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The map label for this gene is 222110615

Identifier: 222110615

GI number: 222110615

Start: 1483033

End: 1485600

Strand: Direct

Name: 222110615

Synonym: Dtpsy_1416

Alternate gene names: NA

Gene position: 1483033-1485600 (Clockwise)

Preceding gene: 222110614

Following gene: 222110620

Centisome position: 39.06

GC content: 73.36

Gene sequence:

>2568_bases
ATGACGGCCGCCCCGCGCCCCCACGTGGTGGCCGTGCGCGCGCTGTGCGAGTTCACGGCCCGCACGGGTGACCTGGACCT
GCGCTTCACCCCCGCCCCCAGCGCGCTCGAAGGCATGGAAGGCCACCGTGCGGTGCAGCAGCGCCGCGGCGCAGGCTACG
AGGCCGAAGTGCCGCTGAGCGGCACGTACGACCACCTGATGGTGCGCGGCCGCGCCGATGGCTGGAACGCGGCGCTGGGG
CAGCTCGAAGAAATCAAGACCTACCGCGGCACGCTGGACAGCGTGCGCCCCCACCACCGCGCGCTGCACTGGGCCCAGGC
CCAGGTGTACGGCCACCTGCTGTGCCAGGCGCGCGGGTTGGCGGGGCTCAAGCTTGCGCTGGTCTACGTGCACGCCACCA
CCCATGCCGAGACCGTGCTGGTGCAGGAACACACCGCCGCCGCGCTGCAGGCGTTCTTTGCCACGCAGTGCCAGCGCTAT
CTGGCCTGGGCGCACAGCGAGGCCGCGCACCGCCAGCAGCGCAACGCCGCCCTGGTGCGGCTGCGCTTTCCGCTGCCCGC
ATTCCGCGCCGGGCAGCGCGAGCTGGCCGTGGCCGTGTACCGCACCGCACACCCCAACGCAGAGGGCGCCAGCGCCCCCG
CCGGGCGTTGCCTGCTGGCCCAGGCGCCCACCGGCATCGGCAAGACCCTGGGCACGCTGTTCCCGCTGCTCAAGGCTATG
GCGCCCCCGGCCACGGTACCCCCGGCGATGACCACGCAAGGGCAGGGCAGGCCGGCTCCGGCCGCTGCCGCATCCGGCGC
CGCCGCCGATGCGGTGGCCAGAGGGGACAAGGAAGCCATCAAAAAAGAGAGCGCGTCACGCTTGCCCAGTGGCCTGGACA
AGCTGTTTTTCCTCACCGCCAAGGGCACGGGCCACGGCCCGGCGCTGCACGCGCTGGCCCAGTTGCAGGGCGCGCTGGCA
CCCCACGCGCCCGGCACGCCGCTGCGCGTGCTGGACCTGCACGCGCGCGACAAGACCTGCGAACACCCCGGCAGCGCCTG
CCATGGCGATGCCTGCCCGCTGGCGCGCGGCTTCTTTGACCGGCTGCCCGCCGCCCGCGCCGCCGCCGTGCAGCAGCCCG
CGCCGTGGGATGCACCCGCCGTGCGCAGCGTGGCGCTGCAGCACGGCATCTGCCCCTACTACCTGTCGCAAGAGCTGGTG
CGCTGGGCCGACGTGGTGGTGGCCGACTACCACTACTACTACGACAGCGCCGCCATGCTGTACGCCCTCACGCAGCAGCA
GGGCTGGCGCGTGGCCGTGCTGGTGGACGAAGCCCACAACCTGCTGGAGCGCGCACGCAGCATGTACACGGCGCCGCTCT
CGCCCTTCGAGCTGGCCGCCGCACGCCAGACCGCCACCGGTCCCGTCAAGAAGGCGCTCGACGCCTTGCACCGCCAGTGG
AACGCGCTGAGCAAGACCCTGGGCCAGAGCGTAGAGGACGCTGACACGCCGGGCGCACCCGGCGCACTGCACACCGGCGC
CACCGCACCCGCGCACCCCCTCGCCGCCACGCCCACTTACCAGGCCCACGCCACCGTGCCGCCCGCGCTGCTGGGCGCCG
TGCAGCGCGCCGTGGGCGCCATGGCCGAGGCCCAGGCCGACCAGCCCCTGCCGCCGGGCGACGCGGTGCTGGCGTTCTAC
TGGTCGCTGCTGCACTTCCAGGCCCTGGCCGAGCAGTTCGGCCCGCATGCGCTGTTCGACCTGCAGCACACCGCCACGCC
ACCGCGCAGCCGCAGCGGCCGGGCCCGCACACCCGCCACCACGCTGAGCATCCGCAACGTCATGCCCGCACCGCACCTGG
CGGCGCGCCACGCGGCAGCGCAGGCCACGGTGCTGTTCTCGGGCACGCTCAGCCCGCCGCAGTTCTACCGCGACCTGCTG
GGCCTGCCGCCCGACACCGTCTGGCTGGACGTGGCCGCCCCCTTTGCCGCCCACCAGCTGCAGGTGCGCGTGGCCCCGCA
CATCTCCACCCGCTGGCGCGACCGCGAGGCCTCGCTCGCCCCCATCGCCGATCTGGTGGCCGCGCAGTACGCGCACCAGC
CCGGCAACTACCTGTGCTTTGCCAGCAGCTTCGACTACTTGCAGCGCCTGGCCGCCACCCTGGCCCAGCGCCACCCGCAG
GTGCCCCAATGGCAGCAAACGCGCGAGATGGACGATGCCAGCCGCGCCGCCTTCCTCGCCCGCTTCACCGAGGGCGGCCA
GGGCGTGGGCCTGGCCGTGCTGGGCGGCGCCTTTGCCGAAGGCGTGGACCTGCCGGGCACCCGCCTCATCGGCGCCTTCA
TCGCCACGCTGGGCCTGCCGCAGGTGAACGCGGTGAACGACGCCATGCAATGTGCGCTGGACGAGGTGATGGGCCCCGGC
CAGGGCTATGCCTGCACCTACCTCTACCCCGGCCTGCGCAAGGTGGTGCAGGCCGCCGGCCGCGTGATCCGCACCGAACA
GGACCGGGGCGTGGTGGTGCTGATGGACGACCGCTTTCAGCGTGCAGAGGTGCGCGCGTTGTTGCCACGGTGGTGGCAGG
TGGGGTGA

Upstream 100 bases:

>100_bases
CCGGCGACAAGCTGCAGGACAACCAGATCCGCTGGCTGGATTACTGCGTGGCGCAGGGCATTCCGGTGCAGGTGTGCCAC
GTGCAGTGGTGCGGCCCGGC

Downstream 100 bases:

>100_bases
GGGGCTGGGTTCGGAGGTGGGGCAGCACGCGTGCCCGTGATACCGAAAGGCGCTGGATGCTATGAATTTGGTAGCTGCTA
GCGCTTATCTAAAGCGCCTT

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 855; Mature: 854

Protein sequence:

>855_residues
MTAAPRPHVVAVRALCEFTARTGDLDLRFTPAPSALEGMEGHRAVQQRRGAGYEAEVPLSGTYDHLMVRGRADGWNAALG
QLEEIKTYRGTLDSVRPHHRALHWAQAQVYGHLLCQARGLAGLKLALVYVHATTHAETVLVQEHTAAALQAFFATQCQRY
LAWAHSEAAHRQQRNAALVRLRFPLPAFRAGQRELAVAVYRTAHPNAEGASAPAGRCLLAQAPTGIGKTLGTLFPLLKAM
APPATVPPAMTTQGQGRPAPAAAASGAAADAVARGDKEAIKKESASRLPSGLDKLFFLTAKGTGHGPALHALAQLQGALA
PHAPGTPLRVLDLHARDKTCEHPGSACHGDACPLARGFFDRLPAARAAAVQQPAPWDAPAVRSVALQHGICPYYLSQELV
RWADVVVADYHYYYDSAAMLYALTQQQGWRVAVLVDEAHNLLERARSMYTAPLSPFELAAARQTATGPVKKALDALHRQW
NALSKTLGQSVEDADTPGAPGALHTGATAPAHPLAATPTYQAHATVPPALLGAVQRAVGAMAEAQADQPLPPGDAVLAFY
WSLLHFQALAEQFGPHALFDLQHTATPPRSRSGRARTPATTLSIRNVMPAPHLAARHAAAQATVLFSGTLSPPQFYRDLL
GLPPDTVWLDVAAPFAAHQLQVRVAPHISTRWRDREASLAPIADLVAAQYAHQPGNYLCFASSFDYLQRLAATLAQRHPQ
VPQWQQTREMDDASRAAFLARFTEGGQGVGLAVLGGAFAEGVDLPGTRLIGAFIATLGLPQVNAVNDAMQCALDEVMGPG
QGYACTYLYPGLRKVVQAAGRVIRTEQDRGVVVLMDDRFQRAEVRALLPRWWQVG

Sequences:

>Translated_855_residues
MTAAPRPHVVAVRALCEFTARTGDLDLRFTPAPSALEGMEGHRAVQQRRGAGYEAEVPLSGTYDHLMVRGRADGWNAALG
QLEEIKTYRGTLDSVRPHHRALHWAQAQVYGHLLCQARGLAGLKLALVYVHATTHAETVLVQEHTAAALQAFFATQCQRY
LAWAHSEAAHRQQRNAALVRLRFPLPAFRAGQRELAVAVYRTAHPNAEGASAPAGRCLLAQAPTGIGKTLGTLFPLLKAM
APPATVPPAMTTQGQGRPAPAAAASGAAADAVARGDKEAIKKESASRLPSGLDKLFFLTAKGTGHGPALHALAQLQGALA
PHAPGTPLRVLDLHARDKTCEHPGSACHGDACPLARGFFDRLPAARAAAVQQPAPWDAPAVRSVALQHGICPYYLSQELV
RWADVVVADYHYYYDSAAMLYALTQQQGWRVAVLVDEAHNLLERARSMYTAPLSPFELAAARQTATGPVKKALDALHRQW
NALSKTLGQSVEDADTPGAPGALHTGATAPAHPLAATPTYQAHATVPPALLGAVQRAVGAMAEAQADQPLPPGDAVLAFY
WSLLHFQALAEQFGPHALFDLQHTATPPRSRSGRARTPATTLSIRNVMPAPHLAARHAAAQATVLFSGTLSPPQFYRDLL
GLPPDTVWLDVAAPFAAHQLQVRVAPHISTRWRDREASLAPIADLVAAQYAHQPGNYLCFASSFDYLQRLAATLAQRHPQ
VPQWQQTREMDDASRAAFLARFTEGGQGVGLAVLGGAFAEGVDLPGTRLIGAFIATLGLPQVNAVNDAMQCALDEVMGPG
QGYACTYLYPGLRKVVQAAGRVIRTEQDRGVVVLMDDRFQRAEVRALLPRWWQVG
>Mature_854_residues
TAAPRPHVVAVRALCEFTARTGDLDLRFTPAPSALEGMEGHRAVQQRRGAGYEAEVPLSGTYDHLMVRGRADGWNAALGQ
LEEIKTYRGTLDSVRPHHRALHWAQAQVYGHLLCQARGLAGLKLALVYVHATTHAETVLVQEHTAAALQAFFATQCQRYL
AWAHSEAAHRQQRNAALVRLRFPLPAFRAGQRELAVAVYRTAHPNAEGASAPAGRCLLAQAPTGIGKTLGTLFPLLKAMA
PPATVPPAMTTQGQGRPAPAAAASGAAADAVARGDKEAIKKESASRLPSGLDKLFFLTAKGTGHGPALHALAQLQGALAP
HAPGTPLRVLDLHARDKTCEHPGSACHGDACPLARGFFDRLPAARAAAVQQPAPWDAPAVRSVALQHGICPYYLSQELVR
WADVVVADYHYYYDSAAMLYALTQQQGWRVAVLVDEAHNLLERARSMYTAPLSPFELAAARQTATGPVKKALDALHRQWN
ALSKTLGQSVEDADTPGAPGALHTGATAPAHPLAATPTYQAHATVPPALLGAVQRAVGAMAEAQADQPLPPGDAVLAFYW
SLLHFQALAEQFGPHALFDLQHTATPPRSRSGRARTPATTLSIRNVMPAPHLAARHAAAQATVLFSGTLSPPQFYRDLLG
LPPDTVWLDVAAPFAAHQLQVRVAPHISTRWRDREASLAPIADLVAAQYAHQPGNYLCFASSFDYLQRLAATLAQRHPQV
PQWQQTREMDDASRAAFLARFTEGGQGVGLAVLGGAFAEGVDLPGTRLIGAFIATLGLPQVNAVNDAMQCALDEVMGPGQ
GYACTYLYPGLRKVVQAAGRVIRTEQDRGVVVLMDDRFQRAEVRALLPRWWQVG

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI15834617, Length=254, Percent_Identity=25.9842519685039, Blast_Score=73, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71994598, Length=252, Percent_Identity=25, Blast_Score=70, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650 [H]

Pfam domain/function: PF06733 DEAD_2 [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 91628; Mature: 91497

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAPRPHVVAVRALCEFTARTGDLDLRFTPAPSALEGMEGHRAVQQRRGAGYEAEVPLS
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCHHHHHHHHHCCCCCEECCCCC
GTYDHLMVRGRADGWNAALGQLEEIKTYRGTLDSVRPHHRALHWAQAQVYGHLLCQARGL
CCHHHEEEECCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
AGLKLALVYVHATTHAETVLVQEHTAAALQAFFATQCQRYLAWAHSEAAHRQQRNAALVR
CCEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
LRFPLPAFRAGQRELAVAVYRTAHPNAEGASAPAGRCLLAQAPTGIGKTLGTLFPLLKAM
EECCCCHHHCCCHHEEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
APPATVPPAMTTQGQGRPAPAAAASGAAADAVARGDKEAIKKESASRLPSGLDKLFFLTA
CCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEE
KGTGHGPALHALAQLQGALAPHAPGTPLRVLDLHARDKTCEHPGSACHGDACPLARGFFD
CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
RLPAARAAAVQQPAPWDAPAVRSVALQHGICPYYLSQELVRWADVVVADYHYYYDSAAML
HCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YALTQQQGWRVAVLVDEAHNLLERARSMYTAPLSPFELAAARQTATGPVKKALDALHRQW
HHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
NALSKTLGQSVEDADTPGAPGALHTGATAPAHPLAATPTYQAHATVPPALLGAVQRAVGA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
MAEAQADQPLPPGDAVLAFYWSLLHFQALAEQFGPHALFDLQHTATPPRSRSGRARTPAT
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCCCCCCCCCCCCCCCCH
TLSIRNVMPAPHLAARHAAAQATVLFSGTLSPPQFYRDLLGLPPDTVWLDVAAPFAAHQL
HEEHHHCCCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCCHHEE
QVRVAPHISTRWRDREASLAPIADLVAAQYAHQPGNYLCFASSFDYLQRLAATLAQRHPQ
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCC
VPQWQQTREMDDASRAAFLARFTEGGQGVGLAVLGGAFAEGVDLPGTRLIGAFIATLGLP
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHCCCCCCHHHHHHHHHHHHCCC
QVNAVNDAMQCALDEVMGPGQGYACTYLYPGLRKVVQAAGRVIRTEQDRGVVVLMDDRFQ
CCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHEEECCCCCEEEEECCCCH
RAEVRALLPRWWQVG
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAAPRPHVVAVRALCEFTARTGDLDLRFTPAPSALEGMEGHRAVQQRRGAGYEAEVPLS
CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCHHHHHHHHHCCCCCEECCCCC
GTYDHLMVRGRADGWNAALGQLEEIKTYRGTLDSVRPHHRALHWAQAQVYGHLLCQARGL
CCHHHEEEECCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
AGLKLALVYVHATTHAETVLVQEHTAAALQAFFATQCQRYLAWAHSEAAHRQQRNAALVR
CCEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
LRFPLPAFRAGQRELAVAVYRTAHPNAEGASAPAGRCLLAQAPTGIGKTLGTLFPLLKAM
EECCCCHHHCCCHHEEEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
APPATVPPAMTTQGQGRPAPAAAASGAAADAVARGDKEAIKKESASRLPSGLDKLFFLTA
CCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEE
KGTGHGPALHALAQLQGALAPHAPGTPLRVLDLHARDKTCEHPGSACHGDACPLARGFFD
CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
RLPAARAAAVQQPAPWDAPAVRSVALQHGICPYYLSQELVRWADVVVADYHYYYDSAAML
HCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YALTQQQGWRVAVLVDEAHNLLERARSMYTAPLSPFELAAARQTATGPVKKALDALHRQW
HHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
NALSKTLGQSVEDADTPGAPGALHTGATAPAHPLAATPTYQAHATVPPALLGAVQRAVGA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
MAEAQADQPLPPGDAVLAFYWSLLHFQALAEQFGPHALFDLQHTATPPRSRSGRARTPAT
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCCCCCCCCCCCCCCCCH
TLSIRNVMPAPHLAARHAAAQATVLFSGTLSPPQFYRDLLGLPPDTVWLDVAAPFAAHQL
HEEHHHCCCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCCHHEE
QVRVAPHISTRWRDREASLAPIADLVAAQYAHQPGNYLCFASSFDYLQRLAATLAQRHPQ
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCC
VPQWQQTREMDDASRAAFLARFTEGGQGVGLAVLGGAFAEGVDLPGTRLIGAFIATLGLP
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHCCCCCCHHHHHHHHHHHHCCC
QVNAVNDAMQCALDEVMGPGQGYACTYLYPGLRKVVQAAGRVIRTEQDRGVVVLMDDRFQ
CCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHEEECCCCCEEEEECCCCH
RAEVRALLPRWWQVG
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11029001 [H]