| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is blh [H]
Identifier: 222110610
GI number: 222110610
Start: 1477325
End: 1478227
Strand: Direct
Name: blh [H]
Synonym: Dtpsy_1411
Alternate gene names: 222110610
Gene position: 1477325-1478227 (Clockwise)
Preceding gene: 222110605
Following gene: 222110614
Centisome position: 38.91
GC content: 67.66
Gene sequence:
>903_bases ATGCCCCACGCCTCCATGCATATCGAGCCCTTCTTCGACCCCGTGACGGGCACCGTGAGCTATGTGCTCGCAGACACCGA CGCCGGCCAAGCGGCCGTGATCGACCCCGTGCTGGATTTCGAGCCGAAGTCCGGCACGCTGACCAGCGCCTCATCGGACC GCATCATTGAATACGTGCGCCGCCAGGGCTGGCAGGTGCAGTGGATCCTGGAAACCCACGCACACGCCGACCATCTCTCG GGCGCGCAGCACATACGCCACCACCTCGGCGGCAAGGTCGCCATCGGCGCGCACATCCGCGCGGTGCAGCAGCTCTTTCG CAGCGTGTTCCATTTCGAGCGCAGCTTCCTGCCCGACGGCAGCCAGTTCGACCACCTGTTCGAGGACGGCGAGACCTTCC ATGTCGGCGGGCTGGAGCTGACGGCGCTGCATGTGCCGGGCCATACGCCTGCCGACATGGCCTACCGCGTGGGTGACGAC GTGTTCGTGGGCGACACGCTGTTCATGCCCGACGTGGGTACGGCCCGCGCGGACTTTCCGGGTGGCGATGCCGCCACGCT GTACCGCTCCATCCAGCGCCTGCTGGCGCTGCCCGCGCACACCCGACTGCACATGTGCCACGACTATCCGCCCGAGAACC GCGCACCTGCCTGGGTCAGCACCGTGGCAGAGCAACGCAGCGGCAACATCCATGTGCACGAGGGCGTGACCGAGGCCGCG TTCGTGCAGATGCGCACCGCGCGGGACGCCACACTGGCGATGCCCACCCTCATCCTGCCTTCGGTGCAGGTCAATGTGCG CGCCGGCAAGCTGCCGCCCGCGCAGGACGACGGGCGTACCTATATCCAGCTGCCCATCAATGCGTTCCTGAAAGGGGCTG GCGCGCCGCAGGGCGTGTCGTGA
Upstream 100 bases:
>100_bases GTGCAAGACAATATGTTTTCATATAATATATCAAAAAATAAACTGTTGTTGGTTGGTGGTGCTGCTTCGGCACTTCCGTC TTCATTGCGAAAGGACCTTC
Downstream 100 bases:
>100_bases TGCCGGCGGCGCACCTCTTTGCGCCAGCGGCCGCGTTGCTAAGGGGCGGAGTGGCCGCTGATGAGCGCGAGGTGTTGGGC CAGCGTGGCAGCCGACAGCT
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MPHASMHIEPFFDPVTGTVSYVLADTDAGQAAVIDPVLDFEPKSGTLTSASSDRIIEYVRRQGWQVQWILETHAHADHLS GAQHIRHHLGGKVAIGAHIRAVQQLFRSVFHFERSFLPDGSQFDHLFEDGETFHVGGLELTALHVPGHTPADMAYRVGDD VFVGDTLFMPDVGTARADFPGGDAATLYRSIQRLLALPAHTRLHMCHDYPPENRAPAWVSTVAEQRSGNIHVHEGVTEAA FVQMRTARDATLAMPTLILPSVQVNVRAGKLPPAQDDGRTYIQLPINAFLKGAGAPQGVS
Sequences:
>Translated_300_residues MPHASMHIEPFFDPVTGTVSYVLADTDAGQAAVIDPVLDFEPKSGTLTSASSDRIIEYVRRQGWQVQWILETHAHADHLS GAQHIRHHLGGKVAIGAHIRAVQQLFRSVFHFERSFLPDGSQFDHLFEDGETFHVGGLELTALHVPGHTPADMAYRVGDD VFVGDTLFMPDVGTARADFPGGDAATLYRSIQRLLALPAHTRLHMCHDYPPENRAPAWVSTVAEQRSGNIHVHEGVTEAA FVQMRTARDATLAMPTLILPSVQVNVRAGKLPPAQDDGRTYIQLPINAFLKGAGAPQGVS >Mature_299_residues PHASMHIEPFFDPVTGTVSYVLADTDAGQAAVIDPVLDFEPKSGTLTSASSDRIIEYVRRQGWQVQWILETHAHADHLSG AQHIRHHLGGKVAIGAHIRAVQQLFRSVFHFERSFLPDGSQFDHLFEDGETFHVGGLELTALHVPGHTPADMAYRVGDDV FVGDTLFMPDVGTARADFPGGDAATLYRSIQRLLALPAHTRLHMCHDYPPENRAPAWVSTVAEQRSGNIHVHEGVTEAAF VQMRTARDATLAMPTLILPSVQVNVRAGKLPPAQDDGRTYIQLPINAFLKGAGAPQGVS
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=273, Percent_Identity=28.5714285714286, Blast_Score=101, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17538952, Length=275, Percent_Identity=25.4545454545455, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI221330176, Length=262, Percent_Identity=28.2442748091603, Blast_Score=101, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 32737; Mature: 32606
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHASMHIEPFFDPVTGTVSYVLADTDAGQAAVIDPVLDFEPKSGTLTSASSDRIIEYVR CCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECHHHCCCCCCCCEECCCHHHHHHHHH RQGWQVQWILETHAHADHLSGAQHIRHHLGGKVAIGAHIRAVQQLFRSVFHFERSFLPDG HCCCEEEEEEECCCCHHHCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCC SQFDHLFEDGETFHVGGLELTALHVPGHTPADMAYRVGDDVFVGDTLFMPDVGTARADFP CHHHHHHCCCCEEEECCEEEEEEECCCCCCHHHHHHCCCCEEECCEEECCCCCCCCCCCC GGDAATLYRSIQRLLALPAHTRLHMCHDYPPENRAPAWVSTVAEQRSGNIHVHEGVTEAA CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHH FVQMRTARDATLAMPTLILPSVQVNVRAGKLPPAQDDGRTYIQLPINAFLKGAGAPQGVS HHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCC >Mature Secondary Structure PHASMHIEPFFDPVTGTVSYVLADTDAGQAAVIDPVLDFEPKSGTLTSASSDRIIEYVR CCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECHHHCCCCCCCCEECCCHHHHHHHHH RQGWQVQWILETHAHADHLSGAQHIRHHLGGKVAIGAHIRAVQQLFRSVFHFERSFLPDG HCCCEEEEEEECCCCHHHCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCC SQFDHLFEDGETFHVGGLELTALHVPGHTPADMAYRVGDDVFVGDTLFMPDVGTARADFP CHHHHHHCCCCEEEECCEEEEEEECCCCCCHHHHHHCCCCEEECCEEECCCCCCCCCCCC GGDAATLYRSIQRLLALPAHTRLHMCHDYPPENRAPAWVSTVAEQRSGNIHVHEGVTEAA CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHH FVQMRTARDATLAMPTLILPSVQVNVRAGKLPPAQDDGRTYIQLPINAFLKGAGAPQGVS HHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]