| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is yieF [H]
Identifier: 222110713
GI number: 222110713
Start: 1598502
End: 1599053
Strand: Direct
Name: yieF [H]
Synonym: Dtpsy_1516
Alternate gene names: 222110713
Gene position: 1598502-1599053 (Clockwise)
Preceding gene: 222110712
Following gene: 222110715
Centisome position: 42.1
GC content: 65.76
Gene sequence:
>552_bases ATGAGCCACTACCGCATTGCCGTCGTCGTCGGCAGCCTTCGCAAGGATTCGTTTAACCGCAAGCTGGCCCATGCGCTGGC GCGCATGGCGCCCGCGGACTGCGAATTCCACCAGGTGCGCATCGACGACCTGCCGCTGTACAACCAGGACGACGACGGCC AGCAGGCCGAGTCCGTGCAACGGCTCAAGAAGGAGATCGCCGGGTCGCAGGGCGTGCTGTTCGTCACGGCGGAATACAAC CGCTCCATCCCCGGCGTGCTCAAGAACGCCCTCGACAACGCATCGCGCCCCTATGGCCAGAGCGCCTGGGCGGGCAAGCC CGCGGGTGTGATCGGCGTGTCCATCGGCGCCATGGGCACGGCGATGGCGCAGCAGCACCTGCGCAATGTGCTGGCCTACC TGGACATGCCCACCCTGGGCCAGCCCGAGGCATTCATCCATGCCAAGGACGGCCTGTTCAACGAAGACGGCACCATCGGC GAGGGCAGCAAGGACTTCTTGCAGCGCTGGATGGACCGGTACATCGCCTGGGTCAAGCGCCACAATGGCTGA
Upstream 100 bases:
>100_bases TTGTCTGACAGCAGCGTTCCACGGCGGCCCGTAAGATGGTCCGGCCGCCCGCCACGGCGATGGCGCTGCGCGGCGCCTAC CTCTGCCAGAAAGGGTCCGT
Downstream 100 bases:
>100_bases CGATTGCTATCGATTCGATAGCTTGCCACGCTTGAAAATCAAGGGTTAGAACCCATTTTGATAGGAAAAAACCCGCCCGG GCATGGCCGGAGGCGGGTTT
Product: NADPH-dependent fmn reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSHYRIAVVVGSLRKDSFNRKLAHALARMAPADCEFHQVRIDDLPLYNQDDDGQQAESVQRLKKEIAGSQGVLFVTAEYN RSIPGVLKNALDNASRPYGQSAWAGKPAGVIGVSIGAMGTAMAQQHLRNVLAYLDMPTLGQPEAFIHAKDGLFNEDGTIG EGSKDFLQRWMDRYIAWVKRHNG
Sequences:
>Translated_183_residues MSHYRIAVVVGSLRKDSFNRKLAHALARMAPADCEFHQVRIDDLPLYNQDDDGQQAESVQRLKKEIAGSQGVLFVTAEYN RSIPGVLKNALDNASRPYGQSAWAGKPAGVIGVSIGAMGTAMAQQHLRNVLAYLDMPTLGQPEAFIHAKDGLFNEDGTIG EGSKDFLQRWMDRYIAWVKRHNG >Mature_182_residues SHYRIAVVVGSLRKDSFNRKLAHALARMAPADCEFHQVRIDDLPLYNQDDDGQQAESVQRLKKEIAGSQGVLFVTAEYNR SIPGVLKNALDNASRPYGQSAWAGKPAGVIGVSIGAMGTAMAQQHLRNVLAYLDMPTLGQPEAFIHAKDGLFNEDGTIGE GSKDFLQRWMDRYIAWVKRHNG
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=144, Percent_Identity=43.0555555555556, Blast_Score=101, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20225; Mature: 20094
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHYRIAVVVGSLRKDSFNRKLAHALARMAPADCEFHQVRIDDLPLYNQDDDGQQAESVQ CCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH RLKKEIAGSQGVLFVTAEYNRSIPGVLKNALDNASRPYGQSAWAGKPAGVIGVSIGAMGT HHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHH AMAQQHLRNVLAYLDMPTLGQPEAFIHAKDGLFNEDGTIGEGSKDFLQRWMDRYIAWVKR HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH HNG CCC >Mature Secondary Structure SHYRIAVVVGSLRKDSFNRKLAHALARMAPADCEFHQVRIDDLPLYNQDDDGQQAESVQ CCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH RLKKEIAGSQGVLFVTAEYNRSIPGVLKNALDNASRPYGQSAWAGKPAGVIGVSIGAMGT HHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHH AMAQQHLRNVLAYLDMPTLGQPEAFIHAKDGLFNEDGTIGEGSKDFLQRWMDRYIAWVKR HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH HNG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]