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The map label for this gene is traG [H]

Identifier: 222110517

GI number: 222110517

Start: 1375630

End: 1377642

Strand: Direct

Name: traG [H]

Synonym: Dtpsy_1316

Alternate gene names: 222110517

Gene position: 1375630-1377642 (Clockwise)

Preceding gene: 222110516

Following gene: 222110518

Centisome position: 36.23

GC content: 65.08

Gene sequence:

>2013_bases
ATGCAAGGGACGAACGTGCTGTTCGGTCAGATCGCCGTGGTATTCGGCATCGTGATCGCCGGAGTGTGGAGCGCCACACA
ATGGACAGCAGCAGCCCTTGGCTATCAGCTACGCCTTGGCTCGCCCTGGTTCGATCTTCTCGGCACACCGATCTACCACC
CCTGGAAGCTGTTCGAGTGGTGGTTCTTCTTCGATGCCTACGCACCCCGCGTCTTTGACACGGGCGGGGCCATCGCGGGC
GGCAGCGGCCTGGTGGCCGTGCTGGTCGCTATCGGCATGTCAATCTGGCGCTCGCGGCAGTCGCGCCTGGTCACGACCTA
CGGTACGGCACGCTGGGCGAATGCGCAGGATATTCGCAAGGCCGGCCTCACGCAGCCGACCGGCGTGTTCCTCGGCCAGC
ATGATCGCCAATACCTGCGCCACGAAGGTCCGGAACACGTCCTGACCTTCGCGCCCACGCGCTCGGGCAAAGGCGTCGGG
CTGGTCGTTCCCACGCTGCTTTCGTGGCCCACGTCGGCCGTCATCCACGACATCAAGGGCGAGAACTGGCAGATCACCGC
AGGTTGGCGCTCGCGCTTCTCGCACTGTCTGTTGTTCAACCCCACTGATGCAACGTCAGCAGCCTACAACCCGCTACTGG
AGGTACGTCGCGGCGCGAATGAGGTGCGCGACGTGCAGAACATCGCGGACATTCTGGTTGACCCCGAAGGTGCGCTGGAG
AAGCGCAACCATTGGGAAAAGACTTCGCATGCGCTGCTGGTCGGCGCGATCCTGCATGTGCTGTACGCGGGCGAAGACAA
GACGCTACGAGGTGTGGCGAACTTCCTCAGTGACCCGGCGTGCCCATTCGAGCTGACCTTGCACCGGATGATGACCACGC
CGCACCTGGGCGATGGCCCGCATCCCGTGGTTGCATCAGCGGCGCGCGAAGTGCTCAACAAGAGCGACAACGAACGGTCT
GGCGTTCTCTCCACGGCCATGTCGTTCCTTGGCCTTTACCGTGACCCCACGGTGGCCGAAGTCACCTCGCGCTGCGACTG
GCGCATCGCCGACCTGATCGCTGCCGAGCATCCGGTATCGCTGTACCTCGTGGTGCCGCCTTCGGACATTAGCCGCACCA
AGCCGCTGATCCGCCTGATCCTCAACCAGATCGGCCGACGGCTGACCGAATCGCTCGACGGGTCGGATGGCATCGAACGC
CGCCACAAGCTGCTGCTGATGCTGGATGAGTTCCCGGCGCTGGGGCGCCTGGACTTCTTCGAGACGGCGCTGGCCTTCAT
GGCGGGCTACGGCATCCGCAGCTTTCTCATCGCGCAATCACTCAACCAGATTGACAAAGCCTACGGCCAAAACCATTCCA
TCCTCGACAACTGCCATGTCCGAGTGACGTTCGCAACCAACGACGAACGCACGGCCAAGCGTATTTCCGAAACCCTGGGA
ACGGCCACCGAGCTGCGCGCGCAGCGCAACTACGCCGGCCATCGGCTCGCGCCATGGCTCGGGCACCTCATGGTGTCGCG
GCAGGAAACGGCACCACGTGCCGCTGCGCACGCGCCAGGGCGTGGTGTCCATGACCGATCTGGTGCGTTCCTCGATGCGC
CTGCGCCCGGATCGCGTCGTGGTGGGCGAGGTGCGCGGCCCCGAGGCGCTGGATCTCATCAAGGTCTGGGGCACGGGTCA
CCCCGGCGGTATCGCCACGATCCATGCCGGCTCCGCCTTGGGCGCGCTGCTGCGCCTGGAGCAACTGATTCTCGAAGTGG
CCGCGAACCCGCCGCGTGCGCTGATCGCCGAGGCGGTCAACGTGGTGATCCACATTGCCGGGCGCGGGCGCAAGCGCCGC
ATCGAGAGCATCGCCCGCGTCGTCGGCTTCGACGGCGTGGGCTACCGATTGGTGGACGGTTTGGCGGACGCGATGGACAC
GCCGTTTCCCGAGCTACCGCCCGTTTCCGATGCCGCGCCCGCTGCGGCGACTTCCCCATCCCGTCCCTCAATCCCTCTGG
AGAACTGCCATGA

Upstream 100 bases:

>100_bases
TTGACCGACACTGACCCGGCACCGATCCTGACGCCTGCGGCACGTCCTTGTGCCGCTTCTTCCATTAGGAATCAGCGCAG
AAGAAATCGGAGGCTAGGTC

Downstream 100 bases:

>100_bases
CGCATGTTGATGCTTTCCGTATTTCCGTAAGTCCGCTTTTCCACCTGTCCCGATTCACGCGGCTACGCAGCCTGGCTCCC
CCTGCGGGGCAAGGGCTGCT

Product: trag family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 670; Mature: 670

Protein sequence:

>670_residues
MQGTNVLFGQIAVVFGIVIAGVWSATQWTAAALGYQLRLGSPWFDLLGTPIYHPWKLFEWWFFFDAYAPRVFDTGGAIAG
GSGLVAVLVAIGMSIWRSRQSRLVTTYGTARWANAQDIRKAGLTQPTGVFLGQHDRQYLRHEGPEHVLTFAPTRSGKGVG
LVVPTLLSWPTSAVIHDIKGENWQITAGWRSRFSHCLLFNPTDATSAAYNPLLEVRRGANEVRDVQNIADILVDPEGALE
KRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPACPFELTLHRMMTTPHLGDGPHPVVASAAREVLNKSDNERS
GVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIAAEHPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIER
RHKLLLMLDEFPALGRLDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLG
TATELRAQRNYAGHRLAPWLGHLMVSRQETAPRAAAHAPGRGVHDRSGAFLDAPAPGSRRGGRGARPRGAGSHQGLGHGS
PRRYRHDPCRLRLGRAAAPGATDSRSGREPAACADRRGGQRGDPHCRARAQAPHREHRPRRRLRRRGLPIGGRFGGRDGH
AVSRATARFRCRARCGDFPIPSLNPSGELP

Sequences:

>Translated_670_residues
MQGTNVLFGQIAVVFGIVIAGVWSATQWTAAALGYQLRLGSPWFDLLGTPIYHPWKLFEWWFFFDAYAPRVFDTGGAIAG
GSGLVAVLVAIGMSIWRSRQSRLVTTYGTARWANAQDIRKAGLTQPTGVFLGQHDRQYLRHEGPEHVLTFAPTRSGKGVG
LVVPTLLSWPTSAVIHDIKGENWQITAGWRSRFSHCLLFNPTDATSAAYNPLLEVRRGANEVRDVQNIADILVDPEGALE
KRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPACPFELTLHRMMTTPHLGDGPHPVVASAAREVLNKSDNERS
GVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIAAEHPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIER
RHKLLLMLDEFPALGRLDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLG
TATELRAQRNYAGHRLAPWLGHLMVSRQETAPRAAAHAPGRGVHDRSGAFLDAPAPGSRRGGRGARPRGAGSHQGLGHGS
PRRYRHDPCRLRLGRAAAPGATDSRSGREPAACADRRGGQRGDPHCRARAQAPHREHRPRRRLRRRGLPIGGRFGGRDGH
AVSRATARFRCRARCGDFPIPSLNPSGELP
>Mature_670_residues
MQGTNVLFGQIAVVFGIVIAGVWSATQWTAAALGYQLRLGSPWFDLLGTPIYHPWKLFEWWFFFDAYAPRVFDTGGAIAG
GSGLVAVLVAIGMSIWRSRQSRLVTTYGTARWANAQDIRKAGLTQPTGVFLGQHDRQYLRHEGPEHVLTFAPTRSGKGVG
LVVPTLLSWPTSAVIHDIKGENWQITAGWRSRFSHCLLFNPTDATSAAYNPLLEVRRGANEVRDVQNIADILVDPEGALE
KRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPACPFELTLHRMMTTPHLGDGPHPVVASAAREVLNKSDNERS
GVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIAAEHPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIER
RHKLLLMLDEFPALGRLDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLG
TATELRAQRNYAGHRLAPWLGHLMVSRQETAPRAAAHAPGRGVHDRSGAFLDAPAPGSRRGGRGARPRGAGSHQGLGHGS
PRRYRHDPCRLRLGRAAAPGATDSRSGREPAACADRRGGQRGDPHCRARAQAPHREHRPRRRLRRRGLPIGGRFGGRDGH
AVSRATARFRCRARCGDFPIPSLNPSGELP

Specific function: Required for conjugative transfer of plasmid RP4. Binds tightly and specifically to the relaxase traI. Can also bind to DNA without sequence specificity. May form a pore-like structure that could serve as a channel for DNA transfer [H]

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virD4/traG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003688 [H]

Pfam domain/function: PF02534 TraG [H]

EC number: NA

Molecular weight: Translated: 73651; Mature: 73651

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGTNVLFGQIAVVFGIVIAGVWSATQWTAAALGYQLRLGSPWFDLLGTPIYHPWKLFEW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHCCCCCCCHHHHHHH
WFFFDAYAPRVFDTGGAIAGGSGLVAVLVAIGMSIWRSRQSRLVTTYGTARWANAQDIRK
HHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHH
AGLTQPTGVFLGQHDRQYLRHEGPEHVLTFAPTRSGKGVGLVVPTLLSWPTSAVIHDIKG
HCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCEEHHHHHHCCCHHHHHHHCCC
ENWQITAGWRSRFSHCLLFNPTDATSAAYNPLLEVRRGANEVRDVQNIADILVDPEGALE
CCEEEEECHHHHCCEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHH
KRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPACPFELTLHRMMTTPHLGDGP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCC
HPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIAAEHPVS
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCCCEE
LYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIERRHKLLLMLDEFPALGRLDFF
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCCCCCCHHHH
ETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEEECCCHHHHHHHHHHHC
TATELRAQRNYAGHRLAPWLGHLMVSRQETAPRAAAHAPGRGVHDRSGAFLDAPAPGSRR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEECCCCCCCC
GGRGARPRGAGSHQGLGHGSPRRYRHDPCRLRLGRAAAPGATDSRSGREPAACADRRGGQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCHHHHHHCCCC
RGDPHCRARAQAPHREHRPRRRLRRRGLPIGGRFGGRDGHAVSRATARFRCRARCGDFPI
CCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PSLNPSGELP
CCCCCCCCCC
>Mature Secondary Structure
MQGTNVLFGQIAVVFGIVIAGVWSATQWTAAALGYQLRLGSPWFDLLGTPIYHPWKLFEW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHCCCCCCCHHHHHHH
WFFFDAYAPRVFDTGGAIAGGSGLVAVLVAIGMSIWRSRQSRLVTTYGTARWANAQDIRK
HHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHH
AGLTQPTGVFLGQHDRQYLRHEGPEHVLTFAPTRSGKGVGLVVPTLLSWPTSAVIHDIKG
HCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCEEHHHHHHCCCHHHHHHHCCC
ENWQITAGWRSRFSHCLLFNPTDATSAAYNPLLEVRRGANEVRDVQNIADILVDPEGALE
CCEEEEECHHHHCCEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHH
KRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPACPFELTLHRMMTTPHLGDGP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCC
HPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIAAEHPVS
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCCCEE
LYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIERRHKLLLMLDEFPALGRLDFF
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCCCCCCHHHH
ETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEEECCCHHHHHHHHHHHC
TATELRAQRNYAGHRLAPWLGHLMVSRQETAPRAAAHAPGRGVHDRSGAFLDAPAPGSRR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEECCCCCCCC
GGRGARPRGAGSHQGLGHGSPRRYRHDPCRLRLGRAAAPGATDSRSGREPAACADRRGGQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCHHHHHHCCCC
RGDPHCRARAQAPHREHRPRRRLRRRGLPIGGRFGGRDGHAVSRATARFRCRARCGDFPI
CCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PSLNPSGELP
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1665997; 8021214; 11976307 [H]