Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

Click here to switch to the map view.

The map label for this gene is 222110486

Identifier: 222110486

GI number: 222110486

Start: 1343748

End: 1344098

Strand: Direct

Name: 222110486

Synonym: Dtpsy_1285

Alternate gene names: NA

Gene position: 1343748-1344098 (Clockwise)

Preceding gene: 222110482

Following gene: 222110487

Centisome position: 35.39

GC content: 72.08

Gene sequence:

>351_bases
ATGCCCCAGCCGCTTGCCACCGACCCGGAGCGCGCGCAACTGCTCGCCAACGGCGAGGCCCGTGCCGCTGGCGAGGCCAT
CGACCCGATGCCCGTGGTGCGCCTGTTCACGCCGGACGCGCATGTGACCTGGCTGCTGGCGGCGCTCGACCCGGCCGATG
GCGACACCGCCTGGGGCCTCATCGACCTGGGGATCGGGATGCCAGCGCAGGGCACTGTCAAGCTGTCCGAGCTGGCCGGC
ATCGTCGGGCCGCGCCAGCAGCCCGTGCTACGCGACCTCTATTTCCGTCCCACGCGCACGCTGTCGGAATACACCCGGCT
GGCCGAGCGCGACGGAGCGATCCCGGACTGA

Upstream 100 bases:

>100_bases
CATTCGCACTTGCGCACGAAGGCGTAAACCCGGTTTGGTGGTTCCGCGCTTTGGCGCGAAACCGCATCCGTGCAACATTG
GATTTGTGGGATTACCGACC

Downstream 100 bases:

>100_bases
ATACGTCCTACTGTGACTTTTTCAGTCTGGTGTCATACCGGGTAAGTCTCAATCGAGATTCTTGCGGCGTAGCCCCACCA
GTCTGACCCAAATAGACAGG

Product: lipoprotein

Products: NA

Alternate protein names: Transposon

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MPQPLATDPERAQLLANGEARAAGEAIDPMPVVRLFTPDAHVTWLLAALDPADGDTAWGLIDLGIGMPAQGTVKLSELAG
IVGPRQQPVLRDLYFRPTRTLSEYTRLAERDGAIPD

Sequences:

>Translated_116_residues
MPQPLATDPERAQLLANGEARAAGEAIDPMPVVRLFTPDAHVTWLLAALDPADGDTAWGLIDLGIGMPAQGTVKLSELAG
IVGPRQQPVLRDLYFRPTRTLSEYTRLAERDGAIPD
>Mature_115_residues
PQPLATDPERAQLLANGEARAAGEAIDPMPVVRLFTPDAHVTWLLAALDPADGDTAWGLIDLGIGMPAQGTVKLSELAGI
VGPRQQPVLRDLYFRPTRTLSEYTRLAERDGAIPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12470; Mature: 12339

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQPLATDPERAQLLANGEARAAGEAIDPMPVVRLFTPDAHVTWLLAALDPADGDTAWGL
CCCCCCCCHHHHHEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEE
IDLGIGMPAQGTVKLSELAGIVGPRQQPVLRDLYFRPTRTLSEYTRLAERDGAIPD
EECCCCCCCCCCEEHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PQPLATDPERAQLLANGEARAAGEAIDPMPVVRLFTPDAHVTWLLAALDPADGDTAWGL
CCCCCCCHHHHHEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCEE
IDLGIGMPAQGTVKLSELAGIVGPRQQPVLRDLYFRPTRTLSEYTRLAERDGAIPD
EECCCCCCCCCCEEHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA