| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is yxiE [H]
Identifier: 222110512
GI number: 222110512
Start: 1370404
End: 1370967
Strand: Direct
Name: yxiE [H]
Synonym: Dtpsy_1311
Alternate gene names: 222110512
Gene position: 1370404-1370967 (Clockwise)
Preceding gene: 222110511
Following gene: 222110513
Centisome position: 36.1
GC content: 62.23
Gene sequence:
>564_bases ATGTATTCCCGATTTCTGGTGCCGCTGGACGGCAGTCCCACATCCTTCCTGGCGCTCGATCATGCGGCAGAACTGGCACG CCTGAGCGGCGCCACCGTGATCTTGCTGCATATCGTCGAACCAACCCGCCACAGCACGGGTTTCGAACGTCCCGAGGTCT ACATCAAGGATGTCCGCCCACGCTTCCTCGAAGCCGGCCAGGCGTTGCTGGATGAAGCTGCGAGTCGGCTTCGTCGGAAC GGAATTGCCACAGAGACGGTGCTGCTTGAGAGCGGCACCGCACGCGTGTCGGAACAGATCGCACAGCAGGCCGAGGTGAG CGATTGCGACTTGGTCATCCTGGGCACCCATGGGCGTCGCGGCATGAACCGGCTGCTGCTGGGCAGCGATGCAGAGCAAG TGGCGCGCATCGCACCAGTTCCGGTAATGCTGGTGCGCCAGTCGAGCCGAGATGGTGACCAGACACGCTCAGCCGCACGG ACGCCAGTCGAGGCCAGCGACAACGCCGGTACGCAACGCCGGCATCCAACTCGCGCAAACAAGCTAAAAAAACCACATGA ATGA
Upstream 100 bases:
>100_bases TGGCGATGAACGGTGGCCAGCACATGTCATGAGTCGGGAGAGCCCGCAGCCCTTGCGGGCGGTTTCCCGCGCGGCAGTCA GCGCCTCCCGGAGGAGTTCC
Downstream 100 bases:
>100_bases ACAAGCCCCTGAGGGCGTTCGCGCCGATCCTCCAAGTGGTGTCGAGCGTCTTATCGCCCATGTCAAAACCTTGGCCCCGG TTCGCACCGCGGTGGTGCAC
Product: uspa domain-containing protein
Products: NA
Alternate protein names: USP YxiE [H]
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MYSRFLVPLDGSPTSFLALDHAAELARLSGATVILLHIVEPTRHSTGFERPEVYIKDVRPRFLEAGQALLDEAASRLRRN GIATETVLLESGTARVSEQIAQQAEVSDCDLVILGTHGRRGMNRLLLGSDAEQVARIAPVPVMLVRQSSRDGDQTRSAAR TPVEASDNAGTQRRHPTRANKLKKPHE
Sequences:
>Translated_187_residues MYSRFLVPLDGSPTSFLALDHAAELARLSGATVILLHIVEPTRHSTGFERPEVYIKDVRPRFLEAGQALLDEAASRLRRN GIATETVLLESGTARVSEQIAQQAEVSDCDLVILGTHGRRGMNRLLLGSDAEQVARIAPVPVMLVRQSSRDGDQTRSAAR TPVEASDNAGTQRRHPTRANKLKKPHE >Mature_187_residues MYSRFLVPLDGSPTSFLALDHAAELARLSGATVILLHIVEPTRHSTGFERPEVYIKDVRPRFLEAGQALLDEAASRLRRN GIATETVLLESGTARVSEQIAQQAEVSDCDLVILGTHGRRGMNRLLLGSDAEQVARIAPVPVMLVRQSSRDGDQTRSAAR TPVEASDNAGTQRRHPTRANKLKKPHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 20494; Mature: 20494
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSRFLVPLDGSPTSFLALDHAAELARLSGATVILLHIVEPTRHSTGFERPEVYIKDVRP CCCCEEEECCCCCCCEEEHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHEECCCH RFLEAGQALLDEAASRLRRNGIATETVLLESGTARVSEQIAQQAEVSDCDLVILGTHGRR HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCC GMNRLLLGSDAEQVARIAPVPVMLVRQSSRDGDQTRSAARTPVEASDNAGTQRRHPTRAN CCCCEECCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHH KLKKPHE CCCCCCC >Mature Secondary Structure MYSRFLVPLDGSPTSFLALDHAAELARLSGATVILLHIVEPTRHSTGFERPEVYIKDVRP CCCCEEEECCCCCCCEEEHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHEECCCH RFLEAGQALLDEAASRLRRNGIATETVLLESGTARVSEQIAQQAEVSDCDLVILGTHGRR HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCC GMNRLLLGSDAEQVARIAPVPVMLVRQSSRDGDQTRSAARTPVEASDNAGTQRRHPTRAN CCCCEECCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHH KLKKPHE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377 [H]