Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is yxiE [H]

Identifier: 222110512

GI number: 222110512

Start: 1370404

End: 1370967

Strand: Direct

Name: yxiE [H]

Synonym: Dtpsy_1311

Alternate gene names: 222110512

Gene position: 1370404-1370967 (Clockwise)

Preceding gene: 222110511

Following gene: 222110513

Centisome position: 36.1

GC content: 62.23

Gene sequence:

>564_bases
ATGTATTCCCGATTTCTGGTGCCGCTGGACGGCAGTCCCACATCCTTCCTGGCGCTCGATCATGCGGCAGAACTGGCACG
CCTGAGCGGCGCCACCGTGATCTTGCTGCATATCGTCGAACCAACCCGCCACAGCACGGGTTTCGAACGTCCCGAGGTCT
ACATCAAGGATGTCCGCCCACGCTTCCTCGAAGCCGGCCAGGCGTTGCTGGATGAAGCTGCGAGTCGGCTTCGTCGGAAC
GGAATTGCCACAGAGACGGTGCTGCTTGAGAGCGGCACCGCACGCGTGTCGGAACAGATCGCACAGCAGGCCGAGGTGAG
CGATTGCGACTTGGTCATCCTGGGCACCCATGGGCGTCGCGGCATGAACCGGCTGCTGCTGGGCAGCGATGCAGAGCAAG
TGGCGCGCATCGCACCAGTTCCGGTAATGCTGGTGCGCCAGTCGAGCCGAGATGGTGACCAGACACGCTCAGCCGCACGG
ACGCCAGTCGAGGCCAGCGACAACGCCGGTACGCAACGCCGGCATCCAACTCGCGCAAACAAGCTAAAAAAACCACATGA
ATGA

Upstream 100 bases:

>100_bases
TGGCGATGAACGGTGGCCAGCACATGTCATGAGTCGGGAGAGCCCGCAGCCCTTGCGGGCGGTTTCCCGCGCGGCAGTCA
GCGCCTCCCGGAGGAGTTCC

Downstream 100 bases:

>100_bases
ACAAGCCCCTGAGGGCGTTCGCGCCGATCCTCCAAGTGGTGTCGAGCGTCTTATCGCCCATGTCAAAACCTTGGCCCCGG
TTCGCACCGCGGTGGTGCAC

Product: uspa domain-containing protein

Products: NA

Alternate protein names: USP YxiE [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MYSRFLVPLDGSPTSFLALDHAAELARLSGATVILLHIVEPTRHSTGFERPEVYIKDVRPRFLEAGQALLDEAASRLRRN
GIATETVLLESGTARVSEQIAQQAEVSDCDLVILGTHGRRGMNRLLLGSDAEQVARIAPVPVMLVRQSSRDGDQTRSAAR
TPVEASDNAGTQRRHPTRANKLKKPHE

Sequences:

>Translated_187_residues
MYSRFLVPLDGSPTSFLALDHAAELARLSGATVILLHIVEPTRHSTGFERPEVYIKDVRPRFLEAGQALLDEAASRLRRN
GIATETVLLESGTARVSEQIAQQAEVSDCDLVILGTHGRRGMNRLLLGSDAEQVARIAPVPVMLVRQSSRDGDQTRSAAR
TPVEASDNAGTQRRHPTRANKLKKPHE
>Mature_187_residues
MYSRFLVPLDGSPTSFLALDHAAELARLSGATVILLHIVEPTRHSTGFERPEVYIKDVRPRFLEAGQALLDEAASRLRRN
GIATETVLLESGTARVSEQIAQQAEVSDCDLVILGTHGRRGMNRLLLGSDAEQVARIAPVPVMLVRQSSRDGDQTRSAAR
TPVEASDNAGTQRRHPTRANKLKKPHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 20494; Mature: 20494

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSRFLVPLDGSPTSFLALDHAAELARLSGATVILLHIVEPTRHSTGFERPEVYIKDVRP
CCCCEEEECCCCCCCEEEHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHEECCCH
RFLEAGQALLDEAASRLRRNGIATETVLLESGTARVSEQIAQQAEVSDCDLVILGTHGRR
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCC
GMNRLLLGSDAEQVARIAPVPVMLVRQSSRDGDQTRSAARTPVEASDNAGTQRRHPTRAN
CCCCEECCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHH
KLKKPHE
CCCCCCC
>Mature Secondary Structure
MYSRFLVPLDGSPTSFLALDHAAELARLSGATVILLHIVEPTRHSTGFERPEVYIKDVRP
CCCCEEEECCCCCCCEEEHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHEECCCH
RFLEAGQALLDEAASRLRRNGIATETVLLESGTARVSEQIAQQAEVSDCDLVILGTHGRR
HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCC
GMNRLLLGSDAEQVARIAPVPVMLVRQSSRDGDQTRSAARTPVEASDNAGTQRRHPTRAN
CCCCEECCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHH
KLKKPHE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704263; 9384377 [H]