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The map label for this gene is paiB [H]

Identifier: 222110604

GI number: 222110604

Start: 1473671

End: 1474291

Strand: Direct

Name: paiB [H]

Synonym: Dtpsy_1405

Alternate gene names: 222110604

Gene position: 1473671-1474291 (Clockwise)

Preceding gene: 222110603

Following gene: 222110605

Centisome position: 38.82

GC content: 61.67

Gene sequence:

>621_bases
ATGTACCTACCTGCACAATTCGCCGAGTCCCGGATTGGGGAGCTTCACCGCATCGTCCGCGAGAACGCGCTGGGCATGCT
GGTGACACACACTCCCGCCGGTTTGGAGGCCAACCACCTTCCATTTTTTCTGGATGGCGACATGCTGCTGGCGCATGTGG
CGCGTGGCAATCCCATCTGGCGCGAGGTACGCGACGGCGATCAAGTGCTTGTCGTCTTCCGCGGCGTCGAAGGTTATATC
TCTCCCAACTGGTACCCCGGTAAACAGGAGACGCATCGGCGCGTGCCTACCTGGAACTACGAGGTTGTCCATGCCCACGG
AACGATTCATGTCCGCGACGATGTGAAATTCGTTCGCAGGGTGGTCGCCTTGCTAACGCGCCAGCATGAGGCGGGGCAGG
CACAGCCGTGGAAGATGGGCGATGCGCCGCCAGACTACCTGGATGAGCAACTGCGGCATATCGTGGGCATCGAGATCCGT
CTCGGGCGACTGGAAGGAAAGCGCAAGCTGAACCAGCACCACAGCGAGCAAGACCGCGAGGGCGCGATTCAAGGACTGGA
GTCCCGCGGCAACCATGGGCTCGCCAAAGCCATGAGGGAGGCGACGCCCCCCACATCGTGA

Upstream 100 bases:

>100_bases
GCCTTAGGGGCCTGTCCATCCTTTGCGCAGCGGGTTTGGATAGGCGCCAAACGGGCGCTTGGCTGAAAGGCTTCCGGCAA
CTTTTTTCACCACGCACTTT

Downstream 100 bases:

>100_bases
CCCGCAACTCCTTGGCCGGCCGGCTTGCGGCCATGCGCGGAGCGGGGTGGCGGGCCTCAGTGCGTTGCCTGCCAGGTGAA
TGCGCTGGCCAGCAAACGAT

Product: fmn-binding negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MYLPAQFAESRIGELHRIVRENALGMLVTHTPAGLEANHLPFFLDGDMLLAHVARGNPIWREVRDGDQVLVVFRGVEGYI
SPNWYPGKQETHRRVPTWNYEVVHAHGTIHVRDDVKFVRRVVALLTRQHEAGQAQPWKMGDAPPDYLDEQLRHIVGIEIR
LGRLEGKRKLNQHHSEQDREGAIQGLESRGNHGLAKAMREATPPTS

Sequences:

>Translated_206_residues
MYLPAQFAESRIGELHRIVRENALGMLVTHTPAGLEANHLPFFLDGDMLLAHVARGNPIWREVRDGDQVLVVFRGVEGYI
SPNWYPGKQETHRRVPTWNYEVVHAHGTIHVRDDVKFVRRVVALLTRQHEAGQAQPWKMGDAPPDYLDEQLRHIVGIEIR
LGRLEGKRKLNQHHSEQDREGAIQGLESRGNHGLAKAMREATPPTS
>Mature_206_residues
MYLPAQFAESRIGELHRIVRENALGMLVTHTPAGLEANHLPFFLDGDMLLAHVARGNPIWREVRDGDQVLVVFRGVEGYI
SPNWYPGKQETHRRVPTWNYEVVHAHGTIHVRDDVKFVRRVVALLTRQHEAGQAQPWKMGDAPPDYLDEQLRHIVGIEIR
LGRLEGKRKLNQHHSEQDREGAIQGLESRGNHGLAKAMREATPPTS

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=154, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 23428; Mature: 23428

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLPAQFAESRIGELHRIVRENALGMLVTHTPAGLEANHLPFFLDGDMLLAHVARGNPIW
CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCHHHHHHHHCCCHHH
REVRDGDQVLVVFRGVEGYISPNWYPGKQETHRRVPTWNYEVVHAHGTIHVRDDVKFVRR
HHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCEEEECHHHHHHHH
VVALLTRQHEAGQAQPWKMGDAPPDYLDEQLRHIVGIEIRLGRLEGKRKLNQHHSEQDRE
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCHHHHH
GAIQGLESRGNHGLAKAMREATPPTS
HHHHHHHCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MYLPAQFAESRIGELHRIVRENALGMLVTHTPAGLEANHLPFFLDGDMLLAHVARGNPIW
CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCHHHHHHHHCCCHHH
REVRDGDQVLVVFRGVEGYISPNWYPGKQETHRRVPTWNYEVVHAHGTIHVRDDVKFVRR
HHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCEEEECHHHHHHHH
VVALLTRQHEAGQAQPWKMGDAPPDYLDEQLRHIVGIEIRLGRLEGKRKLNQHHSEQDRE
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCHHHHH
GAIQGLESRGNHGLAKAMREATPPTS
HHHHHHHCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]