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The map label for this gene is 222110536

Identifier: 222110536

GI number: 222110536

Start: 1396768

End: 1397811

Strand: Direct

Name: 222110536

Synonym: Dtpsy_1335

Alternate gene names: NA

Gene position: 1396768-1397811 (Clockwise)

Preceding gene: 222110535

Following gene: 222110537

Centisome position: 36.79

GC content: 64.75

Gene sequence:

>1044_bases
ATGCGATCCAAGCAACCCACCGCGAGCGACGCTCTCCCATCTGGCGCGAAGCAGGGGCAGGGCAAGGCCCCCACCTCGAC
ACGCACCCTCTGGAAGGGGGCGATCAGCTTTGGCCTCGTCCATATTCCCGTGGGCTTGTACTCGGCGACCGTCAGCTCGG
GCATCGACTTTGACTGGCTGGACCGCCGGTCGATGGAGCCGGTGGGGTACAAGCGTGTGAACAAAATCACGGGCAAGGAA
ATCGCCACGGCCGATATCGTCAAGGGTGTGGAGTATGAAGAAGGCCGCTACGTCATTCTGACGCCCGAGGAAATCGCGAC
CGCCTTTCCTAAGGTCACGCAGACGATCGAGATCGAGGCGTTTCTTAACGCCGACGAGATCCCCTTTGTCTACCTGGAGC
GTCCCTATTACACGGCACCCCTCAAGCGTGGCGAAAAGGTGTACGCACTGCTGCGCGAGGCCCTGCGCCAGAGCAACCGC
GTGGGCGTGGCCAAAGTGGTGATCCAGTCCAAGCAGCACCTGGCCGTGCTCATTCCGTGCGGCCGAGCGCTGATCCTCAA
CCTGCTGCGCTGGGGAGGGGAGATCCGCTCATTTGAGCAACTGGCCCTGCCGCCGCTGGATGCGAAAGCCGCGGGTATCA
AGGACGCGGAGCTGGCCATGGCCATGCAGCTCATCGAGGACATGACGCAGGAGTGGAACGCGGACCGCTTCCGCAATTCC
TTCTCTGAGGAGATCCACAGGCTGGTCGAGGCCAAGGCCTCTGCGGGAGAGATTGCCCATGTCGCTCAGCCGGATGAAGG
ACCGGCGGTGGCTGCGGGCGCGGAGGTGCTGGACCTCACCGCGTTGCTCAAGCGCAGCCTGGAGGGCGCCTCGGCCACCC
CGCCGCGCAAGGACAAACCCGCCTCCGTGACCCGCCTTGCACCGTCGGGTAAGGCGGCGGCCAAATCCACCGCCGCCAAA
AAGTCACCGGCCCGCAAGACTGCGGCCAAGGCGGCGCCTGCCAAGACCGCTGCGGCCAAGAAGCCTCGTCGCGCGCACGG
ATAG

Upstream 100 bases:

>100_bases
GCACGCTGTTTGAAACCCATGGATAGGCCGGAGATTCCACCACGATAGAAGCAACCGCTGTCCTACATCTGCGCCCCTGC
GCCATGGATAGCGTTTGCAC

Downstream 100 bases:

>100_bases
CGGTGCCGGACAAGGCGACGGACCATGCCCCGCAAAGACCCGCTGGCGGCGTACAAACAAAAGCGCAACTTTGCCGTGAC
GCCAGAGCCCGCGGACGGCG

Product: ku protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MRSKQPTASDALPSGAKQGQGKAPTSTRTLWKGAISFGLVHIPVGLYSATVSSGIDFDWLDRRSMEPVGYKRVNKITGKE
IATADIVKGVEYEEGRYVILTPEEIATAFPKVTQTIEIEAFLNADEIPFVYLERPYYTAPLKRGEKVYALLREALRQSNR
VGVAKVVIQSKQHLAVLIPCGRALILNLLRWGGEIRSFEQLALPPLDAKAAGIKDAELAMAMQLIEDMTQEWNADRFRNS
FSEEIHRLVEAKASAGEIAHVAQPDEGPAVAAGAEVLDLTALLKRSLEGASATPPRKDKPASVTRLAPSGKAAAKSTAAK
KSPARKTAAKAAPAKTAAAKKPRRAHG

Sequences:

>Translated_347_residues
MRSKQPTASDALPSGAKQGQGKAPTSTRTLWKGAISFGLVHIPVGLYSATVSSGIDFDWLDRRSMEPVGYKRVNKITGKE
IATADIVKGVEYEEGRYVILTPEEIATAFPKVTQTIEIEAFLNADEIPFVYLERPYYTAPLKRGEKVYALLREALRQSNR
VGVAKVVIQSKQHLAVLIPCGRALILNLLRWGGEIRSFEQLALPPLDAKAAGIKDAELAMAMQLIEDMTQEWNADRFRNS
FSEEIHRLVEAKASAGEIAHVAQPDEGPAVAAGAEVLDLTALLKRSLEGASATPPRKDKPASVTRLAPSGKAAAKSTAAK
KSPARKTAAKAAPAKTAAAKKPRRAHG
>Mature_347_residues
MRSKQPTASDALPSGAKQGQGKAPTSTRTLWKGAISFGLVHIPVGLYSATVSSGIDFDWLDRRSMEPVGYKRVNKITGKE
IATADIVKGVEYEEGRYVILTPEEIATAFPKVTQTIEIEAFLNADEIPFVYLERPYYTAPLKRGEKVYALLREALRQSNR
VGVAKVVIQSKQHLAVLIPCGRALILNLLRWGGEIRSFEQLALPPLDAKAAGIKDAELAMAMQLIEDMTQEWNADRFRNS
FSEEIHRLVEAKASAGEIAHVAQPDEGPAVAAGAEVLDLTALLKRSLEGASATPPRKDKPASVTRLAPSGKAAAKSTAAK
KSPARKTAAKAAPAKTAAAKKPRRAHG

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 37424; Mature: 37424

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSKQPTASDALPSGAKQGQGKAPTSTRTLWKGAISFGLVHIPVGLYSATVSSGIDFDWL
CCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
DRRSMEPVGYKRVNKITGKEIATADIVKGVEYEEGRYVILTPEEIATAFPKVTQTIEIEA
CCCCCCCCCHHHHHHHCCCHHHHHHHHCCCEECCCCEEEECHHHHHHHHHHHHHEEEEEE
FLNADEIPFVYLERPYYTAPLKRGEKVYALLREALRQSNRVGVAKVVIQSKQHLAVLIPC
EECCCCCCEEEEECCEEECCHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECC
GRALILNLLRWGGEIRSFEQLALPPLDAKAAGIKDAELAMAMQLIEDMTQEWNADRFRNS
CHHHHHHHHHHCCHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
FSEEIHRLVEAKASAGEIAHVAQPDEGPAVAAGAEVLDLTALLKRSLEGASATPPRKDKP
HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
ASVTRLAPSGKAAAKSTAAKKSPARKTAAKAAPAKTAAAKKPRRAHG
CCEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MRSKQPTASDALPSGAKQGQGKAPTSTRTLWKGAISFGLVHIPVGLYSATVSSGIDFDWL
CCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
DRRSMEPVGYKRVNKITGKEIATADIVKGVEYEEGRYVILTPEEIATAFPKVTQTIEIEA
CCCCCCCCCHHHHHHHCCCHHHHHHHHCCCEECCCCEEEECHHHHHHHHHHHHHEEEEEE
FLNADEIPFVYLERPYYTAPLKRGEKVYALLREALRQSNRVGVAKVVIQSKQHLAVLIPC
EECCCCCCEEEEECCEEECCHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECC
GRALILNLLRWGGEIRSFEQLALPPLDAKAAGIKDAELAMAMQLIEDMTQEWNADRFRNS
CHHHHHHHHHHCCHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
FSEEIHRLVEAKASAGEIAHVAQPDEGPAVAAGAEVLDLTALLKRSLEGASATPPRKDKP
HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
ASVTRLAPSGKAAAKSTAAKKSPARKTAAKAAPAKTAAAKKPRRAHG
CCEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]