| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110492
Identifier: 222110492
GI number: 222110492
Start: 1347565
End: 1348110
Strand: Direct
Name: 222110492
Synonym: Dtpsy_1291
Alternate gene names: NA
Gene position: 1347565-1348110 (Clockwise)
Preceding gene: 222110491
Following gene: 222110493
Centisome position: 35.49
GC content: 70.51
Gene sequence:
>546_bases ATGAACGCATCCGCTCTACCTGCGGCGCACGCGGCCACGGCTGCGCCGTTGCGCGCGCCTTCGGTACTCGCTGGCCTCGT CGGCAGCGTGCCGCTGACGCGCGTTTCGCTGGCCTACATCGAACCGCGTTTCAAGCTCTACCTGCGCTTCGGCGAACCGG CGCGCACGCTTCAGCTCGACCGCTGGCGGCGCTGCGCGGTGTTCCTGCCGAACGCGGTTTTCTGCCGCATCCGCTGGCAG GCCAACGACTACGGCACGATCCGCTGGCAGCTCATGGTGATGCAGGCTGCCACGCCGCTGGACGCCGTGCAGCGCATCCC CGGCGTGCAGCCCGGCGCGCGCCTGATGCTGCACGCCGAAGGCGAGAACGCGGTGCGTGCCGTGCTGGAACGCATCGACG GCATCGACGCGCAGGGCATTGCCGCCATCGACGTGTCACCCGCGTACTGGCGCACTCTGGGCAACCGTCTGGCGGCCCGT CTGCCGCTGCCCGAATACACCACCGAGCGGCACGCCGCTTGGCTGGCCGGGAGGGCGCTGCCATGA
Upstream 100 bases:
>100_bases TGCGCGCTCGTATCAAGGTGTCGGCCTTCACGCAAGGCGTGACCGTTGCCGACTTGCTGCGCGGCCTGCTGGAGCGGGAG TTTCCCCCGGAGAAGACACC
Downstream 100 bases:
>100_bases CCGCTCACTCCACCACCGCGCGCACGCCCGAAGCCGCGCCGCGTCCTCGCTCGCGCCTGCGTGCTCGCATCGTGCTGGCG GGCCTGTCCGCCTGCGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MNASALPAAHAATAAPLRAPSVLAGLVGSVPLTRVSLAYIEPRFKLYLRFGEPARTLQLDRWRRCAVFLPNAVFCRIRWQ ANDYGTIRWQLMVMQAATPLDAVQRIPGVQPGARLMLHAEGENAVRAVLERIDGIDAQGIAAIDVSPAYWRTLGNRLAAR LPLPEYTTERHAAWLAGRALP
Sequences:
>Translated_181_residues MNASALPAAHAATAAPLRAPSVLAGLVGSVPLTRVSLAYIEPRFKLYLRFGEPARTLQLDRWRRCAVFLPNAVFCRIRWQ ANDYGTIRWQLMVMQAATPLDAVQRIPGVQPGARLMLHAEGENAVRAVLERIDGIDAQGIAAIDVSPAYWRTLGNRLAAR LPLPEYTTERHAAWLAGRALP >Mature_181_residues MNASALPAAHAATAAPLRAPSVLAGLVGSVPLTRVSLAYIEPRFKLYLRFGEPARTLQLDRWRRCAVFLPNAVFCRIRWQ ANDYGTIRWQLMVMQAATPLDAVQRIPGVQPGARLMLHAEGENAVRAVLERIDGIDAQGIAAIDVSPAYWRTLGNRLAAR LPLPEYTTERHAAWLAGRALP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19900; Mature: 19900
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASALPAAHAATAAPLRAPSVLAGLVGSVPLTRVSLAYIEPRFKLYLRFGEPARTLQLD CCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCHHHEEHEEECCEEEEEEEECCCCHHEEHH RWRRCAVFLPNAVFCRIRWQANDYGTIRWQLMVMQAATPLDAVQRIPGVQPGARLMLHAE HHCEEEEECCCEEEEEEEEECCCCCEEEEEEEEEECCCCHHHHHHCCCCCCCCEEEEEEC GENAVRAVLERIDGIDAQGIAAIDVSPAYWRTLGNRLAARLPLPEYTTERHAAWLAGRAL CCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC P C >Mature Secondary Structure MNASALPAAHAATAAPLRAPSVLAGLVGSVPLTRVSLAYIEPRFKLYLRFGEPARTLQLD CCCCCCCCHHHHCCCCCCCHHHHHHHHCCCCHHHEEHEEECCEEEEEEEECCCCHHEEHH RWRRCAVFLPNAVFCRIRWQANDYGTIRWQLMVMQAATPLDAVQRIPGVQPGARLMLHAE HHCEEEEECCCEEEEEEEEECCCCCEEEEEEEEEECCCCHHHHHHCCCCCCCCEEEEEEC GENAVRAVLERIDGIDAQGIAAIDVSPAYWRTLGNRLAARLPLPEYTTERHAAWLAGRAL CCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA