Click here to switch to the map view.

The map label for this gene is phaC [H]

Identifier: 222110509

GI number: 222110509

Start: 1367270

End: 1369027

Strand: Direct

Name: phaC [H]

Synonym: Dtpsy_1308

Alternate gene names: 222110509

Gene position: 1367270-1369027 (Clockwise)

Preceding gene: 222110494

Following gene: 222110510

Centisome position: 36.01

GC content: 64.9

Gene sequence:

>1758_bases
ATGAGCAACGTCGCAACACACGGCAAGGCCGATCTGGCGCAGCCCGAAGCCTGTCGCCCTGACACCCTGGATACGCTTGC
GAACGCCTGGCGGGCGCGCAGCACGGGTGGGCTGTCACCGGCGGCCGGCCTGCTGGCCTGGTACGACTGGGCGTTGCACC
TGAGCCTTTCACCAGGCAAGCAACGCAGCTTGATCGAAAAGGGTTTGCACAAGCAGCAGCGCCTTGCGCGCTATGCCTTG
CGCGTTGCCAGTGCGCACGACTGCCCGACCTGCATCGAACCGCTGGAGCAGGATCGGCGCTTTGCCGCCCCGGCTTGGCA
GCAGTGGCCCTTCAACGTGATTCACCAGGGCTTTTTGCTGCAGCAGCAGTGGTGGCACAACGCCACCACGGGCGTGCGTG
GCGTGTCGCGCCATCACGAGAACATGGTCACTTTCGCCGGGCGGCAGTGGCTGGACATGTGGTCGCCTTCGAATTTCATC
TGGACCAACCCCGAGGTGCTGCACGCCATCACGCAAAGCGGGGGCGCAAACCTGTGGCGCGGCGCCATGAACTTTCTGGA
AGATGCAAGGCGCCTCGCGCTCGACGATGCGCCTGCAGGGGTCGAAGGGTTCGAGGTCGGCAAGGACGTGGCGGTCACCC
CAGGCAAGGTGGTGTTTCGAAACCACCTGATCGAGTTGATCCAGTACTCACCCACGACGCCGGATGTGCATGCGGAGCCG
GTACTGATCGTGCCGTCCTGGATCATGAAGTACTACATCCTCGACCTGTCGCCGCACAACTCGATGGTGAAGTACCTGGT
CGATCAGGGGCACACGGTGTTCATCCTTTCATGGAAGAACCCGACGGCGGCCGATCGTGACCTCGGCCTGGAGGACTACC
GCTGGCTGGGGGTCATGGACGCATTGGATGCGGTCACGGCCATCGTGCCCGAACGCAAGGTGCAGGCGGTCGGCTATTGC
CTGGGCGGCACCTTGCTCGCGATCGCCGCCGCCGCGATGGCGCGCGATGGCGACGAGCGTCTGCAAAGCCTGACGCTGCT
GGCATCGGAGACTGATTTCCGCGAGTCGGGCGAGATCGCGCTTTTCATCGACGACAGTCAACTGGCATGGCTGGAAGCCG
GCATGTGGGACAAGGGCTATCTCGACGGCAAGCAGATGGCTGGCGCGTTCCAGATGCTCAACTCACGCGACCTGATCTGG
TCGCGACGGGTGCGCGAATACCTGTTGGGTGAGCGTCAGACCTTCAATGACCTGATGGCCTGGAATGCCGACGTGACCCG
CATGCCGTACCGCATGCACAGCGAGTACCTGCGGCGCCTGTATCTGGACAACGACCTGGCCGAGGGGCGCTACCGCGTCG
GCGGGAGACCCGTGGCGCTGGCCGACATCGAGGTGCCCATGTTCATCGTCGGCACGGTGCGCGATCACGTCGCCCCCTGG
CCGTCCGTGTACAAGATGCACCTGCTCAGCGATGCGGAACTGACCTTTGTTCTCACCAGCGGGGGGCACAACGCCGGCGT
CGTCAGCGAGCCGGGACACCCCCGGCGCAGCTTCCAGATTGCGACCCGTGCGGCCGGCGATCGCTATATCGATCCGCAAC
TGTGGCGTGCCGAGACCCCGATGAACGAAGGCTCCTGGTGGCCGGCATGGCAGCAATGGCTGGCCCAGCGCTCTGCCGGG
CGCGTCGCGCCGCCTGCCATGGGCGGGACGCAAGCACCGCTTGGCGATGCGCCGGGAACCTATGTGGCCATGCGATGA

Upstream 100 bases:

>100_bases
TTTGGGTGGCTGAAAAATTTGGCGCCCCTGCGGAAGGCTTGCAACTTTTCCTGTAAGCGATAAGATAGTAATATGTTACT
CGCTAAATGAAGGGTTGGAG

Downstream 100 bases:

>100_bases
CAGGACAAAACACCGCCAAGAATACACCCTCAACTTTCATCGGGCCGTTGCGCAGCCATGGCCTACACCCGCCCCGGAGG
GGCACATCATGACCGTGGAG

Product: poly-beta-hydroxybutyrate polymerase domain-containing protein

Products: NA

Alternate protein names: PHA polymerase; PHA synthase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 585; Mature: 584

Protein sequence:

>585_residues
MSNVATHGKADLAQPEACRPDTLDTLANAWRARSTGGLSPAAGLLAWYDWALHLSLSPGKQRSLIEKGLHKQQRLARYAL
RVASAHDCPTCIEPLEQDRRFAAPAWQQWPFNVIHQGFLLQQQWWHNATTGVRGVSRHHENMVTFAGRQWLDMWSPSNFI
WTNPEVLHAITQSGGANLWRGAMNFLEDARRLALDDAPAGVEGFEVGKDVAVTPGKVVFRNHLIELIQYSPTTPDVHAEP
VLIVPSWIMKYYILDLSPHNSMVKYLVDQGHTVFILSWKNPTAADRDLGLEDYRWLGVMDALDAVTAIVPERKVQAVGYC
LGGTLLAIAAAAMARDGDERLQSLTLLASETDFRESGEIALFIDDSQLAWLEAGMWDKGYLDGKQMAGAFQMLNSRDLIW
SRRVREYLLGERQTFNDLMAWNADVTRMPYRMHSEYLRRLYLDNDLAEGRYRVGGRPVALADIEVPMFIVGTVRDHVAPW
PSVYKMHLLSDAELTFVLTSGGHNAGVVSEPGHPRRSFQIATRAAGDRYIDPQLWRAETPMNEGSWWPAWQQWLAQRSAG
RVAPPAMGGTQAPLGDAPGTYVAMR

Sequences:

>Translated_585_residues
MSNVATHGKADLAQPEACRPDTLDTLANAWRARSTGGLSPAAGLLAWYDWALHLSLSPGKQRSLIEKGLHKQQRLARYAL
RVASAHDCPTCIEPLEQDRRFAAPAWQQWPFNVIHQGFLLQQQWWHNATTGVRGVSRHHENMVTFAGRQWLDMWSPSNFI
WTNPEVLHAITQSGGANLWRGAMNFLEDARRLALDDAPAGVEGFEVGKDVAVTPGKVVFRNHLIELIQYSPTTPDVHAEP
VLIVPSWIMKYYILDLSPHNSMVKYLVDQGHTVFILSWKNPTAADRDLGLEDYRWLGVMDALDAVTAIVPERKVQAVGYC
LGGTLLAIAAAAMARDGDERLQSLTLLASETDFRESGEIALFIDDSQLAWLEAGMWDKGYLDGKQMAGAFQMLNSRDLIW
SRRVREYLLGERQTFNDLMAWNADVTRMPYRMHSEYLRRLYLDNDLAEGRYRVGGRPVALADIEVPMFIVGTVRDHVAPW
PSVYKMHLLSDAELTFVLTSGGHNAGVVSEPGHPRRSFQIATRAAGDRYIDPQLWRAETPMNEGSWWPAWQQWLAQRSAG
RVAPPAMGGTQAPLGDAPGTYVAMR
>Mature_584_residues
SNVATHGKADLAQPEACRPDTLDTLANAWRARSTGGLSPAAGLLAWYDWALHLSLSPGKQRSLIEKGLHKQQRLARYALR
VASAHDCPTCIEPLEQDRRFAAPAWQQWPFNVIHQGFLLQQQWWHNATTGVRGVSRHHENMVTFAGRQWLDMWSPSNFIW
TNPEVLHAITQSGGANLWRGAMNFLEDARRLALDDAPAGVEGFEVGKDVAVTPGKVVFRNHLIELIQYSPTTPDVHAEPV
LIVPSWIMKYYILDLSPHNSMVKYLVDQGHTVFILSWKNPTAADRDLGLEDYRWLGVMDALDAVTAIVPERKVQAVGYCL
GGTLLAIAAAAMARDGDERLQSLTLLASETDFRESGEIALFIDDSQLAWLEAGMWDKGYLDGKQMAGAFQMLNSRDLIWS
RRVREYLLGERQTFNDLMAWNADVTRMPYRMHSEYLRRLYLDNDLAEGRYRVGGRPVALADIEVPMFIVGTVRDHVAPWP
SVYKMHLLSDAELTFVLTSGGHNAGVVSEPGHPRRSFQIATRAAGDRYIDPQLWRAETPMNEGSWWPAWQQWLAQRSAGR
VAPPAMGGTQAPLGDAPGTYVAMR

Specific function: Unknown

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010963
- InterPro:   IPR010941 [H]

Pfam domain/function: PF07167 PhaC_N [H]

EC number: NA

Molecular weight: Translated: 65541; Mature: 65410

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVATHGKADLAQPEACRPDTLDTLANAWRARSTGGLSPAAGLLAWYDWALHLSLSPGK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEEEEECCCH
QRSLIEKGLHKQQRLARYALRVASAHDCPTCIEPLEQDRRFAAPAWQQWPFNVIHQGFLL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHH
QQQWWHNATTGVRGVSRHHENMVTFAGRQWLDMWSPSNFIWTNPEVLHAITQSGGANLWR
HHHHHCCCCHHHHHHHHHHCCHHHHCCHHHHHHCCCCCEEECCHHHHHHHHHCCCCHHHH
GAMNFLEDARRLALDDAPAGVEGFEVGKDVAVTPGKVVFRNHLIELIQYSPTTPDVHAEP
HHHHHHHHHHHHHCCCCCCCCCHHHCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC
VLIVPSWIMKYYILDLSPHNSMVKYLVDQGHTVFILSWKNPTAADRDLGLEDYRWLGVMD
EEECCHHHHEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
ALDAVTAIVPERKVQAVGYCLGGTLLAIAAAAMARDGDERLQSLTLLASETDFRESGEIA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEE
LFIDDSQLAWLEAGMWDKGYLDGKQMAGAFQMLNSRDLIWSRRVREYLLGERQTFNDLMA
EEEECCCEEEHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH
WNADVTRMPYRMHSEYLRRLYLDNDLAEGRYRVGGRPVALADIEVPMFIVGTVRDHVAPW
CCCCHHHCCHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECCCCEEEEEEHHHHCCCC
PSVYKMHLLSDAELTFVLTSGGHNAGVVSEPGHPRRSFQIATRAAGDRYIDPQLWRAETP
HHHHHHHEECCCEEEEEEECCCCCCCCCCCCCCCCHHEEEHHHCCCCCCCCCHHHCCCCC
MNEGSWWPAWQQWLAQRSAGRVAPPAMGGTQAPLGDAPGTYVAMR
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure 
SNVATHGKADLAQPEACRPDTLDTLANAWRARSTGGLSPAAGLLAWYDWALHLSLSPGK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEEEEECCCH
QRSLIEKGLHKQQRLARYALRVASAHDCPTCIEPLEQDRRFAAPAWQQWPFNVIHQGFLL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHH
QQQWWHNATTGVRGVSRHHENMVTFAGRQWLDMWSPSNFIWTNPEVLHAITQSGGANLWR
HHHHHCCCCHHHHHHHHHHCCHHHHCCHHHHHHCCCCCEEECCHHHHHHHHHCCCCHHHH
GAMNFLEDARRLALDDAPAGVEGFEVGKDVAVTPGKVVFRNHLIELIQYSPTTPDVHAEP
HHHHHHHHHHHHHCCCCCCCCCHHHCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC
VLIVPSWIMKYYILDLSPHNSMVKYLVDQGHTVFILSWKNPTAADRDLGLEDYRWLGVMD
EEECCHHHHEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
ALDAVTAIVPERKVQAVGYCLGGTLLAIAAAAMARDGDERLQSLTLLASETDFRESGEIA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEE
LFIDDSQLAWLEAGMWDKGYLDGKQMAGAFQMLNSRDLIWSRRVREYLLGERQTFNDLMA
EEEECCCEEEHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH
WNADVTRMPYRMHSEYLRRLYLDNDLAEGRYRVGGRPVALADIEVPMFIVGTVRDHVAPW
CCCCHHHCCHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECCCCEEEEEEHHHHCCCC
PSVYKMHLLSDAELTFVLTSGGHNAGVVSEPGHPRRSFQIATRAAGDRYIDPQLWRAETP
HHHHHHHEECCCEEEEEEECCCCCCCCCCCCCCCCHHEEEHHHCCCCCCCCCHHHCCCCC
MNEGSWWPAWQQWLAQRSAGRVAPPAMGGTQAPLGDAPGTYVAMR
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7763712 [H]