| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is cinA [C]
Identifier: 222110321
GI number: 222110321
Start: 1161236
End: 1162057
Strand: Direct
Name: cinA [C]
Synonym: Dtpsy_1108
Alternate gene names: 222110321
Gene position: 1161236-1162057 (Clockwise)
Preceding gene: 222110320
Following gene: 222110322
Centisome position: 30.59
GC content: 65.21
Gene sequence:
>822_bases ATGACACCGGCTTTCGGCCTCATCATCGTTGGCGATGAAATCCTCTCGGGCAAGCGGGCGGACAAGCACCTCGCCAAGGT CATCGAGCTGCTTGCGGCACGCGGGCTTGCGCTGTCCTATGCGGACTACGTAGGCGACGACCGTCCGCGCATCACGGCGG CGCTGCAGCGGGCCTTTGCCTCGTCGGACATCGTGTTCAGTTGCGGCGGCATTGGTGCCACTCCCGACGACCACACGCGC CAGTGCGCGGCGGCCGCATTGCAACGCCCGCTGGTCCTGCACCCCGAGGCCAAGCGCCTGATCACCGAGCGCATGCAGGA TGTGGCACGGGAGCAGGGCGAGGCGTTCGACCCCGACCGCGCCGACAATCTGCATCGGCTGAACATGGGCGTTTTTCCTG AGGGCGCGCGCATCATTCCCAACCCTTACAACAAAATCCCCGGCTTCTCGTGTGACGGCCCTGGGGGCGGCATGGTGCAT TTCGTGCCGGGGTTCCCGGTCATGGCTTGGCCTATGGTGGACTGGGCACTCCAGCATTACTGTGCCCCGTGGTTCAACCA GCAGCCGCAGATGGAGCGCTCCGTCGTGCTTTACGGCGCGATGGAAGCCGCGCTGACCCAGCTCATGGAGCGGATCGAGG CCGGACACCCGGGGATCAAGGTGTTCAGCCTGCCGAGCGTGGACCATCCGGTGCACGGGCGCCATGTGGAATTGGGCGTC AAGGGGGCCGCTGCCTTGGTGCCTGCCGCGTGGCAGGCGCTGCAGGAAGGTTTGCACCAAACAGGTGCATCCATGGGCCC TGAAATGGTGCGCAAATGGTAA
Upstream 100 bases:
>100_bases AGCAGCGAGGCGAACGCCCGCCGGGCGATACGCCTGCAACCGCCGCGCCCGCAACGCCAGCGCCTTCTTTGCCATCCTCG TCTCAGCTGCAGGACAACCC
Downstream 100 bases:
>100_bases GAAGGTGGGCCACTTAAAATCCTGCACGCGATTGGTGCGCCGCCGCAGGGCTCTGCGCCCGGCTTGCCCCGTACGGGTGT CCCCATTCGCTGGCACGCAA
Product: molybdopterin-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MTPAFGLIIVGDEILSGKRADKHLAKVIELLAARGLALSYADYVGDDRPRITAALQRAFASSDIVFSCGGIGATPDDHTR QCAAAALQRPLVLHPEAKRLITERMQDVAREQGEAFDPDRADNLHRLNMGVFPEGARIIPNPYNKIPGFSCDGPGGGMVH FVPGFPVMAWPMVDWALQHYCAPWFNQQPQMERSVVLYGAMEAALTQLMERIEAGHPGIKVFSLPSVDHPVHGRHVELGV KGAAALVPAAWQALQEGLHQTGASMGPEMVRKW
Sequences:
>Translated_273_residues MTPAFGLIIVGDEILSGKRADKHLAKVIELLAARGLALSYADYVGDDRPRITAALQRAFASSDIVFSCGGIGATPDDHTR QCAAAALQRPLVLHPEAKRLITERMQDVAREQGEAFDPDRADNLHRLNMGVFPEGARIIPNPYNKIPGFSCDGPGGGMVH FVPGFPVMAWPMVDWALQHYCAPWFNQQPQMERSVVLYGAMEAALTQLMERIEAGHPGIKVFSLPSVDHPVHGRHVELGV KGAAALVPAAWQALQEGLHQTGASMGPEMVRKW >Mature_272_residues TPAFGLIIVGDEILSGKRADKHLAKVIELLAARGLALSYADYVGDDRPRITAALQRAFASSDIVFSCGGIGATPDDHTRQ CAAAALQRPLVLHPEAKRLITERMQDVAREQGEAFDPDRADNLHRLNMGVFPEGARIIPNPYNKIPGFSCDGPGGGMVHF VPGFPVMAWPMVDWALQHYCAPWFNQQPQMERSVVLYGAMEAALTQLMERIEAGHPGIKVFSLPSVDHPVHGRHVELGVK GAAALVPAAWQALQEGLHQTGASMGPEMVRKW
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Escherichia coli, GI1788583, Length=235, Percent_Identity=25.1063829787234, Blast_Score=62, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323832, Length=172, Percent_Identity=27.906976744186, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR020817 - InterPro: IPR001453 [H]
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 29698; Mature: 29566
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAFGLIIVGDEILSGKRADKHLAKVIELLAARGLALSYADYVGDDRPRITAALQRAFA CCCCEEEEEECHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHC SSDIVFSCGGIGATPDDHTRQCAAAALQRPLVLHPEAKRLITERMQDVAREQGEAFDPDR CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCC ADNLHRLNMGVFPEGARIIPNPYNKIPGFSCDGPGGGMVHFVPGFPVMAWPMVDWALQHY CCCEEEECCCCCCCCCEECCCCHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH CAPWFNQQPQMERSVVLYGAMEAALTQLMERIEAGHPGIKVFSLPSVDHPVHGRHVELGV HCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECC KGAAALVPAAWQALQEGLHQTGASMGPEMVRKW CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC >Mature Secondary Structure TPAFGLIIVGDEILSGKRADKHLAKVIELLAARGLALSYADYVGDDRPRITAALQRAFA CCCEEEEEECHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHC SSDIVFSCGGIGATPDDHTRQCAAAALQRPLVLHPEAKRLITERMQDVAREQGEAFDPDR CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCC ADNLHRLNMGVFPEGARIIPNPYNKIPGFSCDGPGGGMVHFVPGFPVMAWPMVDWALQHY CCCEEEECCCCCCCCCEECCCCHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH CAPWFNQQPQMERSVVLYGAMEAALTQLMERIEAGHPGIKVFSLPSVDHPVHGRHVELGV HCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEECC KGAAALVPAAWQALQEGLHQTGASMGPEMVRKW CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA