLKPQIEAGKIKALAITSKTASPKFPGVKPLA EQGFPGFEAEPWYGMIGSKGLPKDLAERMNKYVREILAQENVKQKISDLGAEAYGLSTADFAKLIAADIQKWGAAVKASG ATAD >Mature_324_residues MFRRTVLAAGAVLALAAGAPTMALAKDAWPVKTITLVQPYAPGGTSDMLARIIANELEKRITASVIVESKAGANGNIATA YVSRAKPDGGTFLVGSSSPVVISPTLYKNVPYDPVKDLTPITPLAKAPFLLVTGANSGINSVDELLKLIKADKINFGSAG AGSPQHMIVEMFHMQAKAKTMHVPYKGSAPLVLAVMSNEVQYAIDNPVPLKPQIEAGKIKALAITSKTASPKFPGVKPLA EQGFPGFEAEPWYGMIGSKGLPKDLAERMNKYVREILAQENVKQKISDLGAEAYGLSTADFAKLIAADIQKWGAAVKASG ATAD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34056; Mature: 34056
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRTVLAAGAVLALAAGAPTMALAKDAWPVKTITLVQPYAPGGTSDMLARIIANELEKR CCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH ITASVIVESKAGANGNIATAYVSRAKPDGGTFLVGSSSPVVISPTLYKNVPYDPVKDLTP HHHHEEEECCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEECCHHHCCCCCCCHHCCCC ITPLAKAPFLLVTGANSGINSVDELLKLIKADKINFGSAGAGSPQHMIVEMFHMQAKAKT CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHE MHVPYKGSAPLVLAVMSNEVQYAIDNPVPLKPQIEAGKIKALAITSKTASPKFPGVKPLA EECCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHH EQGFPGFEAEPWYGMIGSKGLPKDLAERMNKYVREILAQENVKQKISDLGAEAYGLSTAD HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHH FAKLIAADIQKWGAAVKASGATAD HHHHHHHHHHHHCCCEECCCCCCC >Mature Secondary Structure MFRRTVLAAGAVLALAAGAPTMALAKDAWPVKTITLVQPYAPGGTSDMLARIIANELEKR CCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH ITASVIVESKAGANGNIATAYVSRAKPDGGTFLVGSSSPVVISPTLYKNVPYDPVKDLTP HHHHEEEECCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEECCHHHCCCCCCCHHCCCC ITPLAKAPFLLVTGANSGINSVDELLKLIKADKINFGSAGAGSPQHMIVEMFHMQAKAKT CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHE MHVPYKGSAPLVLAVMSNEVQYAIDNPVPLKPQIEAGKIKALAITSKTASPKFPGVKPLA EECCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHH EQGFPGFEAEPWYGMIGSKGLPKDLAERMNKYVREILAQENVKQKISDLGAEAYGLSTAD HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHH FAKLIAADIQKWGAAVKASGATAD HHHHHHHHHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]